Bemisia tabaci (sweet potato whitefly): 109036865
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Entry
109036865 CDS
T06019
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
btab
Bemisia tabaci (sweet potato whitefly)
Pathway
btab03020
RNA polymerase
btab03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
btab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109036865
09124 Replication and repair
03420 Nucleotide excision repair
109036865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
btab03021
]
109036865
03400 DNA repair and recombination proteins [BR:
btab03400
]
109036865
Enzymes [BR:
btab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
109036865
Transcription machinery [BR:
btab03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
109036865
DNA repair and recombination proteins [BR:
btab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
109036865
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
109036865
NCBI-ProteinID:
XP_018906819
UniProt:
E9RHL3
LinkDB
All DBs
Position
Unknown
AA seq
1176 aa
AA seq
DB search
MYDLEDDNYGDEDSGEISSELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DSPQIDLQAEAQHTSGEIETPPRYLLKFEQIYLSKPTHWEKDGSPSPMMPNEARLRNLTY
SAPLYVDITKTVIKDGQEPVVTEHEKSFIGKIPIMLRSTFCLLSGLTDRDLTELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAYKAEIRSCLEHSSRPTSTLWVNMM
ARGGQSIKKSAIGQRIIAILPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQNVALNFIGARGARPGVTKDKRIKYAREILQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYAQ
KFIDRGKDFNMELAIKTKIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGAAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPEQLMGTLRKLRRQMDIIVSE
VSIIRDIRDREIRIYTDAGRICRPLLIVENQTLLLKRSHVDNLKQRDYNNYKWQELVSSG
VVEYIDTLEEETTMIAMSPEDLRQDKEYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQS
PRNTYQSAMGKQAMGVYITNYHVRMDTLAHVLYYPHKPLVTTRSMEYLRFRELPAGINSI
VAILCYTGYNQEDSVILNASAVERGFFRSVFFRSYKDSESKRIGDQEEQFEKPNRSTCQG
MRNAIYDKLDDDGIIAPGLRVSGDDVVIGKTITLPENDDELEGTTKRYSKRDASTFLRNS
ETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCE
GLAPDIIINPHAIPSRMTIGHLIECLQGKVSSNKGEIGDATPFNDAVNVQKISTLLQEYG
YQLRGNEVMYNGHSGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRA
RDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRIHVCNYCGLIAIANLRNNTFECKG
CKNKTQISQVRLPYAAKLLFQELMAMNIAPRLMVVS
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgtatgatttagaagacgacaattatggagacgaagattcgggtgaaatcagtagcgaa
ttgtggcaagaagcctgctggattgtcatcaacgcttacttcgacgagaaaggtttggtg
cggcaacagcttgactccttcgatgaattcattcagatgtcagtccaacgtatcgtggaa
gattcgcctcagatcgatctccaagcagaagcccagcacacaagtggtgaaattgaaaca
ccacctcgctacttactaaaatttgaacagatttatctatcgaaaccgactcattgggaa
aaggatgggtcaccttcccctatgatgccaaatgaggctcggctgaggaatttgacttac
tctgcgccactctatgttgacatcactaaaactgtcatcaaagatggtcaagagcctgtc
gtcacagagcatgaaaaatctttcattggtaaaattccaattatgttgcgttctacgttt
tgtcttctgagcggtttgacagatcgtgatcttacagaattaaacgagtgccccttggat
cctggtggctattttattatcaacggctcagaaaaggtcctaatcgctcaagaaaagatg
gccaccaacactgtgtacgttttcagcatgaaagatggaaaatacgcgtataaggcggaa
