Bemisia tabaci (sweet potato whitefly): 109034638
Help
Entry
109034638 CDS
T06019
Name
(RefSeq) pre-mRNA-processing factor 6
KO
K12855
pre-mRNA-processing factor 6
Organism
btab
Bemisia tabaci (sweet potato whitefly)
Pathway
btab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
btab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109034638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
btab03041
]
109034638
Spliceosome [BR:
btab03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
109034638
Complex C
U5 SnRNP specific factors
109034638
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP1_N
TPR_14
TPR_19
HAT_PRP39_N
TPR_17
Suf
TPR_16
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_2
TPR_8
TPR_1
FAT
ARM_TT21_2nd
TPR_21
TPR_CcmH_CycH
TPR_12
TPR_9
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
109034638
NCBI-ProteinID:
XP_018903430
UniProt:
A0A9P0F7A8
LinkDB
All DBs
Position
Unknown
AA seq
927 aa
AA seq
DB search
MNPPPTINKNKKHFLGIPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAPPSKR
KKKEEEEDDEEDLNDSNYDEFSGYGGSLFSKDPYDKDDEEADMIYEEIDKRMDEKRKEYR
EKRLREELEKYRQERPKIQQQFSDLKRGLTTVSEDEWKNVPEVGDARNRKMRNPRAEKFT
PLPDSVLSHGLGGETAAAIDPKSGLMSQIPHGALTPGMLTPTGDMDLRKMGQARSTLMNV
KLSQVSDSVEGQTVVDPKGYLTDLQSMIPSYGGDINDIKKARLLLKSVRETNPNHPPAWI
ASARLEEVTGKIQAARNLIMKGCEENPNSEDLWLEAARLQPPETAKAVIAQAVRHIPTSV
RIWIKAAELETEAKAKKVFRKALEHIPNSVRLWKAAVELEEPEDARILLSRAVECCPTSV
DLWLALARLETYENARKVLNKARENIPTDRQIWTTAAKLEEANGNINMVEKIIDRAISSL
TANGVEINREHWFKEAIEAEKAGSVHTCRALIKAIIGYGIEEEDRKHTWIEEAESCANQG
AYECARAVYSHALGVFPSKKSIWLRAAYFEKNHGTRESLESLLQRAVAHCPKSEVLWLMG
AKSKWMAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENSEYERARRLLAKARASAPT
PRVMMKSAKLEWYLEKYDLALKLLADAIQVFPDFAKLWLMKGQIEEQLNRPDDAHATYNE
ALKKCATSIPVWLMLARLAERRKMLTKARSYLEKGRLRNPNNPELWLEAIRIEFRAGLRD
IANTLMAKALQECPNAGILWAEAIFLEPRPQRKTKSVDALKKCEHDAHVLLAVSKLFWCE
RKITKCREWFNRTVKIDPDLGDAWAYFYKFELLNGTEESQQDVKKRCIAAEPHHGEQWCK
VSKLIQNWKLTTESILPLVAKELPIPI
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgaatccacccccaacaatcaataaaaacaaaaagcattttctgggtattcctgcaccc
cttggatatgttgctggtgttggtcgaggtgccactggttttacgacccgatctgatatt
ggtcctgctcgtgatgcaaatgatgtctccgatgatcgtcatgctcctccaagtaaacgc
aaaaagaaagaggaggaagaagatgatgaggaggatctaaacgactcaaactacgatgaa
ttttctggttatggtggatccctcttcagcaaggatccatatgacaaagatgatgaggaa
gccgatatgatttacgaagagattgataagagaatggatgagaagaggaaagagtaccgt
gaaaagcgtctgagagaagagttggaaaaataccgtcaagaacgtccaaagatccaacag
