Bemisia tabaci (sweet potato whitefly): 109033652
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Entry
109033652 CDS
T06019
Name
(RefSeq) endoribonuclease Dcr-1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
btab
Bemisia tabaci (sweet potato whitefly)
Brite
KEGG Orthology (KO) [BR:
btab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
btab03036
]
109033652
Chromosome and associated proteins [BR:
btab03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
109033652
microRNA pathway
RISC loading complex
109033652
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_dsRBD
Dicer_platform
Dicer_dimer
Ribonucleas_3_3
PAZ
Helicase_C
Dicer_PBD
DEAD
ResIII
Motif
Other DBs
NCBI-GeneID:
109033652
NCBI-ProteinID:
XP_018901898
UniProt:
A0A9P0F076
LinkDB
All DBs
Position
Unknown
AA seq
2421 aa
AA seq
DB search
MAQYLYDSIHTKSFTPQEFQVELLNAAKKRNIIACLGQQSSKSFVALKLIQESAINVRRC
SQRERKYIFYVLEKKEDILIHYSRLIHLTDLNCVEFLNPESARDDLLSAKNHANVLIMTY
ETLFKLVCTHSVVSAKDIHLLILDECHLAIEPKHFLSRTMPYLLKSPVDLDRILGLTSPL
FLSGAVHPGKVEAQVKRLEKIIHAKAETASEIVSALRYCPKPRKLIIECASMKIVPEKDS
TVDKIVNDSAELLAFLEDHRYDPAEIYDEEFLDEIKDIPDPKSDPIQIVNDFLEILHTLG
LWCADKAALLLYFRIEKLKVKTPYERHYLLLCLVSSLMLKVRALLQEAFESTSEKERIFK
HSSNKILRLIEIISQYKPMKSKAELEEEFSKLEGISDSQLNTGRIEETSEEEEKNEKQET
IMNDICSNLKTPSQDCCGSDVKESSGISNLEMDTSNNCSKTVNVFSKQHDANFSEEALEL
YFKMKSDNSSISNNLKHDNILDSENEVFPKRTIFNQILNSETNTNLSCSPISDFIKNQNK
SVNIYESKLCDNRTCFSDCDKNDWNFYQSYDPSYIKESSSDEEKLGEITFPTHNLQLIKS
SPEKFSLTGCEVWKQNKEISNHIVVAKDSNCVSFSDTSKQWSDDGDSNSSVASIREMKFQ
DQPKPEAHGNVSLIDNERKCVAQLENNSERIEASSKMWNDKCMDSVVSSVNNDLSMMSFS
NLSVINGRDNNDEPTLTFNENLPPTVTACDNKSLTTSLSSYNSNLTYNQNSKLLNRRKNW
RHDPNAPQRLTTYKLLSLDITECICGLIFVKDKFIAKILYHLLNELRKSDEDFWWLAPQY
TVCKSADPVKEPQEADLEHQKQEEVLKRFRMRDCNVLIGTAVLEEGMDLPKCNLVIRFDP
PDKYKSYALSRCRARAPDSSYILLVDHQISKSFIQSVAHYTEIDNMLLNRCANFEPTDAE
EKEADSYNDAILCYQPIPGEDLPSVSLNTAIAVINRYCAKLPSDTFTRLVPLWSIKTIEF
AGKLMSYCIVQLPINSPVKHDIIGHPMPTPVLARRVAALEACRVLHQAGELDNCLQPIGK
ESFRLLENTEFEEPPDEVDQSIPWDSLEPRPGTTKRRQYYYKRIASVFNYCRPGVGDNAL
LYFISMTLTCPIPEEQNTRGRKLHPPENSPQGFGILTLKPIPKICSFPIFTRCGEVEIKL
KLCPGYIHLNEEQLNKITTFIHYTFTNVLRLQKYLMMFDPGASENSFFIVPTKKADGSGI
DSVHIDWDFLDIILQRGNEKPRLIPEEERISFKFNEQLYADAVVTPWYRNQDQPQYFYAA
EICFQLNPRSLFPGSDYKTFEEYYRRKYGINIQNKEQPLLDVDHTSARLNFLTPRYVNRK
GVALPTSSEETKRAKRENLEQKQILIPELCMVHPFPASLWRKAVSLPCILYRINALLLAD
EIRSLVATEISLGSRDLSPDFEWPALDFGWRLSDVLKKSLEEKSGRDLKPLNDKECNEPC
NELLSQEMRNNGLEEKESCNGSENDQKILEGEAATKNGENKEFSADEPKEDSEKAEAEEE
NGKGSSDEDSGGWNVEIGTWSNDMAGEFGLPDNITMIRYGSPTSWLCKGRSKEGMNLTDD
MDSGDDSNSMADSLPDMLMGATTDDDDNDENNKGLKIEFKNDYLAEALETDDHFVDMKAV
THESEWKWDFDTGDNDVDVLTEINRFEEATAENILEIESSGMFVKLDEPAHIFRPLNKQL
WSQKALTGANDFPVDEQKAPKTENIIPHISGSTLENSYQSSSVNNYCTIKNLDERTPQPL
TVSACVVDSSLPAKQTESSSSVKKLPFILGPETGYGMPQEIAEKLQKESCPPNPCPSPRD
