KEGG   Bemisia tabaci (sweet potato whitefly): 109034724
Entry
109034724         CDS       T06019                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1-like
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
btab  Bemisia tabaci (sweet potato whitefly)
Brite
KEGG Orthology (KO) [BR:btab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:btab03041]
    109034724
Spliceosome [BR:btab03041]
 Complex B
  Other components
   Complex B specific factors
    109034724
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_Prp19 WDR55 Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st EIF3I ANAPC4_WD40 WD40_Gbeta Beta-prop_EML Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th LisH_TPL Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_VPS8 Beta-prop_RIG_2nd Beta-prop_ACSF4 Beta-prop_Aladin WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_SPT8 Beta-prop_WDR41 Beta-prop_NUP159_NUP214 Beta-prop_Vps41 Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_Nup120_160 Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st Beta-prop_NWD2_C Beta-prop_IFT122_1st Beta-prop_EIPR1 Ge1_WD40 Beta-prop_WDR19_1st Beta-prop_IP5PC_F WD40_RFWD3 Beta-prop_SCAP Beta-prop_BBS7 Beta-prop_DCAF12 PROPPIN VPS8_N Beta-prop_RIG_1st WDR54 LisH_PAC1 Beta-prop_WDR75_2nd Dimer_MINDY4_N LisH_WDR26
Other DBs
NCBI-GeneID: 109034724
NCBI-ProteinID: XP_018903553
UniProt: A0A9P0F9P4
LinkDB
Position
Unknown
AA seq 510 aa
MSIEIESADVIRLIQQYLKESNLTKTLQVLQEETGVTLNTVESVDGFVTDINNGHWDVVL
KAVQSLKLPDHKLIDLYEQVVIELIELRELGAARTLLRQTDPMIVMKQQEADRYIHLENL
LARSYFDPREAYPEGKTKEKRRAAIAQALSGEVSVVPSSRLLALLGQAVKWQQLQGLLPP
GTTIDLFRGKAAIRDQEEEKYPTQLSKQIKFGQKSHVECARFSPDGQYLVSGAVDGIIEV
WNFTTGKIRKDLKYQAQDNFMMMEKAVLCLSFSRDSEMLVGGSEDGQIKVWKIATGQVLR
KFEKAHTKGVTCLQFSRDNSQVLSASFDATVRIHGLKSGKTLKEFRGHTSFVNEVTFTID
GHNILSASSDGTVKVWSVKSTECINTFKSLGTAGATVNSVHILPKNNDHFVVCNRTNIVV
IMNMQGQIVRSFSSGKREGGDFVCATLSPRGEWIYCVGEDYVLYCFSITSGKLERTLNVH
EKDVIGVAHHPHQNLLCTYSEDGLLRIWKP
NT seq 1533 nt   +upstreamnt  +downstreamnt
atgtcaatagaaattgaatcagcggatgtgatccgtctcattcaacagtacctaaaggaa
tcaaatctaacgaaaacattacaagttcttcaggaggaaactggggtgacactgaacaca
gtggaaagcgttgatgggtttgtcacagacatcaacaatggacattgggatgtagttctg
aaagcagtccagtctcttaaacttcctgatcacaagttgatagatctttatgagcaagta
gtcatagaactcattgagttgcgtgaacttggagcagctaggacattacttcgtcaaact
gatccaatgattgtcatgaaacaacaggaggctgatcgatatattcacttagaaaatcta
cttgctcgttcctactttgaccctcgagaagcgtatccagaaggcaaaacgaaggaaaaa
agaagagccgcaatagcacaagccttgtctggtgaggtctcagtggtgccatcgtcaaga
ctgttagccctcttaggtcaagctgtgaaatggcagcaactccaagggctacttcctcca
ggtaccaccattgatcttttccgtggtaaagctgcaatcagggatcaggaagaagaaaaa
tatcccactcagttgtcaaaacagatcaagtttggtcagaaatctcatgttgagtgtgcc
cgattctcgccagacggtcaatatctagtctctggtgccgtggatggtatcattgaggtt
tggaattttacaacaggaaaaattagaaaagatctcaagtatcaggctcaggataacttt
atgatgatggaaaaggcagttctctgtctctcatttagccgagattcagaaatgttggtc
ggtggctcagaagatggtcaaatcaaagtttggaaaattgccacgggacaagttttacga
aagtttgaaaaagctcacacaaaaggagttacttgtttacagttctcccgcgacaacagt
caagtattgtctgcatcttttgatgcaacagtcagaatccatggtttgaaatctgggaaa
acactgaaagaattccgtgggcatacttcctttgtaaatgaagtaactttcaccatcgat
ggacacaacattctaagtgcatcaagtgatgggacagtcaaggtgtggtctgtgaaatca
acagaatgtataaatactttcaaatcactgggaacagctggtgctactgtcaatagtgtt
cacattcttcctaaaaataacgatcactttgttgtttgtaataggaccaatatcgtagtc
atcatgaacatgcaaggacagattgtgagatcgttttccagtggtaagcgagaaggagga
gacttcgtttgtgcaactctttcgcctcgaggagagtggatttattgtgtcggagaagat
tatgtcctgtattgtttctcaatcacatctgggaaattggagcgaacactgaatgttcat
gagaaagacgtgatcggagttgctcatcatccccaccagaatttactctgcacatattct
gaagacgggcttcttcgtatctggaagccttaa

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