Bemisia tabaci (sweet potato whitefly): 109033285
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Entry
109033285 CDS
T06019
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
btab
Bemisia tabaci (sweet potato whitefly)
Pathway
btab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
btab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109033285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
btab03041
]
109033285
Enzymes [BR:
btab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109033285
Spliceosome [BR:
btab03041
]
Complex C
Other components
Step II factors
109033285
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
Flavi_DEAD
AAA_30
PhoH
TsaE
Motif
Other DBs
NCBI-GeneID:
109033285
NCBI-ProteinID:
XP_018901390
UniProt:
A0AAI8UU23
LinkDB
All DBs
Position
Unknown
AA seq
1141 aa
AA seq
DB search
MDEVRKLEHLSLVSKICSELENHFGLNDKDLAEFIIDLADKNSDLKSFKAALEENGAEFQ
DSFVENLLRIIHTMRPKSEEKSKSIRNDDALSKKFPGLAIKNDVKRKDVSEIDDAMAALE
ALAPSFGTQTVKDEKPDKKRSGRSRSRDRKDKSKDKNRRSRSRDRSRRSTSRDRRDKRKR
SRSRSRDRHRDRRRSRSRDRTNRRSRSRDRKNRRSRSKERSRDHRDRRRSRSRSRSKDRK
RDVREKKRSRSKSKDRKHREHFRNESPTREVKPVTRLVEKEETALRNPDRPTTLLDLQNS
YEAEEDNSRQRVARISSPEKWEYKQMLAAACIDKSELPDFDEDTGLLPKEASEDEDIEIE
MVEEEPPFLQGHGRNLHDLSPVRIVKNPDGSLAQAAMMQSALSKERREQKMLQREQETSA
QPTGQNKNWIDPLPETDKNPNTSSMRGIGLSTQDLPEWKKHIIGGKKSSFGMKTNLSLLE
QRQSLPIYKLKDELIKAVNDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRR
VAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLVDLDLKSYS
IIMLDEAHERTIHTDVLFGLLKQAVKKRSELKLIVTSATLDAVKFSSYFFEAPIFTIPGR
TFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDILLFLTGQEEIDSACEILYERMKSL
GPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFV
KQKVYNSKTGMDSLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLPTPVPEI
QRTNLATTVLQLKTMGINDLLHFDFMDAPPVESLIMALEQLHSLSALDDEGLLTRLGRRM
AEFPLEPNLSKMLIMSVHLQCSDEILTVVSMLSIQNVFYRPKDKQALADQKKAKFNQQEG
DHLTLLSVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGKNT
VRVQKAVCSGFYRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKE
YMREVTTIDPKWLVEFAPAFFRFSDPTKLSKFKKNQRLEPLYNKYEEPNAWRISRVRRRR
N
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagtaagaaaactcgagcatctatcactggtttcgaagatatgttcagagttg
gaaaatcattttggactaaacgacaaggacctcgctgaatttatcattgatttagcggac
aaaaattcagatttaaagtcattcaaggcagcacttgaagaaaatggagctgaatttcaa
gactcttttgtggaaaatttgctgcggattatccacaccatgcggccgaaatcagaggag
aaatcgaaatccatccgaaatgatgatgccctctcaaaaaaattccccggtttggcaatc
aaaaatgatgtgaagagaaaagatgtgagtgaaattgatgatgcaatggctgctcttgaa
gctttggcaccatcctttggaacccaaactgtgaaggatgaaaaaccagacaagaaaaga
agtggtagaagccgaagtagggatcgtaaagataaaagtaaagataagaatcgacgaagt
aggagcagagacagaagtagaaggagcacaagtcgagatcgtagggataaaagaaaaagg
agtagaagcagaagtagagatcgtcatagagataggcggcggagtagaagccgtgatcgc
accaatagacgaagtaggagtcgtgaccgtaaaaaccgaagaagtagaagtaaagagcgc
agcagagatcatcgagacagaagaagaagcagaagtagaagcagaagtaaggatcgcaag
