KEGG   Bemisia tabaci (sweet potato whitefly): 109034311
Entry
109034311         CDS       T06019                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
btab  Bemisia tabaci (sweet potato whitefly)
Pathway
btab03013  Nucleocytoplasmic transport
btab03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:btab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109034311
  09122 Translation
   03013 Nucleocytoplasmic transport
    109034311
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:btab03019]
    109034311
   03041 Spliceosome [BR:btab03041]
    109034311
Messenger RNA biogenesis [BR:btab03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     109034311
Spliceosome [BR:btab03041]
 Complex C
  Other components
   EJC/TREX
    109034311
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    109034311
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st ANAPC4_WD40 WDR55 WD40_Gbeta EIF3I Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_WDR19_1st Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_IFT122_1st WD40_MABP1-WDR62_2nd Tricorn_2nd eIF2A Beta-prop_HPS5 Beta-prop_EML Beta-prop_WDR36-Utp21_1st NBCH_WD40 RMC1_N WD40_MABP1-WDR62_1st PD40 Beta-prop_WDR35_TULP_N WDR90_beta-prop_4th Beta-prop_TEP1_C WD40_RFWD3 Peptidase_S9_N Beta-prop_DCAF12 Beta-prop_SCAP Beta-prop_ACSF4 Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_ELP1_1st DPPIV_N KNTC1_N Beta-prop_Nup120_160 Tricorn_N Beta-prop_WDR41 baeRF_family5
Other DBs
NCBI-GeneID: 109034311
NCBI-ProteinID: XP_018902931
UniProt: A0A9P0ABH0
LinkDB
Position
Unknown
AA seq 331 aa
MTNWVSSQADKFKEHFKKHDVIKEYQAHTAKVHSIGWSCDGKRLASGSFDKTVTIFTLDR
DRLNKEFTFKGHGGSVDQLCWHAKNPELLCTASGDKTVRVWDTRTQKCPATVHTKGENMY
ITWAPDGNTIAVGNKEDLVTFIDARMYKIRAEQQFAFEVNEISWNNDSNLFFLTNGQGCI
HILSYPDLELQKIVKAHPVTCICIEFDPLGRYFATGSADAVVSLWDVHELACIRTFYRLD
WPVRALSFSHDGNLLAFASEDLVIDIAEVETGIKVADVVVEAATFTIAWHPSQYLLAYAC
DDKVAYDRKKDSGNLKVFGFQNDKLFNVFNP
NT seq 996 nt   +upstreamnt  +downstreamnt
atgactaattgggtcagcagtcaagcagataaattcaaggaacatttcaaaaaacacgat
gtgataaaagagtaccaagcgcacaccgccaaagttcattccattggatggagctgcgat
ggtaaacgtttggcctcaggatcctttgacaaaacagtaaccatttttacattggataga
gacagactgaataaagagttcacttttaaaggtcatggaggaagcgtcgatcaactatgt
tggcatgccaaaaatcctgaacttttatgtactgctagtggtgataaaacagttagagta
tgggataccagaacacagaagtgtcctgcgactgtccatacaaaaggtgaaaatatgtac
ataacttgggcaccagatgggaataccattgctgtcggaaacaaagaagatctagtaaca
ttcattgatgccaggatgtacaaaataagggcagaacaacaatttgcatttgaagtcaat
gaaatctcatggaacaacgatagtaatttattcttcctgacaaatggtcaaggttgcatt
catattttaagctatcctgatcttgaacttcaaaaaatagtaaaagcgcaccctgtaacc
tgcatttgtatagaatttgatcctctcggacggtattttgcaactggatctgctgatgct
gtcgtttctttgtgggacgtccatgaacttgcttgtattcgaacattttataggctggat
tggcctgtcagagcacttagtttttcccatgatgggaatttgttggcgtttgccagtgaa
gacttagtgattgatattgcggaggttgaaacaggaatcaaagttgccgacgttgttgtt
gaagctgcaacgttcaccattgcatggcatcccagtcaatacctgttggcatacgcttgt
gatgataaagttgcgtatgaccgcaagaaagactctggaaatctcaaggtgtttgggttc
caaaatgacaagttattcaatgtgttcaatccatga

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