Bemisia tabaci (sweet potato whitefly): 109031114
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Entry
109031114 CDS
T06019
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
btab
Bemisia tabaci (sweet potato whitefly)
Brite
KEGG Orthology (KO) [BR:
btab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btab03019
]
109031114
Messenger RNA biogenesis [BR:
btab03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
109031114
3'-5' decay
Other 3'-5' decay factors
109031114
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
ResIII
PAM2
zf-CCCH
AAA_19
AAA_22
AAA_18
AAA_24
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
109031114
NCBI-ProteinID:
XP_018898002
LinkDB
All DBs
Position
Unknown
AA seq
2037 aa
AA seq
DB search
MNEIEFQAHELVRRKEWSQALYLFDELLGHAVSKGLSKEKVVSFLLGRSECCLELGRHEA
VVLDCRRVIKLLQGAENNNSNLGARARRRLVHALFSLRRFGEAEAAATEWIASSDNSAQT
NTEALKMLERVRLVLQMANGQKNTYNRSYANPHQRVEDDILALDYKLESWIGTGVTGSVR
NQKHPVELIGDPAKTEPFIHHEQHGPEFSYASNHLDLLDMSFVENGQQSLIPLNQVVSMP
LANGYLEPEKKVNKPSDKLVYSCTYCCLNFSDRSELQAHCGSESHQTVIMSDEGRDWKWR
PPPRGYTGDNYSLCEAFMDGGENACRYGAQCVEAHGVEELAEWKHRFEYRRMRLERAAEK
ELYGKSYTEQLLEKWLSTTSPEKVLKEHIEEVEDSCVEELETTVASKTSSYEWNFILKSK
KSLRAVALLQDAHRNHFSLRRISTSDPSHKTKFDCEPNNNQEWLSPIPISNSEGFHEEQA
TLEYSVKVSFSTDIYGTFRQSVVFDFGSDPVLVKHVCVDVVPIDDVDKLKEIKKELTLSS
SERWEKENSEVIPFSSTIVPSASEDDTSREQELMALYPTPHSNSFQLTQSTISEKKLTRN
NYRPRMHELLYVEEMARYEQIAHYNLSTRLKLVNCYLLSPSGVSASTAKYAHNDELFALM
KLGKDVSEDTSAGRLILNNCATVLLAPSKKAVKKSSKENDESKEKRIVYEALIEDKGKNT
IYLRLSANTVKTLKLKRDTEVLFDVQFQLNRIPYCEWHQAVDKITDFKLIFPDTYTEPSI
PWTPTKQWSDTIDSKLNPKQKEAIVAITTPIEVSLPPILIIGPFGTGKTYTLAQAIKEVL
LQSDTRILVCTHSNSAADLYIKDYLHPYVQAGHTEARPLRVYYHKRWMATVNQVVQEYCL
SEVVNGVRKFKFPTVEDILKHRVVVVTLNISMFLSTLGLKKGFFTHILLDEAAQAMECEA
IMPLALANDKTRIVLAGDHMQLSAEIYSQFAKERLLHISLLERLYDHYPTTFPCKILLCE
NYRAHEAIIQFTSELFYDQKLISSGKQPRHDTYYPLTFFTTRGEDVQDNNSTAFYNNAEV
YELVERVSELKKKWPSSWGKQDEHSIGIMTPYADQVFRIRSELRKRRLGGISVERVLNVQ
GKQFRAVFLSTVRTRRTCDSNQGSEDVEYGFLSNSKLLNTAITRAQSLVAVVGDPVALCS
IGRCRKVWERFLEICNLNKSLLGITWSLLRSQLDGVELKKTYVLNPLAPEFVPRILPVEP
YIRIPNNLVGNFNKMWNPFGVQVPPPPPAIMQSVHPLYPLPLFYPCPQQPNGFYAIRPPP
VLPSSSNPLVSPWTMHVPPPPPPPPLPPASILSPSNGVYPAASNWIKKKDLSPTLNDNSI
RPPPGLLHPAASQNPVYQPVPRQSSANLEPSVPLSNSLTVPPATLIRPRNIVASNNLLQT
VPNQHPMQIQQLKAVRNDFLASPQQLDRIEDLQFIQNMNFPEKHEPTEKISLLPPNVSLN
