Bemisia tabaci (sweet potato whitefly): 109036600
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Entry
109036600 CDS
T06019
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
btab
Bemisia tabaci (sweet potato whitefly)
Brite
KEGG Orthology (KO) [BR:
btab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
btab03021
]
109036600
03036 Chromosome and associated proteins [BR:
btab03036
]
109036600
Transcription machinery [BR:
btab03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
109036600
Chromosome and associated proteins [BR:
btab03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
109036600
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
SH2
S1
HHH_9
HHH_3
Tex_central_region
Spt6_S1
Tex_YqgF
DUF2924
S1_RRP5
Tex_N
OB_RRP5_4th
Motif
Other DBs
NCBI-GeneID:
109036600
NCBI-ProteinID:
XP_018906472
LinkDB
All DBs
Position
Unknown
AA seq
1752 aa
AA seq
DB search
MADFIDSEAEESSDEEELDEVDRKRAKKLKQVDSDEEEEDDEEVLKDLIDDAPIEEDESD
GEESDGSGSKKRKKSDQEDDYDDRLEDDDYDLLEENLGHKISRKKRFKRLRRIEDDESGD
EKGREDEEKDGEDLYDSERELDEREEERGSERGEDEDGEGDYSDADDFIVDDEGRPIASR
KKKKPIFADAALQEAQDIFGVDFDFDEFDRYGDEYDEEEEEEEEEDDEYIDEEAGEDVDR
PRKTRKKTARKATRKSIFELYEPIELKRGHFTDFDNEVRNTDIPERMQLREFPIVSVPEG
SDELDDESEWIYKQAFCKPTISTQENPGGVDPRDKSRKGPQTIGKIKKALDFIRNQHFEV
PFIAFYRKEYVQPELTINDLWRVYKFDAKWCQLKARKSALQKLFENMQEFQSQELMKESL
DAPIPENVRLISDEDIDRLKAVQTTEELKDVHSHFLLHYSNEIPLMLEKERQKKKEAAKQ
KQQDRPKKKKMVTDDDGNEVEVEVTDDEAEPETQPEEEDEEPELVKPAVRQGPYSLCRKA
GIGGFVKRFGLLPEQFAENLRDNYQRNEVEQEPVGPLVLAKEYTSSRFTSPEDVVLAAKY
MLAMQISKEPLVKSCVRETFFERAKIDVRPTKKGMKEIDENHSCYAMKYLKGKPVRDLTG
EQFMKLQIAEQDKLVNIIINEHIEGITHNSSYVEEVKQLFYRDEFSKHVQEWNKLRLEAV
EIALSKMLFPDLCKELRTNLLGESKESVLKNCCDKLYNWLKVAPFSVDFDEDDEEWDTSK
GLRIMSIAYEPDLSQAAFGCVISPEGEVIEHIRLPHLLKRKQSFRVDDKALKEADLRALR
DFISTKKPHAICVGGESREALMIVADVKEIITNLVEDEQFPMIPVEIVDNELSKIYANSN
KGISDFREYPLLLRQAVSLARRLQDPLIEFSQLCTSDDEILCLRYHALQDQLSKEELLDA
LTIEFVNRTNEVGVDINETVQQVYASNLVQFVCGLGPRKAAALLKLLKQTNQRLENRTQL
VTSCHMGPKVFINCAGFIKIDTNSLGDSTDSYVEVLDGSRVHPETYEWARKMAVDALEYE
DDDANPAGALEEILEAPERLKDLDLDAFAEELERQGFGNKSITLYDIRAELNHRYKDLRT
PYRSPNPEELFDILTKETPETFYIGKMISAVVSGISRKQPTPEQLDKANPIRNEETGLWQ
CPLCFKNDFPELSEVWYHFSTSKGCPGSATGVKIRLDNGVSGFIHIKNLSDKHVTDPEER
VQRNQVIHCRIIKIDVERFSIDATSKSSDLLDKNHEWRPPKDPFYDLEAEMKDKKTEDDA
KQQKKRQTYIKRVIVHPSFHNISYKEAEALMASMEPGEVIVRPSSQGADHLTVTWKVADG
ICQHIDVKEVGKENAFSLGQTLLIGNEEFEDLDEIIARHINPMAAYCRDIFSFRYYRNTD
GGLKDKAEEIIKEERKKNPSKIHYIISVSKNYPGKFLLSYLPRTRCKHEYVTVTAEGYRY
RGQMFDSISTLFRWFKEHFRDAIPGTPSTPRSVNMRSTPFQPHTPNMLNMSVDMQRVPPP
MGLMHTPHYPQTPAAYAAAAMSAYPNTPYTPSAATPHFMTPYHTTQTPRYGGHQTPSHQS
MGPFIHPAPVAPSPHRQPRNSQPSSSAAPDDWRKLAEDWVRSNKKDGSSTPRSNPRQSPR
YEDSSFRLGRSTPSSRQMGPRSYPDLFSNKSPGGRSGYATPHSGRSTPRTVASPRSMIES
SLGDATPLYDEN
NT seq
5259 nt
NT seq
+upstream
