Bemisia tabaci (sweet potato whitefly): 109032453
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Entry
109032453 CDS
T06019
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
btab
Bemisia tabaci (sweet potato whitefly)
Pathway
btab03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
btab00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109032453
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btab03019
]
109032453
03009 Ribosome biogenesis [BR:
btab03009
]
109032453
03036 Chromosome and associated proteins [BR:
btab03036
]
109032453
Enzymes [BR:
btab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
109032453
Messenger RNA biogenesis [BR:
btab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
109032453
Ribosome biogenesis [BR:
btab03009
]
Eukaryotic type
90S particles
RNase
109032453
Prokaryotic type
rRNA processing factors
109032453
Chromosome and associated proteins [BR:
btab03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
109032453
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
BESS
Motif
Other DBs
NCBI-GeneID:
109032453
NCBI-ProteinID:
XP_018900133
UniProt:
A0A9P0A5C4
LinkDB
All DBs
Position
Unknown
AA seq
2173 aa
AA seq
DB search
MSYMTSLSDDQAPDHYGGGTAGGIVTPDMHVLNQPDTFGMQNPIDMNAPQPLRNDNDISS
SDPLILNQETHFLPDYGTDFDSLPVYHDDLLPPGVGDLPAEYPNAPISENNGFYCNVNHP
IKAENKLDDDINAFLNKTSEKHENKLKRDIDNFVKMNSKAADRRMSEDIKAFLRRCRSPS
PIESAKSLFPKNKSYSKPNRSSSRAPSKARASSPFDSKPAARQSRSMVSRTRSVVSRRPS
TESRFEKKGPRAVRSKSPPDKKPPALLSRSKSPEDKKPLPLAYLTPEERKQLRGYSSSPE
GRKPSPTDYSKVGSKSPCDRRRSSFSPSKSPVDTTTKHREPFNPNIPRQDRLKPKILLRD
REAAEKRKDYEKKLETLAKLKPEEIIELEKKIWTKSELLPLYYSRQKSNKAVCEATPKLL
ALCDKFEEKLIKAPEKIRASKPPYTPPYARKKLRRPCCHHGKHNPSSSSDTSDEDEEEEE
TAENIMKKKHEHPQSLHKELWFNDPGQMNDGVLCRCSAKAARSGIRHGIYQGETNIPPCD
PNTNNLDRLYHYRITLSPPTNFLTKMPTVIEHDDHEYIFEGFSMFTHEPLGELPTCKVIR
FNINYAILYIEEDKPENFTIRELDLFQKYIFYELLELVDFSLKPSYAKGETCPLFHFMPR
FVRELPENGKEILGMGNVINYLLKSYQLIVPDEEVRRLNNLSTIDWQDEILRYKGMIITY
PGAKPSSIRVDQLNRDDQEDIHPEVVHFGIRPPQLSYAGNPEYQKAWRAYVKFRHLIANM
PKPSYEDKRKLEKKEQKLLEMRTQSKMKRGVTITVSSQNFYATGIMCDVVQHAMLLPVLV
CHLRFHRSLQILEDNINYKFKNRYLLQLAMTHPSFRENFGTNPDHARNSLTNCGIRQPEY
GDRRIHYMNTRKRGINTLINIMSRFGKKNETESNISHNERLEFLGDAVVEFITSIHLYHM
FPDLEEGGLATYRAALVQNQHLAVLAKVLNLQDFMLYAHGSDLCHELELRHAMANCFEAL
MGALFLDGGIEIPDKVFGHTFFKSDPQLLDVWVNYPKHPLQEQEPDTDRHWIASFPLLQK
LVQFEESIGVEFTHIRLLARAFTDRSVGYTNLTLGSNQRMEFLGDTVLQLIASDYLYRYF
PEHHEGHLSLLRSSLVNNRTQSVVCDDLNIPAYALYSNPKAELKTKDRADLLESFLGALY
IDKGIAYCRVFCDVCFFPRLQDFIMHQDWNDPKSKLQQCCLTLRTLDGGEPDIPIYKVIE
CKGPTNSRIYTVAVYFRRQRLAEASGHSIQQAEMNAANSALELSKGLFPQLDHQKRVIAK
