Bemisia tabaci (sweet potato whitefly): 109035898
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Entry
109035898 CDS
T06019
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
btab
Bemisia tabaci (sweet potato whitefly)
Pathway
btab03013
Nucleocytoplasmic transport
btab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
btab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109035898
03015 mRNA surveillance pathway
109035898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btab03019
]
109035898
Messenger RNA biogenesis [BR:
btab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
109035898
mRNA cycle factors
P-body specific factors
109035898
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
109035898
NCBI-ProteinID:
XP_018905261
UniProt:
A0A9P0A6R7
LinkDB
All DBs
Position
Unknown
AA seq
1472 aa
AA seq
DB search
MESDKKSIGTEESPQVADAGEGAICQESSKTESEVDSTVKEEPPKIESGENTVEDTSTFK
SDKTSVDCIDTLKNESDDQKVECQETPPEICRVDSSNIQEFCRDELENKEIDNNINSNAT
SDHKNEVGEETQENQCDEMLADGEETSKNGSSDATVESLNPPESEIDVKLMGNNKSLVNE
SSEKLEGNKETLHQNLNDKIIENQKTPKNKSLEKVSKDETPQSGSDGKMKDSKKTVKSQC
NGKTPHKCVSSDSSSTNVLAEFIQRFELSNSSKKSISKTEVEDTITDSGRSTSTGCSKSP
SMVKTLPSLNNDPIKSQESKADCKSERPQTEGLKNSEDCPAVSVEQAEKNEVLTFITETK
QRIQAKLEIRMRNKNAIRLDEQSLAKLDSSLKKNTAFVKKVRNFTAAQLGSLLKEMQTLN
LSKYLSEIAAALIETKLKMSDISAAVLLCTEINCRYAEFGKCMLECWQKTLAQKRDEKVV
NLSKFRVDLRFYADLISSGVFSCKEALPLLGNVLTVLTTSSREDSSHISIILSFCKYCGE
DYAGLVPRRVHLLAEKYSLEIPKSDLIPPEKQKTVRMLLKDYHANLQKHLLKEHSEFQRI
ECQNQKILQTKGELSNEKKEKSEMLNSNLQKLLVSVSSLAELVDEEAVVLPENKQTTTES
TCMVAPVNKTDGVFKCSSIWEDEETQKFYEDYPDITGLVPASQKKLRESSKSETEVPEPK
LDDIKIEDESDDLKLDEKKEEDSEDTEPISTNFKVLVDSLITGLTTCVNREMVDRIAAEF
VLQLGVPNKHVRRKIVKTLFMVPRTRLDLLPLYARFVAVLNHIAPEITADLTYQLKQEFK
YHVRKKDQINIESKVKTVRFIGELVKFGLYPKEEGLYCIKVLVHDFTHHNIEMACNLLET
CGRFFFRCPETHQRTKVYLEQMMRKKSAMSLDARYKNMVENVYFFVNPPDNPIKRKRRPP
LQEYIKQLIYQDLSLKTEEFVLEQLRKLPWDNREIAQYAILCLASAWKVKYLNIRCLANL
IAGLVDYQEFIGTEVVDNVLEDIRIGLELNLPKLNQRRLAMIKYLGELYNYRLLESSDVF
KVLYSLISFGVSFDPKIISPLDPPENLFRIKLVCILLETCGQFFNHGMPKTKLDYFFIFF
QNYYWHKYSHPIWTEQSKFPVNLTYMFEDTLLNLRPNFKMASSLEEAIEASQTLQTKLMS
KLPPSLLQISNNSKSGLGTIVETGENSGNESVDEDGDSDNEDGPPVRYEYEEHAPSSECI
TVEQSLNGHEETINPSEDPDDDEDEEEEDVVDDDYDYDSDSEEMKDFNQEPEDADFLSAF
EQMVSDNLQDRMNEVVKPPKVDIAIPLHFKSSTKKTYEQLMQNEEKDENTVNFVLMLRKG
SKSQCKTLNVPGNSELAVKLKSQEKAERIEMERVKQLTLNINNRLEEEDYQDQVLQNSRS