ELLDSPQQQVEWYNHLCDVAGIEIANKYVELITAEMKKHRHLAVTTNQENRIQQRPQSTE
IFSSQSVIDPMLARPQTWYAGEKTVMQDMKPPPTQNILETEFFNQPILKPPTALSEGVDQ
FEKLSISSDRTSIPLYQRQSQQQQHQQQQQQQQQQQQQQHQQQQQQQQQQHQLQQQQQHQ
LQQRQQIQQQQLQQQHQLLLQQQQQVRVIVPDGLDRSNLLIKTGTVLNGFSSPLSSNASF
SPANSSSFNLVPNNASLIGLSNISNPNFSAPINNNSVYNLDAKPPLNLPMSSGNTTPYNL
TATSSFNLPSGSVQALSISTSNHVGAHHLPMSDGINTSSFNIPVNISINSSAYNMHTLNN
SVYSMQSSSSSSYSNLPATNNVSTYCVVSNSSTNPTAFSAPTKSGPSIGGSNDYMFMNGF
SNYSSNQMYVSSNNDVNSSAENSNSVSVNGFSSAKPNAPSQNASNVNQWSNQDLSDDAQK
QTTYASVLRQQQHQQQQKTTSNQDSVNKSPTKVVGPFAVLRDLGQKNTHSGLYHYFS
NT seq
6114 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaatcgagttccaggcgcacgaactcgtgcgtcgtaaggaatggagtcaagct
ctttacttgtttgatgaacttctgggacatgcagtttctaaagggctgtccaaagaaaaa
gttgtttccttcttgcttggtcgatcagaatgttgtttagaacttggacgacatgaagct
gttgttctggactgccgtcgagtcatcaaactgttgcaaggtgctgaaaataacaatagc
aatcttggtgcaagagcccgaagacgtcttgttcatgcccttttctcactcagaaggttt
ggtgaagctgaagctgctgccaccgaatggatagcatcaagcgataactctgctcagact
aatactgaagccttaaaaatgctggagcgagtaagactggtattacagatggccaatggt
caaaagaatacttataataggagctatgcaaatcctcatcaacgagtggaggatgatatc
cttgccctagattataaactagaatcatggataggaacaggagtaacaggatctgttagg
aatcagaaacatccagttgaactaattggtgatccagctaaaacagaacccttcatccac
catgaacaacatggtccagaattctcgtatgcgagtaaccatctagatttgttagacatg
tcattcgtggagaatggtcagcagtctctcattcctttgaaccaagtggtcagtatgcct
ctagccaatggatacttggagccagaaaagaaagtgaacaaacccagtgataaactcgtt
tattcctgtacttactgttgtttaaatttcagtgatagatcagaacttcaagctcactgt
ggttcagaaagccatcaaactgttataatgtctgatgaaggaagggactggaagtggaga
cccccgcctcgaggctacactggtgacaattatagtctctgtgaagcttttatggatggt
ggtgaaaacgcctgccgatatggtgctcagtgtgtagaagcgcatggtgttgaagagtta
gcggaatggaagcatcgctttgagtatagaagaatgcgcctagagcgagctgctgaaaaa
gaactctatggaaagtcctatacagagcaactattagaaaaatggctttccactacgagc
ccagaaaaagtactgaaggagcatattgaagaagtagaggatagttgtgtcgaagaacta
gaaacaacggttgcatccaaaactagtagttatgaatggaacttcattctgaagtcgaag
aaatctttaagagctgtggctcttcttcaagatgcacatagaaatcatttttccctaagg
cggatttcaacttctgacccttctcataaaactaagtttgactgtgaaccaaacaacaat
caagaatggctctccccaatcccaatatccaacagtgaaggatttcatgaagagcaagca
acgttagaatactccgtcaaagtttcgttttccactgatatctacggaacctttaggcag
tctgtagttttcgattttggatctgatcctgttctagtgaagcatgtatgtgttgacgtt
gtccctattgatgatgttgataaattaaaagaaattaagaaggaattgactttatcatcg
tctgaaaggtgggaaaaagagaattcggaggtgattccattcagttctaccattgtacca
