Bemisia tabaci (sweet potato whitefly): 109030230
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Entry
109030230 CDS
T06019
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
btab
Bemisia tabaci (sweet potato whitefly)
Pathway
btab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
btab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109030230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
btab03041
]
109030230
Spliceosome [BR:
btab03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
109030230
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_Gbeta
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_EML
PRP4
NBCH_WD40
ANAPC4_WD40
Beta-prop_Aladin
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_WDR41
Beta-prop_IFT122_1st
WD40_like
Nbas_N
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
109030230
NCBI-ProteinID:
XP_018896626
UniProt:
A0A9P0F901
LinkDB
All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
MSDDEDILYIKKQKTSHYGPLDDKLRPTSMDHDESSQDSSKGMDMDNIHISNEYMDLEDD
MDRDKQALREEFERRRKARQVNVSTDDSEVKTSLRQLGEPICLFGEGPAERRNRLRDLLS
RLGEDAIKKKQEAEEERIQQEKDQETTWYHEGPEALKSARSWIAAFSLQRAKQRLEKARA
TVLNNETATTARKQELHKRLTSLSIYCSQIGDTRPITFCSFSPNSQLLATCSWSGLMKLW
SIPDCEQQHTFKGHEGFVGCVKFHPKATIADTQNTCELASCGYDGSVKLWSMDRETAIAD
LTGHDARVSRVAFHPSGRFLGTCCFDHSWRLWDLESTQEVLHQEGHCQPVYSIAFQNDGS
VAATGGMDAFGRVWDLRTGRCIMFMEGHLKSIYGVDFSPNGYIMATGSEDNSCRIWDLRK
VACVYTIPAHMNLVSHVKFQEDEGHFLVTASYDNTAKIWSNKTWQPMKTLSGHYGKVMGM
DVSPDSKFIATCSYDRTYKLWAPE
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgatgaagatattttatatattaagaaacaaaaaacctcccattatggacct
ctggatgacaagctccgaccaacatccatggaccatgatgaatcttcccaagactcttcg
aagggcatggatatggacaatattcacatttctaatgagtatatggatttggaagatgac
atggatcgagataaacaagcacttcgggaggagtttgaaaggaggagaaaagctagacaa
gtgaatgtctcaaccgatgattcagaggtcaaaactagtctaaggcagctcggtgaacct
atctgtttattcggagaaggccctgccgaacgtaggaatcgtcttagggatcttctctcc
aggcttggagaggatgcaataaaaaagaaacaagaggcagaagaagaaagaatccagcaa
gaaaaggatcaagagaccacatggtatcatgaaggtcctgaagctctgaaatctgccaga
tcttggattgcagctttctctcttcagcgtgcaaaacagagactagaaaaagcaagggcg
actgtattgaacaacgagacagctaccacagcccgaaagcaagaactacataaacgattg
acatccctctcaatatactgcagtcaaattggcgatacaaggcccataacattctgtagc
tttagtcctaattctcaactactagccacatgctcttggagcgggcttatgaagctttgg
tcaattccagactgtgagcaacaacacacgtttaagggtcatgaaggttttgtgggttgt
gtgaaattccaccccaaagctacaattgcagatacgcaaaatacatgtgagctagcctcc
tgcggatatgatggctctgttaaactatggtccatggacagagaaactgcaattgccgat
ctaactggtcacgacgccagagtttcgcgggttgcttttcatccatctggtcgattttta
ggaacttgctgctttgatcattcttggcgattgtgggatcttgaatcaacgcaagaagtt
cttcatcaagaaggtcactgccaaccagtctacagtattgcctttcaaaatgatggttct
gttgctgccacaggaggtatggacgcctttggtcgcgtgtgggatcttagaacagggaga
tgtatcatgttcatggaaggccatctgaaatcaatttatggggttgacttttcacccaac
gggtacataatggcaactggcagtgaggacaacagctgtcgaatatgggatcttcgcaaa
gtagcatgtgtttacacgataccagcccatatgaatctagtgtctcatgttaaattccaa
gaagatgaaggccattttcttgtcactgcctcttatgacaacaccgcaaagatttggtcc
aacaaaacatggcaaccaatgaagactctctctgggcactatggtaaagttatgggcatg
gatgtttccccagattcaaagtttatcgcaacatgttcctacgatagaacatacaaacta
tgggctcccgagtag
DBGET
integrated database retrieval system