YEAGDDSGSLSESSDALDFSFDLQPDLDNIPGPNPSLLLQALTMSNANDGINLERLETIG
DSFLKYAITVYLYCTYENIHEGKLSHLRSKQVSNLNLYRLGKRKVFGESMIATKFEPHDN
WLPPCYYVPRELEQALIEVGMPASSWNQADLPALRDMSPDKIREVVQEQLVNTLTCLDSI
PLDRLPCFVPYNLITQHSIPDKSIADCVEALIGAYLIACGPRGALLFMSWLGIRVLPWKE
VECINPEQSVNHVGCMLNKDNKMVEYTDIKQPSSPLIRNLPNANAEMNKLLDGFDVFERN
IHYRFSDRSYLLQAMTHASYFPNRFTDCYQRLEFLGDAVLDYLITRHLYEDKHRHSPGEL
TDLRSALVNNTIFASLAVRHGFHKFFLHLSPGLAEVVERFVRIQEENGHAINEEYYLIGE
EECEEVEDVEVPKALGDVFESVAGAVYLDSSMSLDKVWEIYFRMMKSEIERFSTNVPKSP
IRELLELEPETAKFSKPEKLTDGRRVRVTVEVFGKGAFKGIGRNYRIAKCTAAKCALRQL
KKKGLLSRKVNCMNLPNHSLP
NT seq
7266 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagtatctgtatgatagtattcataccaaatcattcacaccacaggagtttcag
gttgaattgctcaatgccgcaaaaaagaggaacatcattgcctgtctgggacagcaatcc
agcaaatcttttgtcgcactcaagcttattcaggaatccgctatcaatgttcgccgatgc
agtcaaagggagaggaaatacatattctatgtattggaaaagaaagaagatatcttgatt
cattactcccgcttgatacatttgactgatctgaattgtgtagaatttttaaatcctgag
tctgcccgggatgacttattgtccgcaaagaatcatgctaacgtcttgattatgacttat
gaaacgttattcaagttggtttgcacacactctgttgtctcagcgaaggatatacatttg
ttgattttggacgaatgccatttagccatcgagccgaagcactttctcagtcggactatg
ccatacttactgaagagtcctgtagacctagatcgcatcctcgggttgacatcaccgtta
ttcctttctggagctgttcatcctggaaaagtggaagcccaggtgaagcgtttggaaaaa
ataatccatgccaaagcagaaactgcctcagagattgtctcagctcttagatattgcccc
aaaccaaggaaactaatcattgaatgtgcttccatgaaaattgttcctgaaaaagattca
actgtggataaaatagtcaacgactctgctgaacttcttgcattccttgaagaccacaga
tatgatccagccgaaatttatgatgaagaatttcttgacgaaataaaggacattcccgat
ccaaaatctgatcctattcaaatcgtcaatgatttcctagaaatacttcacactttaggt
ctgtggtgtgcagataaagctgccctcctactatattttaggatagaaaaattgaaggtg
aaaactccctatgaacggcactatcttttactctgcctcgtcagttccctcatgttgaaa
gtcagagctttactgcaagaagcattcgagtccacttcagagaaggagcgcattttcaaa
cactcatcaaataaaatccttagattaatagagataattagtcagtacaaaccaatgaag
tcaaaagctgagttagaggaagaatttagtaaattagagggtatctctgattcgcaacta
aatactgggcgcattgaagagaccagtgaggaagaggagaaaaatgaaaagcaggaaaca
ataatgaatgatatttgtagtaacttaaaaaccccgagccaagactgttgtggctcagac
gtgaaagaaagtagtggtatatccaacctggaaatggatacttcaaataattgttccaaa
accgtaaacgtattttccaaacaacatgatgctaattttagtgaagaagctttagaattg
tattttaagatgaagtctgataacagttccatatcgaataatctcaagcatgataatatt
ttagacagtgaaaatgaagtttttcctaaaagaactatctttaatcaaattttaaatagt
gaaacaaatactaatttatcatgttcaccaataagtgattttatcaaaaatcaaaacaaa
agtgtaaatatttatgaaagtaagctttgtgacaatagaacttgtttctccgattgtgat
aaaaatgactggaacttttaccaaagttacgatccatcatatatcaaagaatcatcgagt
gatgaggagaagcttggtgaaattacatttcccactcataatttgcagttgataaaatca
tcgccagaaaagttttctctcactggttgtgaagtatggaagcaaaataaggaaatttct
aaccacattgttgtagccaaagattcaaattgtgtatccttctcagacacttccaaacag
tggtctgatgatggagattccaactcaagtgttgcatcgatcagggaaatgaagttccaa
gaccaacccaaacctgaagctcatgggaatgtatcactaattgacaatgaaagaaaatgt