SVSNFNRDRKQRYQHPKGAPDADAIFGRKKFR
NT seq
4419 nt
NT seq
+upstream
nt +downstream
nt
atggagtctgataaaaagtcaattggtaccgaagaaagtcctcaggttgcagatgctgga
gaaggtgctatctgccaggaaagttccaaaactgagagtgaagtagattcgacagtcaaa
gaagaacctccgaagattgaatctggcgaaaacactgttgaagatacctctacatttaaa
tctgataaaacaagtgttgattgcatagatactcttaaaaatgaaagtgatgatcagaaa
gtagagtgtcaagaaacacctccagaaatatgtagagtggattcatcaaacattcaagaa
ttctgcagggatgagcttgaaaataaagagattgacaacaatataaatagtaatgctacg
tcagaccacaagaatgaagttggcgaagaaactcaggaaaaccaatgtgatgagatgctc
gcggacggcgaagaaacttcaaaaaatgggtcatctgacgcaactgtagagtctctaaat
cctcctgagagcgagattgatgtgaagttaatgggcaacaataaaagtcttgtgaacgag
tcgagtgaaaagctggaaggcaacaaagaaactctacaccaaaatttaaatgacaaaata
atagaaaaccagaaaactccaaagaataagtctctcgaaaaagtcagcaaggacgaaact
cctcaaagtggatcagatggaaaaatgaaggatagcaaaaaaactgtaaagagtcagtgc
aatggaaagacccctcacaaatgtgtctcaagtgattcatcttctaccaatgtccttgct
gaattcattcaacgctttgagctttccaattccagtaaaaagtcaatttccaaaactgaa
gtagaggatacaataacagactctggaaggagtacatccactggatgctccaaatcacct
agcatggttaaaacacttccaagtttaaacaatgatccaatcaaaagtcaagagtcaaaa
gcagattgcaaaagtgagagacctcaaacagaaggtcttaaaaatagtgaagattgccct
gctgtctccgttgaacaggcagaaaagaatgaagttttaacgttcattacagagacaaag
caacgcatacaggcaaagttagaaatcagaatgcgaaataaaaatgcaattcggctggat
gagcagtccctggcaaagttggattccagccttaaaaagaatacagcctttgtgaagaaa
gtgcgaaatttcacagccgctcaattaggcagcctgctgaaggaaatgcaaactctcaat
ttgtctaaatatttgagtgaaatagcagcagctctcattgagacgaaattaaaaatgagt
gatatttcagcagctgttctgctttgcacagaaatcaattgtaggtatgctgaatttggg
aaatgtatgcttgagtgctggcagaaaactttagctcagaagcgcgacgaaaaagtagtg
aatctgagtaaatttcgagtggatcttcgtttttatgcggacctaatctcctctggtgta
ttctcttgcaaagaagctctgcctctcctcggtaatgttctcacggtcctaacaacatca
agccgtgaagattctagtcacataagtattatcttaagtttttgcaagtactgcggagaa
gattatgcaggcttagtaccacgtcgagtccacctgcttgcagaaaagtacagtttagaa
atccctaaaagtgacttaatccctccagaaaagcaaaaaacagtgcgtatgctcctaaaa
gactaccatgcaaatcttcagaagcatttattaaaagagcactccgagttccaaagaatt
gaatgccaaaatcaaaagattcttcaaacaaaaggggaattgagcaacgagaaaaaggag
aagagtgaaatgctgaacagcaatctgcagaaacttctcgtttctgtgtcaagtcttgca
gagcttgtggatgaagaagctgttgtgctccccgaaaataagcaaacaactacagagagc
acttgtatggtggcccctgtcaataaaacagatggagtttttaaatgctcaagcatttgg
gaagatgaagaaacgcagaaattttatgaagattatccagacattacagggcttgttcct
gcctcccagaaaaaactacgagagtcatcaaaatcagaaacagaagtccctgaaccaaaa
ctagatgatatcaaaatagaagatgaaagtgatgatctgaaattagatgagaagaaagag