SMIYNGRAPNQKFNQQQSTRFGQRAGIRGRLSNRGRGGFANNQPRIKRVNKQLGAKAALE
NKDPAGRGAMRGGKTFVGRSDARGRRPLRRLQDRDDSRQSTVKEEEDEFDSTIKSHIMKE
KLNRQILKEWEEELAAETEKKDKEKKEKEKQILLKRRQIAKEWEEELAETERKEKIRKKI
SKIKNLGSKAVQKEATKAERLKKKEEILKLKKKLKLRLKEKKRLKAKQKAQQKLRKILLS
AEKLKRRLQMREKIMEWQAYESEVKRKLAEENEKKQRGKAEVERMRMLLKGCAPSSAPDQ
LKTEEGEATEKFTERKSTDSSLKAEPITKEALLEAKLEVKSEVKLENPNLPRMQSKSNRL
ESRILEESKKSRSSGPMETNKKSEVSNRDQFRVKPERSSEPDRKENKEDDFLKSVLPTIE
EISNLKKMLEEFDTDKMTKKDIEKLKKKLKKQKLGRDVEKAENDKKSVPSKSRRRRTVSS
EGSSIERSPSPRHRRLEAEIESSKKRRSKKREKSVSKKQEKSVSKKREKSVSKVREKSIS
KVREKSVSKIREKPRRSVSPLRKMKLRSPSPVRRKRKSSHSEKSSSSKSKSKIHDDVGIR
HRKMRSRSRSREKGRKSVSLSPVRSQKRVRRSRSLSLSLSPPGKRYRTKSRSRSPKFFSH
HRSRSRSRSPGDKYRKSKSSRSDRDEYLKQMLNMSQSSTVCPGCIAGTCAMSSSHLVPGP
VAPPMHPPPMAYGPPGPPMICPGPPRPGPPCHGPHPGPPRPGPPMYGRFPPPGPMRGPPL
IRGPHPRFPPRGPLPPGVAPFQRPPRGPPRPGFRPGFRPRGPPPPGAYYPPPAPGQFPAQ
PDPNYSGPPNYWA
NT seq
6522 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacatgacatcccttagtgatgatcaagctcccgaccattatggaggtggcaca
gccggagggatcgtcacccctgatatgcatgtattgaatcagcctgatacattcggaatg
cagaaccctattgatatgaatgctcctcagcctctcaggaatgataatgatatttctagt
tcagatccattaattctgaatcaggagactcatttccttcctgactatggaactgatttc
gactctctacctgtctatcatgatgatcttctaccacctggtgttggagatcttccagcc
gaatacccaaatgcaccgattagtgagaacaatgggttttactgcaatgtaaaccatcct
atcaaagctgagaataaattagacgacgacatcaatgctttcttgaataaaacttccgaa
aaacatgaaaacaagctaaagcgagacatagacaactttgtgaagatgaattcaaaggct
gcagaccgacgcatgagtgaagatatcaaagcatttctgagaagatgtagaagtccttcg
cccattgaaagtgcgaaaagtttgtttccgaaaaataaaagttactcaaaaccaaaccgg
agttcaagtcgagcaccctcgaaagcccgagcttcatcgccatttgacagtaaaccagca
gctcgccaatctcgatcaatggtcagtagaactcggtctgtagttagtcgtcggccctct
acagagtcaaggttcgaaaagaaaggccctcgtgcggtaaggtctaaaagtccacctgat
aagaaaccgcctgcattgttgtcaagatctaaaagtccagaagataagaagcctttgcct
ttggcatatcttactcctgaagaaaggaagcagcttcgtggttattctagcagtccagag
ggaagaaaaccgtcacccactgattactcaaaggttggatcaaagagcccttgtgataga
agaagatcatcattctctccatcgaaaagtccagttgatactaccacaaaacacagagaa
cccttcaatcccaatatacccagacaagatagactgaaaccgaagattttgctgagagac
cgtgaagcagcagaaaagcgcaaagactatgaaaagaaactagagaccctggcaaagttg
aaacctgaagaaatcattgaattagaaaagaaaatatggaccaaatcagaactcttacct
ctttactattcgcgacaaaaatcgaacaaagctgtctgtgaagccaccccaaagcttctt
gccttatgtgataaatttgaagaaaaactgatcaaagcgccggaaaaaataagagcatcg
aaacctccgtacaccccaccttatgctagaaaaaagttgaggagaccctgttgtcatcat
ggtaaacacaaccctagtagttcgagtgatacgagtgatgaggatgaagaagaagaggag
acagcagagaatatcatgaagaagaagcatgagcaccctcaaagtctccacaaagaactc
tggtttaacgatcctggccagatgaacgacggagttctgtgtcgttgcagtgccaaagct
