Bemisia tabaci (sweet potato whitefly): 109035775
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Entry
109035775 CDS
T06019
Name
(RefSeq) collagen alpha-5(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
btab
Bemisia tabaci (sweet potato whitefly)
Pathway
btab04382
Cornified envelope formation
btab04512
ECM-receptor interaction
btab04518
Integrin signaling
btab04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
btab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109035775
04518 Integrin signaling
109035775
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109035775
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
109035775
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
btab04147
]
109035775
00536 Glycosaminoglycan binding proteins [BR:
btab00536
]
109035775
Exosome [BR:
btab04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
109035775
Glycosaminoglycan binding proteins [BR:
btab00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109035775
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
109035775
NCBI-ProteinID:
XP_018905068
LinkDB
All DBs
Position
Unknown
AA seq
1773 aa
AA seq
DB search
MPFFCSILVCLLLVSLVTDSHQAVCKGCTNPHKCDCDGIKGESGDVGETGFQGLEGSPGP
PGPDGPAGPIGRKGEMGDIGDPGHRGYRGDEGFKGQRGPAGLPGFPGPAGLPGPRGLDGC
NGTDGRPGEYGPPGVIGPRGLSGKDGAPGMRGDPGEGGSNSKGTKGDRGDSGFHGKQGEP
GQPGLPGPMGYAGEPGMQGIAGEPGAPGPKGDVGDFREGLPGMKGEDGDDGERGPPGPIE
KPDGAEFTNVPSPLTFKGPKGPKGQRGSSGIPGRPGILGEKGPQGLFGYAGLRGLKGEQG
IEGPRGKQGHDGLPGPGGMKGEKGSPGLAGADGIDGLKGEPGDAGTDGIPGQQGPEGPPG
IYDPFLDIDGQEGNEGPQGPLGSPGEPGQYGIPGRPGPMGIRGPPGEPGPPGVAGQRGLK
GLSIKGERGIDGLPGGSGPIGEPGVPGSEGLSGERGLPGLTIIGPPGEDGRAGLDGFKGP
RGDRGDTGFKGPKGVPGIGINIRGPPGEPGLPGFPGTPGQPGKKGLPGIDGLNGVRGEDC
GVCPPGLPGLKGFPGDDGRNGEPGNPGMPGLPGPRGLKGVPGKVGRPGARGIDGRPGIPG
LPGVQGPKGVKGEIIGSLSQIKAEQGRPGPEGPKGQRGLSGFPGKEGPPGATGLPGRRGE
KGVHGDQGNPGVDGLRAPDGLPGSKGDSAPVPKEFLQGDPGDAGLPGIKGEEGDMGAPGE
PGEASEFQANFKGEKGPKGEIGDIGYTGYKGAKGVTGDTGAPGLPGPAGPPGFTLPGGPG
LKGFAGETGDQGPRGDPGSTGQPGPPGPPGSQGLKGDRGDPGQNLLGGDIGPTGVKGAKG
EPGAEGPEGLRGSPGYPGVGGVRGAKGAPGYAGLSGVLGVKGPIGDVRVGPPGRPGAPGL
PGLPGTIGAIGPTGTDGYPGSPGTKGLKGDRGILGARGLLGDQGLAGLPGRQGRYGLPGA
PGPDGDEGEDGDPGVKGEPGRPGLPGAAGNKGPRGDYGPPGSEGPEGAEGPKGETGDVGF
QGPSGLPGDANFSGPQGDPGDEGLSGPIGYPGAPGMEGKPGPSGDDALSFDGEPGLRGEP
GTPGVHGRWGIPGGKGLPGDFGLPGVKGFMGEKGPKGFAGEAGRSGLIGLDGMRGRTGPP
GPRGPNGETGMEGDPGEIGRPGPPGDTGHVGASGPPGPMGPKGTQGERGVPGFAPAVKGE
IGEPGHVGLKGQPGFPGLPGLPGLIGPKGMRGDYGLQGEAGEPGPPGSIGLIGDNGPPGE
PGFPGIGAERGEPGRDGMDGRPGRPGRPGQKGAPGEYGPDGDPGPQGPRGYSLKGVKGRP
GAPGPSIPGQPGIPGAPGMDGRRGNVGPKGLRGEPGFSRFSPKGERGDVGLTGLFGPPGP
QGDRGDTGYRGENGIHGKRGERGPSGEIGRAGLMGIPGRKGEKGERGDIPSIRNLTLIIG
PRGFRGDTGSAGSQGAPGAQGLPGIDGLPGFDGDRGYPGRNGQMGLIGEKGIAGDDGLPG
LTGLPGSRGRAGEPGLPAPRGRPPPNRGFYFTYHSQTDMIPNCPKHTVKMWDGYSLLHFM
GNARAHGQDLGAPGSCLQKFSVMPFLFCNLNDVCDYASRSDYSYWLSTPEPMPMMMTPIP