agagatgtcagggaaaaaaagaggagtagaagcaagagcaaagaccgtaaacatagagaa
catttcaggaacgaaagtccaactagagaagttaaacctgttactcgtctagttgaaaaa
gaggagacagcactgcggaatccggataggccaacaacactattagacttgcagaatagc
tatgaagctgaggaagataacagtcgtcagcgtgttgctcggatctcatccccagaaaag
tgggagtacaaacagatgctagcagctgcatgtattgataagagtgaactaccagatttt
gatgaagacactggtttacttccaaaagaagcatcagaagatgaggacatcgagatcgag
atggtggaagaggagcctccattcctgcaaggccatggtcgcaacctgcatgacttgagt
cctgtaaggattgtcaaaaacccggacgggtcccttgcacaggctgccatgatgcagtca
gcattatcaaaagagcgtcgtgagcagaagatgcttcagcgtgagcaagaaactagtgcc
caaccaaccggacaaaataaaaattggatcgatcctcttcctgaaacagacaaaaatccc
aacacaagcagcatgcgtggaattgggctcagtacacaagacttgccagagtggaaaaaa
catatcataggtggcaaaaaaagctcttttggcatgaaaaccaacttatctctccttgaa
cagaggcaaagtctacccatctacaaactcaaagatgagttgattaaggctgttaatgac
aatcagattctaattgttattggtgaaacagggtctgggaagacaacccaaatcacgcag
taccttgctgaggctggttttactgcacgagggaaaattggatgtactcaaccgagaaga
gttgctgctatgtcagttgccaaacgagttgctgaagagttcggttgtcggcttgggcag
gaagttggttacacgattcggtttgaagactgcacaagccctgaaactgtcattaagtat
atgactgatggtatgttacttcgagaatgtctagttgatttagacttgaaaagttattca
ataatcatgttagatgaagcccatgagaggacaatacacactgatgttctttttggactc
ctcaaacaagctgtgaaaaaacgctcggagttgaagctcattgttacatccgcaacactc
gatgcagttaagttttcatcgtacttttttgaagcccctattttcactattcctgggcgc
acattcccagtagaagtcctgtacaccaaggaaccagaaacagactatctagatgcgtca
ttaataacagtcatgcaaatacacttacgagagccaccgggtgatattctcctgtttttg
acaggacaagaggaaattgactcagcttgtgaaatactttatgagcgaatgaagtcattg
ggtcctgatgtacctgagctaattatcttacctgtctattctgctcttccaagtgaaatg
cagacaagaatctttgaagcagctccaccaggatcaaggaaagttgtcatcgcaaccaat
attgctgaaacctcattaacaattgatggaatattttatgtagtagatcctggctttgtc
aaacaaaaggtatacaattcaaaaactggaatggactcgttagtcgtaactcctatttct
caagcccaagcaaagcagcgtgctggccgtgcaggacgaactggccctggaaagtgctat
cgtctgtacacagagcgagcataccgtgatgagatgctccctactcctgtgccagaaatc
cagcgcacaaatcttgcaactacagtcctccagctgaaaacaatgggaatcaatgatctg
ctacactttgacttcatggatgcgccaccagttgaaagtttgatcatggcattggaacag
ctgcattcattgagtgcattagatgatgagggattgttaacacggcttggacggcgtatg
gctgagtttccattggagcccaatttgtccaagatgctaatcatgtcagttcatctgcag
tgctcagatgaaatcctcacggttgtctccatgttatctattcagaacgtattttacagg
cctaaagacaagcaagctttggctgaccagaaaaaagctaagttcaatcaacaagagggt
gatcatttaactcttttatcagtctacaattcatggcggaataacaaatttagcaatgca
tggtgttatgaaaactttgtgcaaattcggactctgaagagggcacaagatgtccgcaaa
cagttgcttggaatcatggaccgacacaagttggatgttgtctcagctgggaagaatact
gtcagagtccagaaagccgtgtgttctggcttttaccgcaatgcagcaaaaaaagatccg
caagaaggataccggacactagttgacagccaagtagtctacatccaccctagcagtgct
ctatttaatcggcaaccagaatgggtaatctaccatgagctggttcaaacaacaaaggaa
tacatgcgtgaagttacgactattgatccaaagtggctggtggaatttgcgccagcattc
ttcaggttttctgacccaactaaacttagcaagttcaaaaagaatcaacgtttggagcct
ttatacaacaagtatgaggaacctaatgcatggaggatatccagagttcgcaggcgtcgt
aattaa
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integrated database retrieval system