gcaagatctggaattaggcacggaatttatcaaggtgaaacaaacatcccaccttgcgac
cccaacacaaataatttggatcgactgtaccattatagaatcacactctcacctccaaca
aatttcttgaccaaaatgcctactgtcattgaacatgatgaccatgaatacatatttgaa
gggttttctatgttcacgcatgagcctttgggagaactaccaacatgcaaagttatacgc
tttaatattaactatgccatactttatattgaggaagataagcctgaaaatttcaccatt
agggaattagacctatttcaaaagtacattttttatgaattgttggagcttgtggacttt
tctttgaaaccctcctatgccaagggcgagacatgtcctttgtttcatttcatgcccaga
tttgttcgtgagcttcctgaaaatggtaaagagattttaggaatgggcaatgtcatcaat
tatcttttgaaaagttaccagttaatagtgcctgatgaggaggtaagaaggctgaataat
ctgtccaccattgattggcaggatgaaatattgcgctacaaaggcatgatcatcacatac
cctggtgcgaaaccatcatctattcgtgttgaccagctcaacagagatgaccaggaggat
atccatcctgaggtcgtccattttgggattcggccaccacaacttagctacgctggaaat
ccagagtatcagaaagcatggagagcttacgttaagttcaggcatttgattgcaaacatg
ccaaaaccatcgtatgaggacaagaggaagttagaaaaaaaggagcaaaagctcttggaa
atgcgaacgcaaagtaaaatgaagcggggagtaacgattactgtcagcagtcagaatttt
tacgctacgggtataatgtgtgatgttgtccagcatgccatgctgctgccagttctagtg
tgtcaccttcgttttcaccgttcattacaaattttggaagacaacattaactataaattc
aagaatcgttatctcttgcaacttgccatgactcacccttcctttagagaaaactttggc
accaacccagatcatgctagaaattcactgacaaactgtggtattcgacagccagaatat
ggagatcggcggatacattatatgaatactaggaaaagaggtatcaacactttgatcaat
attatgtcacggttcgggaagaaaaatgaaaccgaatcaaacatttcacacaatgaaagg
ctggagtttcttggtgacgcagtggttgaatttattaccagcattcatctgtatcacatg
tttccggatcttgaagagggtggcttagcaacgtacagagcggctctagttcagaatcag
catcttgctgttctggccaaggtgttaaacttacaagacttcatgttgtatgctcatggc
tcggatctttgtcatgaattggagcttcgtcatgctatggcaaattgttttgaagctctg
atgggggcgttgttcttggatggtggaattgaaattcctgacaaagtattcggtcatact
tttttcaaatctgatcctcaactattggatgtgtgggtcaattatccgaaacatcctctc
caagaacaagaaccagacactgatagacattggatcgcttcttttccattgctccagaaa
ctggtgcagttcgaagagtccattggtgtagagttcacacatatccgtttactggctaga
gctttcaccgatcgaagcgttggttacaccaacttaactctaggatccaatcagaggatg
gaatttttgggtgataccgttttgcagcttattgcctcagactacctgtacagatacttc
ccagagcatcatgaaggtcatctttctttgctgcggagctctctagtcaataatcgcacc
cagtcagtggtctgtgatgacttgaacattcctgcctatgcactctattcaaatccaaaa
gctgaattgaaaaccaaggacagagccgatcttttagaatcattcttaggagctttgtat
attgataagggaatagcttactgcagggtcttctgcgatgtctgcttcttccctcgtctg
caggactttatcatgcatcaagactggaatgatcccaaatcaaagttgcaacaatgctgt
ctaacattgcgcactcttgatggtggtgaaccggacataccaatctacaaggtgattgag
tgcaagggtcccacaaactcgcgaatctacactgtcgcagtctattttcgaaggcaaaga
ttggcagaggcgtctggtcatagtattcaacaagcggagatgaatgctgctaacagtgcc
ttggaactttctaaaggtctattcccgcagttggaccatcaaaagcgcgttatagctaaa
agtatgatctacaatgggcgagcgccgaatcagaagttcaaccagcagcagagtacaagg
ttcggacaacgagctggcatacgaggaagactcagcaacagaggcaggggcggttttgcg