atccggtcatgtttggagcactcttcacgtccgacttccacgctttgggtcaacatgatg
gcaagaggaggtcaaagtattaaaaaatcagcaatcggtcaacgtatcatcgccatcctc
ccctatattaagcaggagattccgatcatgatcgttttccgagctttaggttttgtggcc
gatcgagatatccttgaacacattatctacgacttcgatgacccagaaatgatggaaatg
gtaaaaccatcgttagacgaagccttcgtaattcaggagcagaacgttgcgctcaatttc
atcggagcccgtggagcgagacctggtgtgaccaaagacaagagaataaaatatgctagg
gaaattctgcagaaggaaatgttgcctcatgttggagtgtctgacttttgtgagacaaag
aaagcctacttccttggttacatggttcataggctgttgttggctgcacttggacgtcga
gagttggatgatcgtgatcactacgggaacaaacgtctagatcttgccggaccactgctt
gcatttttattcagaggattattcaagaacttaatgaaagaggtgagaatgtatgcacag
aaattcatcgaccggggaaaagacttcaacatggagctagcaatcaagacgaagataatc
acagatggactccgttattccttggccacaggaaattggggagatcagaagaaagctcat
caagcaagagctggtgtatcccaggtgttgaatcgactgacctttgcttcaaccctctca
catttgcggcgtgtcaactccccaattggtcgtgacggcaaactagccaagcctcgtcag
ttacacaacacactgtggggtatgatctgccctgccgaaacaccagagggtgctgctgtc
ggcctggtaaagaaccttgcccttatggcctatatctcagtcggatctcagccgagtcct
atcctagagtttttggaagagtggagcatggaaaatctagaagaaatcgcaccctcagct
attgcagatgccacaaaaatcttcgtcaacggctgctgggtgggcatccatcgtgaccca
gaacaactcatgggtactctccgcaagttgagacgtcagatggacatcattgtcagtgaa
gtatccatcattcgagatatccgtgaccgtgaaatccgtatctacactgatgcagggcga
atctgtcggcctttgttgatcgttgaaaatcagacattgctcctgaaacgaagccatgtg
gataatctcaaacagcgtgattacaataattacaaatggcaagaactggtatctagcggt
gtggtagagtatattgacacactagaagaagaaacgaccatgattgccatgtcacctgaa
gatttacgacaagacaaagaatatgcttactgtacaacttatacacattgtgagattcat
ccagctatgatcctcggagtttgtgcatccattattccgttccctgatcacaaccaaagt
cccaggaatacttaccagagtgctatgggtaaacaagccatgggtgtttatattacaaat
tatcacgttcggatggacactctagctcatgtactctactatcctcataaaccattggta
acaacaaggtctatggagtacctgcggttccgagaacttccagctggaatcaactccatc
gtagctatcctgtgttataccggttacaaccaagaagattctgtcatcttgaacgcctct
gctgtagaaagaggattcttcaggtctgtgttcttccgttcttacaaagactcagaatca
aagagaatcggagaccaggaagagcagtttgagaaaccaaacaggtcaacttgtcaagga
atgcgtaatgcaatttacgataaattagatgatgatggaataattgcacctggtttaaga
gtttctggtgacgatgttgttatcggaaagaccatcactctgcctgaaaatgatgacgag
cttgaaggcacaacaaagcgatactcaaagagagatgccagcacattcttgcgcaacagt
gaaacagggattgttgatcaagtcatgttgacgctaaacagtgagggatacaagttttgt
aaaattcgagtacgttctgttcgtatcccccagattggtgacaagtttgcctcgaggcac
ggtcaaaaaggtacctgtggtattcaatatcgtcaagaggatatgccgtttacctgcgaa
ggtcttgctccagacatcatcattaaccctcacgccatcccctcccgtatgacaattggt
cacttgatcgagtgccttcaaggcaaggtctcctcaaacaaaggtgagattggtgacgca
acaccattcaacgatgctgtgaatgtgcagaaaatctcaacgctcctccaagagtacggt
taccagctccgaggcaatgaggtcatgtacaacggccattcaggtcgcaaaatcaatgcc
caggtctttttaggaccaacctattatcagcgtttgaagcacatggtggacgacaaaatt
cactcgagagcaagaggacccgttcagatattggtccgtcaacccatggagggaagagca
agggatggaggtctgcgtttcggtgagatggaacgagattgtcagatctctcacggtgct
gcccagtttctacgggagcgtttgttcgaagtatccgatccgtacagaatccacgtttgc
aactactgcggcttgattgccatagctaatctgagaaataacacgtttgagtgcaaaggc
tgtaagaataagacgcaaatttctcaagtaagactgccctatgctgcgaagctgttgttc
caggaactgatggctatgaatattgcacctcgtttgatggttgtatcctaa
DBGET
integrated database retrieval system