tcagcatcagaggatgataccagtcgggaacaggaattaatggctttgtatccgacgcct
catagtaattcattccagctcacccagtcaacaatttcagaaaagaaacttacgaggaat
aactacagaccaaggatgcatgaactcctttacgttgaagaaatggccagatacgaacag
attgcccattataatctatctacgagactcaagctagtgaattgctatcttttatctcct
agtggagtttcagctagcacagcgaagtatgcccataatgatgaactatttgctttaatg
aaacttgggaaagatgtttctgaagatacatccgccggtagactaatcttaaacaattgt
gcaactgtattattagctcctagtaaaaaagctgtcaagaaatcttccaaagaaaatgat
gaaagcaaagaaaaacgtatagtttacgaagctctaattgaagataaagggaaaaataca
atttatcttaggttatctgctaacactgtcaaaacattaaagttgaagagggacacagaa
gtattattcgatgttcaatttcaactcaataggattccgtactgtgaatggcatcaggct
gtggataaaatcaccgattttaaactaatatttccagatacttacactgagccaagtatc
ccttggacaccaacgaaacagtggagtgatacaattgattcaaagctaaaccctaagcag
aaagaagctattgttgcgattaccactccaatagaagtatccttaccaccgattctaatc
ataggtccatttggaactggaaagacgtatacattagcgcaggcaattaaagaagttctt
ctccagtcagatacaaggatattagtgtgtactcattcaaatagcgcagctgatctttac
attaaggattatttacatccgtacgtccaagccggtcatacagaagctagacctctcaga
gtttactaccataaaagatggatggcaaccgtgaatcaagtcgttcaagagtactgtttg
tcagaagttgtgaatggtgtgcggaagttcaagtttccgactgtggaagatattttaaag
catcgtgttgtagttgtaactttgaatatctcaatgtttttatcaacattaggcttgaaa
aaaggttttttcactcacattttgcttgatgaagcagcgcaagcaatggagtgtgaggcg
atcatgccactagcgttagcaaatgataaaactaggatagtgttagctggtgaccatatg
caattgagtgctgaaatatattcccagtttgcaaaagaacgacttctgcatatttcactg
ctagaaagactgtacgatcactatccaactacatttccttgtaaaattttactctgtgaa
aattatagggctcatgaggcaattattcagtttacatcagagttgttttatgaccagaaa
ctaattagcagtgggaaacaaccaaggcatgatacttattatccgctgactttctttaca
accagaggagaagacgttcaagataataattcaacagctttttacaataacgctgaagtt
tacgaactagttgaaagggtgagcgagcttaagaaaaaatggccttcatcttggggtaag
caagatgaacattcaatcggcattatgacaccctatgcagatcaagtattcagaattcgg
tcggaactgaggaaacgacgtttgggaggaatatctgtggaacgagtcctgaatgttcaa
ggtaaacaatttcgagcggtatttttaagtacggttagaacacggcggacttgtgactcc
aatcaaggcagtgaagatgtcgaatatggatttctatcaaattcgaagctcctcaacaca
gccatcacacgggctcaaagtctagttgctgttgttggtgatcctgtagccctttgctcc
attggtcgttgcaggaaagtctgggagcgattcttagaaatttgtaatttgaacaagagt
ttactcggaatcacatggtcactacttcgaagtcagcttgatggagtagaactgaaaaag
acttatgtgttgaatcccttggcaccggaatttgtgccaagaatcctgcctgtagagccg
tatattcgaattccaaacaatttagtcggaaatttcaataaaatgtggaaccccttcggg
gttcaagttcccccgccgccccctgcgatcatgcagagtgttcaccctctttatcctcta
ccattattctacccttgtcctcaacaacccaacggcttttacgctattagaccgccacct