gtcgctcagcttgaaaataatagtgaaaggattgaggcctcatcaaaaatgtggaatgat
aaatgcatggatagtgtcgtatcatcagtaaataatgatttaagtatgatgtctttttca
aatttatctgtgataaacggtagagataataatgatgaaccaactcttacatttaatgaa
aacctaccaccgactgttactgcctgtgataataaatccttaaccactagcttaagtagt
tataattcaaatcttacttataatcaaaattcgaaattgttgaacaggaggaaaaattgg
aggcatgacccgaatgccccacaaagactcacaacctataagttgttatccttggatatc
actgaatgtatctgtggtttaatatttgttaaagataaatttatcgccaaaatattgtac
cacctattgaacgagttacgaaaatctgacgaagacttttggtggttagcgcctcagtac
acagtctgcaaatcggctgatccagtgaaggagccgcaagaagcagacttagagcatcag
aagcaagaagaagtcctgaaaagatttcgcatgagagattgcaacgttcttataggcaca
gccgtcctagaggaaggaatggacctaccaaagtgtaacctggtcattcgatttgatcct
cctgacaagtacaaatcatatgcactctcccgatgcagagcccgtgcacctgattcttcc
tacattcttcttgtagaccaccagatctcaaaaagtttcatccaaagtgttgcccattat
actgaaattgacaatatgttgctaaatcggtgtgcaaattttgaacccactgatgcagaa
gaaaaagaagccgactcatacaatgacgctattctttgttatcaaccgataccaggagag
gacttaccctctgtttccttgaacactgccattgctgtgatcaacaggtactgtgccaaa
ctacctagtgataccttcacaagactagtaccgctatggagtattaaaactatagaattt
gctggcaagctcatgagctattgcattgttcagttacccatcaattcaccggtcaagcac
gatattattggccatccaatgccaacgcctgttcttgctaggcgagttgctgccctggaa
gcttgcagagttcttcaccaagctggggaattagacaactgtcttcaacctattgggaaa
gaaagtttcagacttctggagaacactgagtttgaggaacctccagatgaagttgaccaa
agtatcccttgggactccttggagccaagacctggaaccaccaaacggagacagtattac
tacaaacggattgcttctgtattcaattactgtcgaccaggagttggtgacaacgcactt
ctgtattttatcagtatgactctgacctgtcctatcccagaggagcaaaacacaagagga
aggaagttgcacccacctgaaaattctccccagggttttggaattttgactttgaaaccc
attccaaagatctgctcctttccaattttcacccgttgcggtgaggtagaaatcaagttg
aaactatgtcctggttacatccatttgaatgaggagcagctaaataaaatcaccactttc
atacattacacttttacaaatgttttgagactgcagaaatatctgatgatgtttgatcca
ggagcctcagaaaactcatttttcatcgtcccaacaaagaaagcagatggtagtggcatt
gactcagtgcacatcgattgggacttcttggatatcattttacaacgaggaaatgaaaaa
ccacgtttgatacctgaggaggaaaggatttcattcaaattcaatgagcagttgtacgca
gatgctgttgttaccccttggtatagaaatcaagaccaacctcaatatttctatgccgca
gaaatatgcttccaattaaatcctagatctttgttccctggatcagactacaaaactttt
gaggagtattacagaagaaagtatggtataaacattcaaaataaagaacagccacttcta
gacgtggatcatacctctgctcgccttaatttcctgacgcctaggtatgttaatcggaaa
ggagtagcattgcccactagcagcgaagaaactaaacgagcaaaacgtgagaatcttgaa
cagaagcaaatcctcattccagaactatgtatggtacatccattccctgcatctctttgg
agaaaagcagtttctttaccatgcattttgtatcgcattaatgctctccttttggctgat
gagatccgatctttagtggccacagagatatcgctaggctctagagatctttcgccagat
tttgagtggcctgctttggattttggatggcgactgtctgatgttctgaagaagtcacta
gaggaaaagtcaggacgagatctgaagccgttgaatgataaagaatgtaatgagccctgc
aacgaattgctctctcaagaaatgagaaacaatggcttggaggagaaagaatcgtgtaat
gggtctgaaaatgaccagaaaatacttgaaggggaggcagcaaccaaaaatggagagaac
aaagaattcagtgcagatgagccaaaggaagactctgaaaaggcagaagctgaggaggag
