Bemisia tabaci (sweet potato whitefly): 109031413
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Entry
109031413 CDS
T06019
Name
(RefSeq) putative ATP-dependent RNA helicase me31b
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
btab
Bemisia tabaci (sweet potato whitefly)
Pathway
btab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109031413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btab03019
]
109031413
03036 Chromosome and associated proteins [BR:
btab03036
]
109031413
Enzymes [BR:
btab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109031413
Messenger RNA biogenesis [BR:
btab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
109031413
mRNA degradation factors
5'-3' decay
Decapping complex
109031413
Chromosome and associated proteins [BR:
btab03036
]
Eukaryotic type
Gene silencing
piRNA pathway
109031413
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA
CMS1
Motif
Other DBs
NCBI-GeneID:
109031413
NCBI-ProteinID:
XP_018898446
UniProt:
A0A9P0AFK0
LinkDB
All DBs
Position
Unknown
AA seq
441 aa
AA seq
DB search
MIMMENHIGSNHALSAKNSSTKFDADKDESWKSKLKIPPPDRRIKTSDVTDTRGIEFSEF
CLKRELLMGIFEKGWEKPSPIQEATIPIALTGKDILARAKNGTGKTGAYCIPVLEQINPK
LDHIQALIMVPTRELALQTSQICMELSKHMDIKVMVTTGGTNLKDDIMRIYDKVHVIIAT
PGRILDLMDKHVANMEHCKILVLDEADKLLSQDFQGMLDHVISKLPQERQIFLFSATFPL
TVKNFMDKHLRNPYEVNLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIFCN
STQRVELLAKKITDLGYCCYYIHAKMAQAHRNRVFHDFRKGVCRNLVCSDLFTRGIDVQA
VNVVINFDFPKMAETYLHRIGRSGRFGHLGIAINLITYEDRFNLHRIEQELGTEIKPIPK
QIDPSLYVARTPENDEQDVSK
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgataatgatggagaatcatatcggttccaaccatgcgctttccgccaaaaactcaagc
accaaatttgacgctgataaggatgaaagctggaaatccaaactgaaaattcctccacct
gataggcgaatcaagactagtgatgtcactgataccagaggaattgaatttagtgaattt
tgcttgaagcgtgagctattgatgggaatcttcgaaaaaggctgggaaaaaccaagtcca
atccaagaagcgactatacccattgcactgactggcaaagatatccttgctagagcaaag
aatggaactggaaaaactggtgcatactgtatacctgttctggaacaaattaatcccaag
ttggatcatattcaagcactaattatggtaccaacccgagagttggctctgcaaacgagt
cagatttgcatggaactatcgaagcacatggatatcaaagtaatggttactactggtggt
actaatctcaaagatgacatcatgcggatatatgataaggttcatgtgataattgcaacc
cctggacgtattttagatttgatggataaacatgtagccaatatggaacactgcaaaatt
ttagtgcttgatgaagctgacaaattgctgtctcaagatttccaaggaatgctagaccat
gtgatctcaaaacttccccaagaaagacaaattttcctattctctgctacctttcctctt
acggttaaaaattttatggacaagcatcttaggaacccgtacgaagtcaaccttatggaa
gaactaacactgaaaggtgtaacgcaatactatgcgttcgttcaagaaaggcaaaaagtc
cattgcttaaatacactgttctctaaactgcagatcaatcaaagcataattttctgcaac
tcaacgcaacgagtagaattgctagccaagaaaatcactgacctcggctactgctgctac
tacattcatgccaaaatggctcaagcccataggaatagagtgttccacgatttccgcaaa
ggagtttgccgaaaccttgtatgctcagatctattcaccagaggtattgatgtgcaagcc
gtaaatgtcgtcatcaactttgatttccccaagatggctgaaacctacttgcatcgtatc
ggcagatcaggccgttttggtcaccttggtattgctatcaatctaatcacttacgaagac
aggttcaacctgcaccggatcgaacaagagctcggaactgaaattaagcctattcccaag
caaatcgatccgtcactttacgttgccagaacaccggaaaacgacgaacaagatgtcagt
aaataa
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