gaggattctgaagacacagaaccaatcagcacaaattttaaggtccttgttgatagtcta
atcactggactgacaacttgcgttaacagagaaatggtggatcgaattgctgcagaattt
gttttgcagttaggtgtaccgaacaagcatgttcgtcgcaagattgtgaaaactttattt
atggtgcctcggacacgactggacttgttgcccctatatgcacgttttgtagctgtctta
aatcatatagccccagaaattacagcagacctcacctatcaactaaaacaagaattcaag
taccatgttcggaagaaggaccaaattaacatagaatccaaagtgaaaacagtgagattt
attggagagcttgtaaaatttggactttatccgaaagaagaaggattgtattgtatcaaa
gttcttgttcatgactttactcatcacaatattgagatggcttgtaatctcctagaaact
tgtggccgcttctttttccgttgtccagaaactcatcaaagaactaaagtatacctggag
caaatgatgcggaagaaatctgctatgtctttagatgcccgttacaagaacatggttgaa
aatgtctacttctttgtcaatccgccagataatccaattaaaaggaaaaggagaccacca
ctgcaagaatacataaaacagttgatttatcaggatttaagccttaagacagaggagttt
gtcctggagcaactgaggaagttaccttgggataatcgagaaattgcccaatatgctatt
ctgtgccttgcaagtgcttggaaagtcaagtatcttaatattcgttgcctagcaaatctg
atcgctggattagtcgattatcaagaattcataggaactgaagttgtggataatgtttta
gaggatataagaataggcttggagttgaatctaccaaagctgaatcaacgcagattagcc
atgataaaatatttaggtgaactgtacaattatcgtctattagaaagctcagacgttttc
aaggttctgtattcattgatctcatttggagtatcgtttgatcccaaaatcatctctcca
cttgatcctcctgaaaatttattccgcatcaaattagtatgtattctactggaaacttgc
gggcagtttttcaatcatggtatgccaaagactaaactggattatttcttcatttttttc
cagaattactattggcacaaatactctcaccctatttggaccgagcagagcaaatttcca
gtaaatctaacctacatgttcgaagacactcttctcaatctccgtccaaattttaaaatg
gcctccagccttgaagaggctattgaagcttcacaaacactccagactaaactcatgtcc
aaactacctccatcattattgcagatttccaacaacagcaagtcaggtcttggcactatt
gtggaaacaggtgaaaacagtggtaatgagtctgtggatgaagatggagattcagacaat
gaagatggcccaccagttcgatatgagtatgaagagcacgctccaagttcagaatgcata
actgttgagcaatctttgaacgggcatgaagaaaccataaatccgagtgaggacccggat
gatgatgaagatgaggaagaggaggatgtcgttgatgatgattatgattacgactcagac
agcgaagaaatgaaagactttaatcaggagccagaggatgcagactttttaagtgcattt
gagcaaatggtatccgacaatcttcaagatcgtatgaacgaggttgtgaagccgcctaaa
gttgacatagccatcccgctacatttcaagtcaagtacaaagaaaacttatgagcaattg
atgcaaaatgaggaaaaggatgaaaacaccgtcaattttgtactcatgctccggaaagga
tccaagtctcagtgcaaaaccttaaatgttcctggaaattcagagctagctgtcaaactg
aaatcccaagagaaagcagagagaatagaaatggaaagagtaaaacagcttacactaaat
atcaataatagattagaggaagaggattaccaagatcaagtgctgcagaactcacgatct
tcagttagcaactttaatagagatagaaaacaaagataccaacaccccaagggtgcgcca
gacgctgatgccatttttggtcgaaagaaatttcggtga
DBGET
integrated database retrieval system