aatggaaaaggatcgagtgatgaagacagtggagggtggaatgttgaaatcggaacttgg
tccaatgacatggcaggagaatttggtcttccagataacattaccatgattcgttatggg
tccccgaccagctggctttgcaaaggaagaagcaaagagggaatgaatctaaccgatgac
atggactcaggagatgacagcaatagcatggccgattccttgcctgacatgctgatgggg
gcaaccactgatgatgatgacaatgatgagaacaataaaggtttgaagatagagttcaaa
aatgactacctggctgaagccctagaaactgatgaccattttgttgatatgaaagctgta
actcatgagtccgagtggaaatgggactttgacaccggtgacaacgatgtggatgtattg
acagagatcaacagatttgaggaagcaacagcagaaaacatattggagattgagtccagc
ggcatgtttgtgaagttggatgaaccagctcatatttttcgacctttaaacaagcaactc
tggagccaaaaagcattgaccggggccaatgattttcctgttgatgaacagaaagcacca
aaaactgagaatatcattcctcacatttctggctctacactggaaaatagttatcaaagt
agctcagtgaataattattgcacgattaaaaacctggatgaaagaacccctcaaccactg
acagtttcagcatgtgttgtggacagctcactgcctgccaagcagacagagagctcatca
tcagtgaagaagttaccatttattttaggtcctgaaacaggatatggtatgccacaagag
atagcggagaagctccaaaaagaatcctgtccaccaaatccttgtccatctcctcgggat
tatgaggcaggagacgactcaggatctctatctgaatcatcagatgctttagacttcagt
tttgacctgcaaccagacctagacaatattccaggaccaaatccaagtttattattgcaa
gctttaactatgtccaatgctaatgatggtatcaatcttgagcggttggaaacaattggt
gattcatttttgaagtacgcaatcaccgtttacctgtactgtacttatgaaaacatccat
gagggaaaactgagtcatctgaggtcaaaacaagttagtaatttgaatttgtatcgatta
ggaaaacggaaagtattcggcgagagtatgatagcaactaagtttgagccacatgataac
tggcttcctccatgctattatgtacctcgagaactggaacaagctttgatagaagtagga
atgccggctagttcatggaatcaagcagatctcccggctctcagggacatgtcgccggac
aaaatcagagaagtcgttcaagaacaactggtgaacacattaacttgtcttgactctata
ccgttggataggttgccttgtttcgtaccttacaatctcattacacaacacagtatacca
gataaaagcattgcagattgtgttgaagcccttataggtgcatatttaattgcttgtggt
ccaagaggagcattactttttatgtcctggcttgggatccgagtgttaccatggaaagaa
gtcgagtgcataaatcctgagcaatcagtgaaccatgttgggtgcatgctaaacaaagat
aacaaaatggttgaatacacggacataaaacaaccaagttcaccattaatccgcaatctt
ccaaatgctaatgcagaaatgaataaattactggatggttttgatgtgtttgaaaggaac
attcattatcgcttctctgatcgtagctaccttttacaagcaatgacccatgcctcatat
tttccgaaccgatttacggactgttaccagcgtttagaattcttgggtgatgctgttcta
gactatctaatcacaaggcatctgtacgaagacaagcacaggcactcgccaggagaacta
accgatttacgctcagcattggtgaacaatacaatttttgcctctctagctgtaagacac
ggttttcacaaatttttcctgcatctttcacctggtcttgccgaagttgttgaaagattt
gttcggatccaggaagagaatggacatgctatcaatgaagaatattatttgattggagag
gaagaatgtgaagaagttgaggatgtggaggtaccaaaagccttgggtgatgtttttgaa
tcagttgctggagctgtgtatctggacagcagtatgtctttagataaagtgtgggaaatc
tacttccgcatgatgaaatcggagattgaacgattcagcacaaatgttccaaagtcaccc
attagagaattacttgaacttgaaccagaaacagccaaattcagtaaaccagaaaagttg
actgatgggcgacgagtacgagtaactgtggaagtctttggaaaaggtgccttcaaaggc
attggacgaaattatcgtatcgctaagtgcactgctgcaaaatgtgccttacgacaattg
aagaaaaaaggtcttctatctcgaaaagtgaattgtatgaatttaccaaaccattctctt
ccatga
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integrated database retrieval system
