Bemisia tabaci (sweet potato whitefly): 109034152
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Entry
109034152 CDS
T06019
Name
(RefSeq) SWI/SNF complex subunit SMARCC2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
btab
Bemisia tabaci (sweet potato whitefly)
Pathway
btab03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
btab00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109034152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
btab03021
]
109034152
03036 Chromosome and associated proteins [BR:
btab03036
]
109034152
Transcription machinery [BR:
btab03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109034152
Chromosome and associated proteins [BR:
btab03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109034152
PBAF complex
109034152
GBAF(ncBAF) complex
109034152
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
BRCT_2
SCHIP-1_C
Motif
Other DBs
NCBI-GeneID:
109034152
NCBI-ProteinID:
XP_018902694
UniProt:
A0A9P0ADF4
LinkDB
All DBs
Position
Unknown
AA seq
952 aa
AA seq
DB search
MLAFGPKKDGGPNIKFYESPETVAAFDGIRSWLQKNYKKYTQNDPPTNKSLSTLVTQLIQ
FQEDNLGKDVTKPSLTRLPMRLFLDFKPGGALSHILATVYKFKSDQGWRRFDFQNPSKQE
RNLEMFTKVEKALIDNKFLSLPNVFIKPEVDKPIQSRVKEIIKKHQGTITENEEEASHII
FPVTDPLDEEYARPTVKRDRMVLMHWYYFPDSHDSWLPASDLPIDAPETPPSHTGVWRVS
ASWVLDLDQYNEWMAEEDYEVDENGKKKVHRLRLSVEDLMGGGGDPDKAKKKHKRKRSPS
PPPKQLGKRKSSSKKPRGDEDGDDLTKDMPEPTPEPNIAEVSVPKQGVSSKKDSDSQPLK
TGTLADLDEDMDKGEDSEMGKMSDTTTQDTTVKDEGQEDNVTEQTHHIIIPSYSAWFDYN
SIHSIEKRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYITSTASRRNLAGDVCS
IMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLSDTPSGLQPVNPPKTPQPSAAK
TLLDLEKKPEATPISKLETDPNFGLRVDQYVRKPGVMKNKTAASLTREWTEQETLLLLEA
LELYKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDPEAGGGALGPLAYQPIPFSKA
GNPIMSTVAFLASVVDPRVASAAAKAAMEEFANIKDEVPAALMDAHIKNVEASTRDGKFD
PAAGLVQSGIAGTAPEKEEEEDKEKKEAKEKETNGEKEPEKPAADGEVKEIKKEEEEKKE
ASTGEGVAETDGNKDVEMKDASDKKETSKEETEQDRVIKDAQLQSAASAALAAAAVKAKH
LAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFH
LEQLKAAEFRARQQAHQRLAAEQQQQTPSTTPTPLSPQAVATPQPPATPMAT
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgttagcttttggacccaagaaggatggtggtccaaacatcaagttttacgaatctcca
gagactgtcgctgcatttgacgggattcgatcatggttgcagaaaaactacaagaagtac
acccaaaatgacccgccaaccaataaatctctatcaacccttgtaacgcagttaattcag
ttccaagaagacaatctgggaaaagatgtcaccaaaccatctctcacccgacttcctatg
cgtttgtttttggattttaagcctggaggagctttatctcacattctggcaactgtttat
aaattcaagagtgaccagggttggcgaaggtttgattttcagaatccatcaaaacaggaa
cggaatcttgaaatgttcacaaaagttgagaaagcgctaatcgataacaaattcctcagc
ttgcccaacgtcttcataaaaccagaagttgacaaacccattcagtctagagtgaaggaa
ataatcaagaagcatcagggaacaataactgaaaatgaagaggaggctagtcatataatt
ttcccggtcactgatccactagatgaagagtatgctcgtccaacagtgaaacgagatcga
atggtccttatgcattggtattatttcccagactctcatgattcttggttaccagcatct
gatctcccaattgacgcaccagaaactccaccgtctcacacaggagtttggagggtttct
gcatcatgggtgttggatttggatcagtataacgagtggatggctgaagaagattatgaa
gtggatgaaaacggcaagaagaaagtccatcggttacgattatcagtagaagacctgatg
ggcggaggaggagaccctgacaaagcaaagaagaaacacaaaaggaaaagatctccatca
ccaccacccaagcaactggggaaaaggaaaagttctagcaaaaaacccagaggggatgaa
gatggcgatgatttgacaaaagatatgcctgagccaactccagagccaaacatagctgaa
gtctctgttcctaaacaaggtgtgtcatctaaaaaggacagtgactcgcagcctttgaaa
acaggaactctagctgatctggatgaagatatggataaaggagaagacagtgaaatgggc
aaaatgtctgatactactactcaggatacaactgtaaaggatgaagggcaagaagataat
gtcactgaacagacacaccacataattattccaagctattctgcatggtttgattacaac
tcaattcactcaattgagaagagagctctgcccgaatttttcaatgggaagaacaaatca
aaaactcctgaaatctatctagcatacagaaactttatgattgacacttaccgcctcaat
cctaccgagtacataactagcactgcatcaagaagaaatttagctggtgatgtttgctca
atcatgagagttcatgcatttttagagcaatggggactcatcaactatcaagtggatgct
gaaagccgtccaacaccaatgggtcctcctccaacctctcacttccacgttctctcagat
acaccctcaggtcttcagccagtcaaccctccgaaaacaccgcagccttctgctgctaaa
acgttacttgacctagagaagaaaccagaagcaacgcccatctccaaacttgaaacagat
cccaactttggactcagagtagatcagtatgtaaggaaacctggggtcatgaagaataaa
actgcggccagtcttacgagagagtggacagagcaagaaacactgcttttgcttgaagca
ctcgagctttacaaggatgactggaacaaagtctgcgaacatgtaggaacaagaactcaa
gacgagtgcattctgcatttcctacgactcccaatcgaggatccctacctcgaagaccct
gaagccggtgggggcgcccttggaccgttagcttatcaacccatcccatttagtaaagct
ggaaaccccattatgtccaccgtagcttttctagcctctgttgttgatcctcgagtcgcc
tctgcagccgccaaagctgcgatggaagaatttgcgaacataaaggatgaagtccctgct
gctctgatggatgcccacattaaaaatgttgaagcttcaactcgagatgggaaattcgat
ccggctgctggtctcgttcagagtggcatagctggaactgccccagaaaaggaagaagaa
gaggacaaggagaagaaggaagcaaaagaaaaagaaacaaatggagaaaaggaaccagaa
aaacctgcagctgatggggaagtgaaagaaatcaaaaaggaagaagaagaaaagaaagaa
gcctcgacaggagagggagtcgcagaaacagatggaaacaaagatgttgagatgaaagat
gcctctgacaagaaggaaacatccaaagaagagacagagcaggacagagttatcaaagat
gcacagttacaatcggctgcatcagcagcactcgctgctgcagctgtgaaagctaaacac
ctagcagctgttgaagaacggaagattaaatctttggtagctttactcgtagaaacgcaa
atgaaaaagttagaaattaagttaaggcactttgaagagcttgagactacaatggagcga
gaaagagaaggtctggagtatcagcgtcaacaattgattacggaaaggcaacagtttcat
ttagagcagttgaaagcagcggaattccgtgcaaggcagcaggctcatcaacgccttgca
gctgaacagcagcaacaaacaccatcaacaaccccgactccattatcacctcaggctgtt
gctacgccgcagcccccagcaacacctatggccacgtaa
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