nt +downstream
nt
atggcggatttcattgattcggaggcagaggaaagcagtgatgaggaggagttagatgag
gtggaccgaaagagggccaaaaagcttaaacaagtggattcagatgaagaagaagaagac
gatgaagaagtgttgaaagatctaattgatgatgcaccaatagaagaagatgaaagtgat
ggtgaagaatcagatggatctggatcgaaaaagcgtaagaagtcagatcaagaagatgac
tatgatgaccgactggaagacgacgactatgatctactggaagaaaatcttggacacaaa
atatccaggaagaaacgtttcaagcgattgcgtcgaatagaggatgacgagtcaggagat
gaaaaaggccgagaagatgaagaaaaggatggtgaagacctctacgactcggaacgggag
cttgatgagagggaggaagaacgtggatcagaacgaggggaagatgaagatggtgaagga
gactactcagatgcagatgatttcattgtggacgatgaaggtcgcccaatagccagccgt
aaaaagaagaagccaattttcgcagatgctgccctccaagaagcccaagacatatttggg
gtggatttcgacttcgatgagtttgacagatatggcgatgaatacgatgaagaagaagag
gaagaagaggaggaagatgatgagtatatagatgaagaggctggtgaggatgtggacaga
cctcgaaaaacacgcaagaaaacagctcgcaaagcgacgcgcaagtccatctttgagttg
tatgagccaattgagctgaaacgagggcatttcactgactttgataatgaggtcagaaac
acagacattcctgaaagaatgcaacttcgtgagtttcctatcgtctctgtgccagagggc
tctgatgaactagatgatgagtcggaatggatctacaaacaagcattctgtaaaccaaca
atatctacacaggagaaccctggtggagttgatccgcgagacaaatccagaaaagggcca
caaacaatcggaaagatcaagaaagctcttgattttattagaaatcagcactttgaggtt
ccctttattgccttctaccggaaagaatatgtgcaaccagaactgacgataaatgacttg
tggcgagtatacaagtttgatgctaagtggtgtcaactgaaggctcgaaaaagtgctctg
cagaaactttttgagaacatgcaagaatttcagtcgcaagaattaatgaaagaaagcctc
gatgctcctattccagagaatgtacggctgatctcagatgaggacatagatcggctgaaa
gcagttcaaaccacggaggaattgaaggatgtacactcacacttcttgctacattactca
aatgaaattcccctaatgctagaaaaagaaagacagaagaagaaagaggctgcaaagcaa
aaacagcaagatagaccgaaaaagaagaagatggtgacagatgatgatggaaacgaagta
gaggttgaggtaactgatgatgaagcagagccagaaacccaaccagaagaagaagatgag
gaaccagagttggtcaaaccagctgttcggcagggtccttatagtctttgtcgcaaagct
ggaattggtggtttcgtgaaaaggtttggattattgccagaacagttcgctgagaacctg
cgagataattatcaacgtaatgaagtcgaacaagagcctgttggacctttggtgctagca
aaagaatacacttctagtcggttcacgtctcctgaagatgtagtgctagcagctaagtat
atgctcgccatgcagatttccaaagagccactagtcaaaagctgcgtgcgagaaaccttc
tttgagcgggcaaaaattgatgtgagaccaacaaaaaaaggaatgaaagagattgacgaa
aaccacagctgctacgccatgaaatacttaaagggaaaaccagtcagggatttaacggga
gagcagtttatgaaactccaaattgcagagcaagacaagcttgtgaacataataataaac
gaacacattgaaggtatcacgcacaattcatcctatgtggaggaggtgaagcaactcttc
tatcgtgatgagttcagtaaacatgtccaagaatggaacaagctcaggttggaggctgtt
gaaatagcactctccaaaatgctattccctgatctttgcaaagagcttcgcacaaactta
ttaggtgaatcgaaagaatctgtactgaaaaattgctgtgataaactctacaattggctg
aaggttgctccgttctccgtcgattttgatgaagacgatgaggagtgggacacgagcaaa
ggactccgcattatgagtatagcctatgagcccgatctctcccaagcagcatttggctgt
gtgatctccccagaaggtgaagttattgagcatataaggcttccacacttgttgaaacgt
aagcagtctttcagagtggatgataaagctctcaaagaggcagaccttcgtgccttacga
gacttcatttctacaaaaaaaccgcatgctatttgtgtgggcggcgagtctcgagaagct
ctcatgattgttgcggatgtaaaagagatcatcacaaatctagtagaggacgagcagttt