cagttcagtgatctgaaaagaggactcactaccgtctcggaagatgagtggaaaaatgta
cctgaagttggggatgcccgtaatcgaaaaatgaggaacccgcgtgctgaaaagttcaca
ccgttacctgactccgttttatctcatggtttgggtggtgaaactgccgctgccattgat
cctaagagtggacttatgagccaaatacctcatggagcccttactcctggtatgctaact
cccactggggatatggatcttcggaaaatgggacaagctagaagcactttgatgaatgtt
aagctgagccaagtttctgattcagttgaggggcaaacggtcgttgaccccaaagggtac
ctcacagatttacaaagcatgattccatcatatgggggtgatatcaatgatatcaagaaa
gctcgtttactcttgaagtcggtccgtgaaacaaatccgaatcaccctcctgcctggatt
gcctcagcgcgtttagaagaagtaactggtaaaatacaagcggcaaggaatttgatcatg
aagggatgtgaagagaatccaaactcagaagacttatggctcgaagctgcccgactccag
cctccagagacagccaaagctgttattgctcaggcagttagacatatccccacatccgtc
aggatttggattaaagctgcagagctagaaacagaggcaaaagctaagaaagttttcaga
aaagccttggaacatattcctaattctgtacgtttgtggaaagcagctgttgagttggaa
gaacctgaagacgcccgaatattgctaagtcgtgctgttgaatgctgcccaacaagtgtt
gatttgtggcttgccttagctcgactggaaacttacgaaaatgcgcgtaaagttttgaac
aaagctcgagaaaatattcccacagacaggcaaatttggaccactgctgcaaaacttgaa
gaagctaatggaaacatcaatatggtagaaaaaatcatagatcgtgcgatttcatctctc
accgccaacggggttgaaatcaatagggagcattggttcaaagaagctattgaagcagaa
aaagctggctctgtccatacatgcagggctttaatcaaagctatcattgggtatggtatt
gaagaagaagatcgcaaacatacatggatagaggaggccgaatcttgtgcaaatcaagga
gcatacgagtgtgccagagctgtttacagtcatgctttaggagtgttcccaagtaagaaa
tcaatttggttacgcgctgcatacttcgagaagaatcacggcactcgtgaatccttggag
tcattattacagcgagctgttgctcattgccctaaatccgaagtattatggttgatggga
gcaaaatcaaagtggatggcaggagatgtgcctgcagccagaggcattctctctcttgct
tttcaagctaatcctaattcggaagaaatctggttggctgccgtcaaattagaatctgaa
aattcagaatatgaaagagcaaggcgtttgctagcaaaggcacgagcatctgcccccact
ccacgtgttatgatgaaatctgctaaactggaatggtaccttgaaaaatatgacctcgca
ttgaaattacttgcagacgccattcaagtttttcctgactttgcgaaattgtggttgatg
aaaggtcagattgaagaacaactgaaccgaccagatgacgctcatgcaacctacaatgaa
gcgttgaaaaaatgtgccacatcaattccagtctggttaatgcttgcacggttggctgaa
agaaggaaaatgctcactaaagctcgttcctaccttgaaaaaggtcgtctaagaaatcca
aacaatcctgaattgtggttagaagcgatcagaatagaatttcgagcaggtttacgtgat
atcgccaatactttgatggcaaaagctttgcaggaatgcccgaatgctggcatactgtgg
gcagaagccatattcttagagccacgtccgcaaagaaaaacgaaaagtgttgatgcactg
aaaaaatgcgaacacgacgcccatgttttattagcagtttccaaattgttctggtgtgaa
cgtaaaatcactaaatgtagggaatggttcaatcgtacagttaaaattgatcctgatctc
ggagatgcttgggcctacttctacaaatttgaacttctcaatgggactgaagagtctcag
caagatgtcaagaaacgatgcattgctgcagaacctcaccatggcgaacaatggtgtaaa
gtctcaaaactaatccaaaattggaaattaacaacagaatcaatcctacctcttgttgca
aaagaattacccattccaatttaa
DBGET
integrated database retrieval system