ASDVQKYISRCAVCEAPTRVIAIHSQTQTIPSCPTNWEELWIGFSFIMHTDANAEGGGQS
LVSPGSCLEEFRATPFIECHGHGNCNSFTSAFSYWLSTIDDREMFRKPSQQTLKAEALKT
RISRCTVCIRRTMSSPKKVEAFTSYRANNRRFG
NT seq
5322 nt
NT seq
+upstream
nt +downstream
nt
atgccttttttttgcagtattttagtttgtctcctcctcgtcagcctcgtcacggattct
catcaagccgtatgtaaaggttgtacaaatccccacaaatgtgactgtgatgggatcaaa
ggagagtctggagatgtgggagagactggttttcaaggcctcgagggttctccaggaccg
cctggtccagacggtcctgccgggcctattgggcgcaaaggagaaatgggtgacattggt
gaccccggacatcgaggttacaggggcgatgaggggtttaaaggtcaaagaggtcctgca
ggtttaccgggttttcctggtcctgcaggtttaccgggacccagaggattagatggttgc
aatggaacagatggaagaccgggagagtatgggccacctggagtgattggtcctcgaggt
ttatctggtaaagatggtgcgccgggcatgcgaggtgatcctggcgagggtggaagtaac
agtaaaggcactaagggtgacagaggtgatagcggtttccatggaaaacagggtgagcca
ggacagcctggcctcccagggccaatgggatatgccggagaaccaggaatgcagggaatt
gcaggagaaccaggcgcaccaggtcctaaaggggatgttggcgacttcagagagggcctc
ccaggaatgaaaggagaggatggagatgacggagagagaggcccacccggaccgatcgag
aagcctgatggcgcagagtttaccaatgttccaagtccactgacctttaaaggacccaaa
ggtccgaaaggacagcgcggttccagtgggattccgggccgtccaggaattttaggagaa
aaaggaccccagggtttatttggatacgcaggactcagaggtctgaaaggagagcaagga
attgaaggtccacgaggaaaacaaggtcatgatggtctaccaggacccggaggtatgaaa
ggggagaaaggctcgccaggtttagccggagcggatggaatagacggtctgaaaggagaa
cctggcgatgcgggaactgatggcatccctggacagcaaggtccagaaggacctcccggc
atttacgacccgttcttagacatcgatggtcaagaagggaatgaggggccccaaggacca
ctgggttcacccggtgaaccaggacaatacggaattcctggacgtcctggaccaatgggg
atcagagggcctccaggtgaaccaggacccccaggtgtggccggacaacgagggttgaaa
ggtctatcaattaaaggagaaaggggaattgacggtttacctggtggttctggccccatc
ggagaaccaggagtaccaggttcagaagggttatctggtgaaagaggacttcctggtttg
acaataataggacctcccggagaggacggtcgagctggcttggatggattcaaaggtcct
cgtggagatcgaggagatacaggttttaaaggtcctaaaggtgtgccaggtattggaata
aacattcgcggaccacccggtgagcccggattgcctggatttcccggtacgcctggtcag
ccagggaaaaaaggactgcctggaattgatggactaaacggtgtaagaggagaagattgc
ggagtgtgcccaccaggtttacccggattgaaaggatttccaggagatgatggtcgtaat
ggggaaccaggtaatcctggaatgcctggccttcctggaccccgaggtctcaaaggtgtt
cccggaaaagttggtagacctggtgctcgtggaatcgatggtagacctggtattcccggt
ttgcctggagtgcaaggccccaaaggagtgaaaggagaaataattggatctttaagtcaa
atcaaagcagaacaaggtcgtccaggtccggaaggtccgaaaggtcaaagaggattaagt
ggatttcctggaaaagaagggccacccggcgccacaggattacctggtcgtaggggagag
aaaggtgtccatggagaccaaggaaatcctggcgtagacggattgcgagcccctgatggt
ttgccagggtcaaaaggagactccgcccccgtcccaaaggaatttttgcaaggagaccca
ggtgatgcaggactgccaggaataaaaggagaggaaggcgatatgggagcccctggggag
ccaggcgaagccagtgaatttcaagcaaatttcaaaggagaaaaagggccaaagggagaa
ataggagacataggatacacgggatacaaaggggcgaaaggcgtcaccggagatacaggt
gctccagggttgccaggaccagcaggaccccccggtttcacattgccaggtggacctggc
ttgaaaggctttgctggagagacaggggaccaagggccaaggggagacccaggctcaact
ggtcaacctggacctccaggacctcctgggtcgcaaggattgaaaggagatcgaggtgat
ccaggtcaaaacctgcttggaggagatattggtcctactggtgtgaaaggcgccaaagga
gaaccaggagcagaagggccagagggtctcagaggatcacccggttacccaggagtggga
