Bemisia tabaci (sweet potato whitefly): 109031081
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Entry
109031081 CDS
T06019
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
btab
Bemisia tabaci (sweet potato whitefly)
Pathway
btab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
btab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109031081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btab03019
]
109031081
Messenger RNA biogenesis [BR:
btab03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
109031081
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
109031081
NCBI-ProteinID:
XP_018897939
LinkDB
All DBs
Position
Unknown
AA seq
477 aa
AA seq
DB search
MADDGEESWLYGENGAAIEQLNAEHSQYFADKNDDGPPGIERGSERESMDDIPAPPGVSD
EKDNQAEEDGQLNASVTESEPPLPETNGDVEEKEEGERDDDSKEDDDDDDDDDDDDDNIN
IVIGDIRTAPSSYSALNIKRGGLVSSVRGADKTKPAGKFSVEDFEQIGTINSVPVHEYNL
DTLEEKPWRKPGADITDYFNYGFDEDTWRAYCERQKRYRLQESGVGLATLSSNATSTGTT
NILVPTNNFVPQQKTTIDTAVPPPPRPHVHTEQKYNAPASVIPVMTADRREYSRKHLGDM
SAPPPSIPPPVVPPPQYGVPPPPAGYPPPPPPREYSGNYFQPPEVDSYYLHNSYEPTQDS
QWNQAGWVPPVSVKNIPPPGTTPVDIKSEENLPPGTVQVKKEPADGASSSSREREKDRYR
ERSQRHRSRSRSHERRSRKRKSKSRSPSHRSHKKKKSKKSERSRDRSRDRSREKDSS
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatggagaggaatcgtggctgtacggagagaatggcgccgctatcgagcaa
ctcaacgcagaacacagtcagtactttgccgataaaaacgatgacgggccacctggtatt
gagcgaggatcagaacgggaaagcatggatgatattcctgctccccctggtgtgagtgat
gagaaggataatcaagcagaagaggatggtcaattgaatgcatctgttacagaatctgaa
cctccacttccggagacgaacggtgatgttgaggagaaagaagaaggagaacgtgatgat
gacagcaaggaagatgatgatgacgatgatgatgatgacgacgatgatgataatatcaat
attgttattggagacatccgaacagcaccatcctcctactctgcgctcaatatcaaaaga
ggagggcttgtctcttcagtcagaggtgctgataaaacaaagcccgcagggaaattttct
gttgaggattttgaacaaataggaactatcaactcggtgcctgtacatgagtacaattta
gatactctggaagaaaaaccctggcgtaaacctggagcagatatcacagattatttcaac
tatggttttgatgaagacacatggcgagcctattgtgaaaggcagaaacggtaccgtttg
caggaatcaggagttggacttgcaactctgagcagcaatgcaacctccacaggaacaacg
aatattttagttccaacaaataactttgttccccagcagaaaactacaatcgatacggcc
gttcccccaccacctcgcccgcacgtccacaccgaacagaagtataatgctcctgcatca
gttatacctgttatgacagctgataggagagaatacagcagaaaacacctcggcgatatg
tcggcccctccgcctagcatccctcctccagttgtgcctcccccacagtatggagtccca
cccccaccagctgggtatcctcctccgccaccaccgagggaatattcaggcaactacttc
cagcctcctgaggtagattcttattacctccacaactcgtatgagccaactcaagactct
cagtggaaccaggctggatgggttccccctgtcagtgtcaagaatattcctccgccaggc
acgacaccagtggatatcaagtctgaagaaaacttgccgccaggaactgtccaagtgaaa
aaagagccagctgacggtgcatcatcgtccagcagagaacgcgaaaaggaccgataccgg
gaaaggtctcaaaggcatcggtcgaggagtagaagtcatgaacgcaggtcaaggaaacgg
aagtcaaaaagtcgttctccctcacacaggagccacaagaaaaagaagtccaaaaagtct
gagcgatcaagggataggtccagagacaggtcaagggaaaaggatagttcttaa
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