gtattaccctcctcttcaaatccattggtaagtccttggacgatgcatgttccacctcct
cctcctcctccgcctttaccccctgcatctattttgtctccttctaatggtgtttatcca
gcagcatctaactggattaaaaagaaggacctttcacctacccttaacgataatagtatt
agacctccccctggactacttcatcctgctgcatctcagaatcctgtttatcagccagtt
cccagacagtcatcagccaacttagagccctcagttcctctttctaatagtttgactgta
ccgccggcaactttaattagaccacgaaatatagtagcatcaaataacttgcttcagaca
gttccaaatcagcatccaatgcagattcaacaactcaaagcggttagaaacgatttcctt
gcgtcacctcaacagttagacagaattgaggatcttcaattcattcagaatatgaatttc
ccggaaaaacatgaaccaacagaaaaaatctctcttttacccccaaatgttagcttgaat
gaattattagactctccacaacaacaagtagaatggtataatcatctttgtgatgtggca
ggcattgaaatagctaataagtacgtagaattaataacagcggaaatgaaaaaacatagg
catttagctgtcaccactaatcaagaaaataggattcaacaacgacctcagtccaccgag
atattctcctcgcaatccgtaatagatccaatgttggctcgaccccagacctggtatgct
ggcgaaaaaactgttatgcaagatatgaaaccgcctccaactcagaatattctggagaca
gaatttttcaatcaacctattctgaaaccaccaactgctctgtcggagggagtggatcag
ttcgaaaagttaagtatatcctcggacaggacatctatacctttgtaccaaagacagtct
caacagcaacaacatcaacagcagcagcaacaacaacaacaacagcagcaacaacaacat
cagcagcagcaacaacaacaacagcagcagcatcagttacagcagcagcagcaacatcag
ttacagcaacggcagcaaattcagcaacagcagttacagcaacaacaccagcttctgctt
cagcagcagcagcaagttagagtaatagtgcccgatggtctggataggtcaaatcttcta
atcaagaccggaactgttcttaatggttttagctctccgctaagttcaaacgcatcattt
agtcctgcaaactcatcctcctttaatctagttccaaataatgcatcgttgataggtttg
agcaacattagcaaccctaatttctcagcaccgattaacaacaactctgtttataatcta
gacgctaaacctcctctgaatctccctatgtcaagtggcaacacaacaccctataatctc
actgcaacatcctcttttaacttacctagtggctctgttcaagcactcagcatttctaca
agtaatcatgttggtgcacatcacctacctatgagcgatggtataaatacatcctctttc
aatatccctgtaaatattagcattaactcgtcagcatataacatgcatacactgaataac
tccgtttatagtatgcagtcttctagtagttcatcatatagtaatctaccagcaacaaat
aacgtttctacttattgtgttgtatcaaatagtagcacaaaccccacagcttttagtgct
ccgacaaaaagcgggcccagtataggagggtcgaatgattatatgttcatgaatgggttt
tcaaactattctagtaatcaaatgtatgtatcatcaaataacgatgtaaatagtagcgcg
gaaaactcaaattctgttagtgtgaatggattttcaagtgcaaaaccaaacgcaccttca
cagaatgcatcaaatgttaaccagtggagtaatcaagatctaagtgatgatgctcaaaag
caaaccacttacgcgagtgttttaagacagcagcaacaccagcaacagcagaaaaccact
agcaaccaagattctgtaaataagtcaccaactaaagttgttggtccttttgcagtttta
agagatctaggacaaaagaatacccacagtgggttatatcattatttctcataa
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integrated database retrieval system