aacaatcaaccacgaataaaacgagtcaacaaacagcttggcgcaaaagctgcgcttgaa
aataaagacccagcaggacgtggagccatgcgaggtgggaagacctttgttggaagatct
gatgcaagaggaagaagaccactcaggagactccaagacagggatgattctcgccaatcc
accgtgaaagaagaggaggatgagtttgattctacgataaaatctcatattatgaaggaa
aaattgaacaggcagatcttaaaagaatgggaagaagaattggcagcagagactgagaag
aaggacaaagaaaagaaagagaaggaaaaacagattcttctaaagaggagacagattgca
aaagagtgggaagaagagttagctgaaacagaacgaaaagaaaaaattcgcaaaaaaata
tcgaaaattaagaatctcggctccaaagctgtgcagaaggaagccacaaaagctgaaaga
ctgaaaaagaaagaagaaatcctgaaactgaagaaaaaattgaagcttcgattaaaagag
aaaaagcgcttaaaagcaaaacagaaggcacagcaaaagttaaggaagattctgttgtct
gctgagaagctgaaaagaagacttcaaatgagagaaaaaatcatggagtggcaagcttac
gaaagcgaagtgaagcggaagcttgcagaggaaaatgaaaaaaaacagagaggaaaggcg
gaagttgaacgaatgcgaatgcttctcaaaggatgtgcgccctcatctgcgcctgatcaa
cttaaaactgaggagggagaagccactgagaaatttacagaaagaaaaagtactgacagt
tctttaaaagctgagcctataacaaaagaagccttgttagaggcaaagttagaagtaaaa
tctgaagtgaaacttgaaaatcctaacttaccccgtatgcagagtaaatcaaatcgatta
gaatctagaatcctcgaagaatccaaaaaatcaaggagttcagggcccatggagactaat
aagaaatcagaggtttccaatagagaccaatttcgggtaaagcctgagaggtcctcagaa
ccagatcgtaaagaaaacaaagaggatgacttcttaaaatctgttttgcccaccattgaa
gaaatttcaaatctaaagaagatgttagaagagttcgatacagataaaatgacgaaaaaa
gatatcgaaaaacttaaaaagaaactgaaaaaacaaaaattaggcagagatgttgaaaaa
gcagaaaacgataaaaagtctgtcccttcaaaatcacggaggcgtagaactgtttcgtca
gaaggatcctccatagagcgatcaccatctcctcgccataggaggttagaggcagaaata
gagtcgtctaaaaaacgcaggtcaaaaaagagggaaaagtctgtatccaagaagcaggaa
aaatctgtctctaagaagcgggaaaaatctgtatccaaggtgcgagaaaaatctatatcc
aaggtgcgagaaaaatctgtatccaagattcgagagaaacctaggagatcagtctcacct
ctgcgcaaaatgaaacttaggtcaccatctccagtcagacgaaaacgcaaatcaagtcac
tctgagaagtctagttccagtaaatctaagtctaaaattcatgatgatgtgggaatacga
catcgtaaaatgcgtagcagatctcggtcgcgggagaaaggtcggaaaagtgtgtcactt
tcccctgtacgatctcagaagcgcgttcgcagaagtagatccttatctctgtccctctcc
cctccaggcaaacgatatcgaacaaaatcgaggtcaagatctcctaagtttttcagtcat
catagatcaagatcgagatctcgctccccaggtgacaagtataggaaatccaagagttct
cggtcagacagagatgagtatctgaagcagatgctgaacatgagtcaaagtagtacagtt
tgtccaggttgtattgcaggtacctgcgcaatgagctctagtcatttagtacctggtcca
gtggcaccacccatgcatccccctcctatggcatatggcccgcctggaccaccaatgatc
tgcccaggaccaccgcgccccggaccaccatgtcatggaccgcaccctggaccaccacgc
cccggaccaccaatgtatggccgtttccctccccctggtcccatgcgaggtcctccctta
attagagggccacaccccagatttcctccccgaggtccattgccgcctggagttgctccc
ttccaaagacctccaagaggtccaccacgacctggatttagacctggattccgacccaga
ggcccccctcctcctggagcatattaccctcctccagccccaggtcagtttccagcccaa
ccagatccaaattactccggtcctccgaactattgggcttaa
DBGET
integrated database retrieval system