ggcgtcagaggagccaaaggtgctcccggttatgctggtttaagtggggttttgggtgtg
aaaggacccatcggtgatgttcgagtaggacctccaggaagacctggagcgccaggttta
cctggattgccaggaactattggagccattggaccgacaggaactgatggttacccaggc
agtccaggaaccaaaggtcttaaaggagatcgtggaattcttggtgctcgaggtcttctg
ggtgatcaaggattggcaggacttcctgggagacaaggaagatatggtttgccaggagct
cctggtccagatggtgatgaaggagaagacggagatcctggtgtgaagggtgaaccagga
aggcctgggcttccaggagcagcaggtaataaaggacccaggggcgattacggtcctcca
ggttctgaagggccggagggagctgaaggcccaaagggtgaaacgggtgatgttggtttc
caaggtccgtcaggtctaccaggagatgctaacttcagcggacctcagggtgaccctgga
gatgaaggtctctcaggcccaattggttatcccggtgcgccagggatggagggcaaacca
gggccatccggtgatgatgctttatcatttgatggtgagccaggactaagaggagaacct
ggaactccaggagttcatggccgctggggaatacccggtggtaagggacttccgggagat
ttcggtttaccaggtgtgaaaggattcatgggagagaagggaccgaaaggctttgcggga
gaagcaggtagaagcggattgattggtctagacgggatgagaggacgaacaggcccacct
ggtccacgtggaccaaatggtgaaacaggaatggaaggagatcctggtgaaattggaaga
ccaggtcctcctggtgatacaggacacgtaggtgcaagcgggcctcccggaccaatgggc
cctaaaggaacgcagggagaaagaggcgttccgggcttcgctcccgccgtgaaaggagaa
attggtgagccagggcatgttggattaaaagggcaacctggcttccctggtcttccagga
cttcccggcctaattggtcctaagggcatgagaggtgattatgggctacaaggagaggca
ggagagcctggacctccaggttcaattgggctcattggagataatggtcctcccggagaa
cctggattcccgggtattggagctgaacgaggagaaccagggcgagatggtatggatggg
agacctggacgacctggaagaccaggacaaaaaggagcgcctggagaatatgggccagat
ggggaccctggtcctcaaggacccagaggctattctcttaaaggcgtcaaaggaagacca
ggagctccaggtccatcgattccaggccagccaggtattccgggagcccccggtatggat
ggacggaggggaaatgttggtcccaaggggttgagaggagaaccaggattttcacgattt
agtccaaaaggcgaacgaggtgacgttggtctcacagggctttttggaccaccaggacca
cagggtgatcgaggtgacactggctatcggggagaaaacggtattcatggcaagagaggt
gaacgtggaccatctggagaaattggtagagctggccttatgggaatcccaggacgcaag
ggtgaaaaaggtgaaagaggagacataccatcgatacgcaatctaactttaattattgga
cctcgcggtttccgcggtgacacgggatctgcaggctcacaaggagctccgggagcccaa
ggattaccgggcattgatggtttacctggttttgatggtgacagaggttacccaggccgc
aatggacagatgggccttatcggagagaaaggaatagctggagatgatggattacctgga
ttaactggtctcccaggttcaagaggtagggcaggagagcctggtctcccggctccaaga
ggacggccccctcctaatagaggtttctacttcacgtatcactcccagacagatatgata
ccaaattgtcctaagcacaccgtgaaaatgtgggacggttattcattgttacatttcatg
ggcaatgcccgcgctcatggtcaagacttaggtgctcctggcagttgcttgcagaaattc
tctgtcatgccatttttgttctgtaatttgaacgatgtgtgtgattatgcgagtagaagt
gattacagttactggcttagtacaccagaacctatgcctatgatgatgactccaatacca
gcatctgatgttcagaaatacatatcacgatgcgctgtttgcgaagctcctaccagagtg
atagctattcacagtcaaacgcagaccattccaagctgtccaaccaattgggaagagcta
tggatcggttttagtttcattatgcacaccgatgcaaatgcggagggtggtggtcagtca
ctcgttagtcctggatcttgcttagaggaattccgagcaacgccattcatcgaatgtcat
ggacacgggaactgcaattccttcacgtcagcattctcctactggttgtcaacaatagat
gaccgcgaaatgttcagaaaaccgtcacagcaaacgctaaaggctgaagctcttaaaaca
agaattagtcgatgcactgtgtgtatcagaagaacaatgtcatcgccaaagaaagttgaa
gcgtttacatcctatcgtgccaataatagacgtttcggttga
DBGET
integrated database retrieval system
