Bemisia tabaci (sweet potato whitefly): 109032204
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Entry
109032204 CDS
T06019
Name
(RefSeq) probable ATP-dependent RNA helicase pitchoune
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
btab
Bemisia tabaci (sweet potato whitefly)
Brite
KEGG Orthology (KO) [BR:
btab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
btab03041
]
109032204
03009 Ribosome biogenesis [BR:
btab03009
]
109032204
Enzymes [BR:
btab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109032204
Spliceosome [BR:
btab03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
109032204
Ribosome biogenesis [BR:
btab03009
]
Eukaryotic type
90S particles
Helicases
109032204
Pre-60S particles
109032204
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
SecA_DEAD
AAA_30
AAA_22
Motif
Other DBs
NCBI-GeneID:
109032204
NCBI-ProteinID:
XP_018899762
UniProt:
A0A9P0C6H2
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
MVPRVRVSHEFHPHGPVTVLLFSCKRTILIMKDKNFKKIKRKNPPTEKMPVAENEEALPG
TRIGMSILHNNGFDVLKGSVSEETLKGIADMGFTKMTEIQAKALPPLLEGRDIIGTAKTG
SGKTLAFLIPAIELMNKLKFMPRNGTGVIIISPTRELSMQTFGVLKELMKYHNHTYGLVM
GGANRQTEAQKLAKGVNILVATPGRLLDHLQNTPTFLYKNLHCLIIDEADRILDIGFEED
LKMIINLLPKRRQTMLFSATTTEKTEMLSKLALKKEPVQVGVEDNDDKATVEGLEQGYVV
CPSEKRFLLLFTFLKRNRKKKVMVFFSSCMSVKFHHELLNYIDLPVMSIHGKQKQEKRTT
TFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGGKGNA
LLILRPEELGFLYYLKKAKIPLNEFEFSWNKIADIQLELEKLIAKNYFLHISAKEAYKSY
VRAYDSHHLKNIFDIDTLDVEKVAKSFGFLVPPAVDLQVNSSKGKRPRKRHGGGGYGHFN
KMNEEEKEEVGFIHIKKKKKMKKPKETEKIDTYTYLKDKNLAALI
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggttcctcgagttcgagtttcacatgagtttcacccacatggcccagtgactgtttta
ctcttttcttgtaaaaggacaatcctcatcatgaaagacaagaattttaaaaagattaag
agaaagaaccctcctactgaaaaaatgccagtggcagaaaatgaagaggctttacctggc
accagaattggaatgagtattctacacaacaatggatttgatgttctcaaaggcagtgtc
tcagaggaaacactaaaaggcattgctgatatgggcttcacaaaaatgacggaaattcag
gcaaaagccctccctccattacttgagggtcgagacatcataggaacagccaaaactggc
tctgggaagactctcgcgttcctgatcccagccattgaactcatgaataagttgaagttc
atgccaaggaatggaacgggcgttatcattatctctccaacaagagagctttctatgcag
acatttggtgtgttgaaagaacttatgaagtaccacaatcatacatatggattggtcatg
ggaggagcaaataggcaaactgaagcccaaaaactggctaaaggtgtcaatatacttgtg
gcaactcctggtagattacttgatcatttacaaaataccccaacatttttatacaaaaac
ctccattgtctcatcattgatgaagcagacagaattctagacattggattcgaagaagat
cttaaaatgataattaacctacttccaaaaaggagacaaactatgttatttagtgcaaca
acgacagaaaaaacagaaatgctaagcaaactagcactgaagaaagagcctgttcaagtt
ggtgttgaagataatgatgacaaggcaacagttgaaggacttgagcaaggttatgttgtt
tgcccttcagaaaaacgattcttgcttttgtttacatttttaaaaaggaatcggaaaaag
aaagttatggtgtttttcagttcgtgtatgtctgttaaatttcaccatgaattactaaat
tatattgatcttcctgtcatgagtatccatggaaaacaaaaacaggagaaacgaacaaca
accttcttccaattttgtaatgcagagacaggaatcctactgtgtacagatgttgctgcc
agaggtcttgatatccctgctgttgattggattgtacagtatgatccacctgatgatcca
aaggaatatattcacagagttggaagaacagccagaggagaaggaggcaagggtaatgcc
ttgcttattttgcgacccgaagaactagggtttttgtattatcttaaaaaagcaaaaatt
ccgctcaatgaatttgagttttcctggaataaaatagcggatattcaactggagttagaa
aagttaatagcgaaaaattacttcttacacatttctgcaaaggaagcatacaagtcttat
gttcgagcatatgattctcatcatttgaaaaatatcttcgacattgacaccctagatgtg
gaaaaagtcgccaaatcttttggttttttggtaccaccagctgttgacctccaagtgaat
tcatcgaagggaaagcgtccgaggaagcggcacggaggaggtggatacggccatttcaac
aaaatgaatgaagaagagaaagaggaagtaggatttattcatataaagaagaaaaagaag
atgaagaagcctaaagaaacagaaaagatagacacctacacatacctgaaggataagaac
cttgctgcacttatctaa
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