KEGG   Bemisia tabaci (sweet potato whitefly): 109032874
Entry
109032874         CDS       T06019                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
  KO
K12857  Prp8 binding protein
Organism
btab  Bemisia tabaci (sweet potato whitefly)
Pathway
btab03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:btab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109032874
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:btab03041]
    109032874
Spliceosome [BR:btab03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    109032874
 Complex C
   U5 SnRNP specific factors
    109032874
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WDR55 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_DCAF4 Beta-prop_SCAP ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Ge1_WD40 eIF2A Beta-prop_WDR19_1st Beta-prop_WDR75_2nd Nbas_N Cytochrom_D1 Beta-prop_DCAF12 Beta-prop_NWD2_C Beta-prop_VPS8 WD40_like Beta-prop_IP5PC_F Phage_min_tail
Other DBs
NCBI-GeneID: 109032874
NCBI-ProteinID: XP_018900785
LinkDB
Position
Unknown
AA seq 335 aa
MKRKGGELVVQGSGTLEKIQKLDSGIQRTSNLPSPIMALEGHGGEIFCVKFHPDGQFLAS
SGFDRQIFLWTVYENCENISVMSGHTGAVMDLHFSTDGSTIYSCSTDGTLALWDIQRGER
IKKLKGHSTFVNSCYPARRGPELVVSGSDDCSVRIWDARKKNTATVLTNNYQVTAVSFND
TAEQVFSSGIDNDIKVWDLRKNSVLQRLRGHSDTVTGVSLSPDGSYLLSNAMDNSLRVWD
IRPFAPQERCIKVFSGHQHNFEKNLLRCAWMPDGSKVSAGSADRYVYVWDTTSRRILYKL
PGHNGSVNDVSFHPSEPIVASGSSDKVIYMGEIES
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgaaacggaaaggcggtgaattggtcgtacaaggttccggcaccttggagaaaattcag
aaacttgatagtggcattcagaggacttcaaaccttccctcgcctatcatggctttggaa
ggtcatggaggagaaatattttgtgtcaaattccatccagatggccagtttctagcgtcg
agtggatttgatcggcaaatattcttgtggaccgtttatgaaaactgtgagaacatcagt
gtgatgtcaggacataccggggctgtaatggatctccatttctcaacggatggaagcaca
atttactcctgtagcacagacggaactctggccctttgggacattcaaagaggggaaaga
ataaagaaattaaaaggtcacagcacgttcgttaattcttgttatccggcgcgaagaggt
cctgagctggtagtctccggctcagatgactgttcggttcgaatctgggatgctcgaaag
aaaaacacagcaactgtattaacaaacaattatcaagtgacagcagtatctttcaatgac
acagcagagcaagtcttttcgtccggcatagacaatgacataaaggtttgggacttgaga
aaaaactctgttttacaaagattacgcggacactcagatactgttactggtgtgagctta
tctccagatggatcgtatctcctctcaaatgccatggacaactccttgagggtttgggac
attcgaccttttgcccctcaagaaaggtgcatcaaagtattttcaggacatcagcacaat
tttgaaaagaatctattgcgttgtgcatggatgccagatgggtctaaagtatctgctgga
tcagcggaccgttacgtttatgtgtgggacacaacctcccgccgaattctttacaagctg
cctggtcataatggaagtgtgaatgatgttagtttccacccctctgagcccatcgttgca
tctggatccagtgataaagttatatacatgggcgaaatcgaatcataa

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