ccaatgatccccgttgaaatcgtcgacaatgaattatcaaagatctatgccaattcaaat
aaaggaattagtgattttcgagaatatcctctcctactacggcaagctgtttctcttgcc
aggcgcctgcaagatcccctcatagaattctctcaattatgtacatcagatgatgaaatt
ctatgccttcgatatcatgcattacaagaccagctaagcaaagaagagctcttggatgcc
ttgaccatcgagtttgtgaatcgaaccaacgaagtaggtgtggacatcaatgaaactgtg
cagcaagtttacgccagcaatctagttcaatttgtttgtgggttggggcctaggaaagct
gcagcattgttaaaattactaaaacaaacaaaccaacgactagaaaaccgaactcaactg
gtcacctcttgtcatatgggtcctaaagtatttatcaattgcgcaggtttcatcaaaatc
gataccaattcgcttggtgatagtacagattcgtatgtagaagttttggatggttctcga
gttcatccagaaacgtatgaatgggcccggaaaatggctgtagatgctctggagtacgaa
gatgatgatgcaaatccagctggtgctttagaagaaattcttgaagcaccagaaaggtta
aaagacttggacttagacgcatttgctgaggagttggagcgacaaggttttggcaacaag
agtattactctgtatgacatccgtgctgagttgaaccatcgttataaggatctgcgcaca
ccttaccggtcaccaaacccagaggagttatttgatattttgaccaaagagaccccagaa
acattctatattggaaaaatgatttcagcagtcgtttcaggaatctcaagaaaacagcca
acgcctgaacagcttgacaaagccaaccctattcgaaatgaagaaaccggcttgtggcaa
tgtcctctttgcttcaaaaatgatttcccggaattgtcagaagtatggtatcatttcagt
acttccaaaggctgtcctggatctgcaactggagtcaaaatcaggctagacaacggcgtc
tccggctttattcatattaaaaatctgtcagacaagcatgtcacggatcctgaagagagg
gtgcagcgaaatcaagtaatccattgtcggataataaaaatcgatgtggaaaggttttca
atagacgccacctccaaatcctcagacttacttgataagaatcatgagtggagacccccc
aaagaccctttctatgaccttgaagcggaaatgaaagataagaagactgaagatgatgcc
aagcaacaaaagaaacggcagacttatatcaaacgagtcatagtccatccctccttccac
aacatttcctataaagaagcagaagctctcatggcatcaatggagcctggtgaagtcatt
gtccggccatccagtcagggagctgaccatctcacggtaacgtggaaggtcgctgatggt
atttgtcaacatattgacgtcaaggaagtgggcaaggaaaatgctttttcacttgggcag
acattgctgattggtaacgaggagtttgaggaccttgatgaaatcattgcacgacatatc
aaccccatggctgcatactgccgggatattttttcatttaggtactaccgaaacacagat
ggaggtttgaaagataaagctgaagaaataattaaggaagaaagaaagaaaaacccatcc
aaaattcactacataatctctgtgagcaagaactaccccggaaaattcttattatcgtat
ctgccacgaactcgatgcaaacatgagtatgtaacagtgacagcagaaggatatcgttat
agaggacaaatgtttgacagcataagtaccttgttccgttggttcaaggaacatttcaga
gatgctattccaggaacaccaagcactccaagatctgtaaacatgagaagcacaccattc
cagcctcacacaccaaatatgctgaatatgagtgtagacatgcaaagggtaccaccccca
atgggtcttatgcatacccctcactatccgcagactccagcggcttatgcagctgcagct
atgtcggcgtatcccaacacaccttataccccaagtgcagcaacaccgcactttatgacg
ccataccacacgacccagacaccgaggtatggtggtcatcaaacgccctcccatcaaagt
atgggaccgtttatccaccctgcacctgttgctccatctccgcaccggcagcctcgtaat
agtcagccatcctcatcagcagctccggacgattggcgaaagctggctgaagactgggtc
cgctccaacaagaaagatggctcctcaactccgagatccaatccgaggcagagtccaaga
tatgaagattctagctttaggttgggtcgatccacgccatcctcaagacaaatgggtcca
aggagttatcctgatctgttctcgaacaaatctccgggtggacgctcaggctatgcaacc
cctcactcaggcagatcaacccccaggactgtagcaagtcctcgatcgatgatcgaaagt
tcgctgggtgatgcgacgcccctgtatgatgagaactga
DBGET
integrated database retrieval system
