KEGG   Bemisia tabaci (sweet potato whitefly): 109036944
Entry
109036944         CDS       T06019                                 
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
btab  Bemisia tabaci (sweet potato whitefly)
Pathway
btab03030  DNA replication
btab03410  Base excision repair
btab03420  Nucleotide excision repair
btab03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:btab00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    109036944
   03410 Base excision repair
    109036944
   03420 Nucleotide excision repair
    109036944
   03430 Mismatch repair
    109036944
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:btab03032]
    109036944
   03036 Chromosome and associated proteins [BR:btab03036]
    109036944
   03400 DNA repair and recombination proteins [BR:btab03400]
    109036944
DNA replication proteins [BR:btab03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    109036944
  DNA Replication Termination Factors
   ELG1-RFC complex
    109036944
Chromosome and associated proteins [BR:btab03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    109036944
DNA repair and recombination proteins [BR:btab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     109036944
  Check point factors
   HRAD17(Rad24)-RFC complex
    109036944
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid Rad17 AAA_16 AAA_22 AAA_24 AAA_14 AAA_11 AAA_30 RuvB_N AAA_5 AAA_assoc_2 AAA_2 AAA_18 AAA_19 SLFN-g3_helicase Mg_chelatase AAA_7 ResIII bpMoxR AAA_28 Viral_helicase1 AAA_3 ATPase_2 DUF815 AAA_25 ABC_tran AAA_23
Other DBs
NCBI-GeneID: 109036944
NCBI-ProteinID: XP_018906921
LinkDB
Position
Unknown
AA seq 356 aa
MQAFLKTGKLGKDAPSSSSAEPGTSQPVVPKLTPWVEKYRPRTVEEVVEQSEIISVLKQV
LSGGDLPHFLFYGPPGTGKTTTILAAARQLFGDIYRDRILELNASDDRGIQVIRDKVKTF
SQLTAAANKPDGTPCPPYKIVILDEADSMTHAAQSALRRIMEKETRTTRFCLICNYISCI
IPPIASRCAKFRFKPIKSEKIEERLEEIAKNENVSCGKDTIKVLVETCGGDLRRAITCLQ
SCSRLKGSESVVMEDVLEVTGIVPPQWVEKFITVCKNCDHKELEIFVDDLIQEAYSAFQV
LEQLHEKIIESDFTDDQKAIICEKIAIASGRLQDGASEYLQLMDLGCCMINVLSKK
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgcaagctttccttaaaactgggaaacttgggaaagatgccccttcctcatcatcagca
gaacctggaacatctcagcctgtagtgcctaaacttaccccttgggtggaaaaatatcga
ccacggacagttgaggaggtagttgagcaatccgagatcatcagtgtcctgaagcaagtt
ctctcaggaggtgacctcccgcattttctgttctatggtccaccaggcacaggtaaaaca
accactattcttgcagctgcgagacagttattcggagatatttacagggacagaattttg
gaactcaacgcctcagatgatcgaggaattcaagtcattcgtgataaagttaaaacgttt
tctcagctaactgcagcagccaataaacctgatggaacaccatgtccgccgtacaaaatt
gtcatcttagatgaagctgattccatgactcatgcagcccaatctgcccttaggcgcatt
atggagaaagaaacccgcaccaccagattttgtttgatttgtaattatatctcttgtatt
attcctccaattgcttctcgatgtgcgaaatttaggtttaaaccaattaaaagtgaaaaa
atagaagagaggcttgaggaaattgccaaaaacgaaaatgtatcatgtggtaaggacact
atcaaagtacttgttgaaacatgtggaggtgatttgaggcgtgccatcacatgcctccag
tcttgctcgaggttgaaaggaagtgagtctgttgtgatggaagatgttctagaagtcaca
ggaatcgttccccctcaatgggtagagaagttcatcactgtctgtaaaaattgtgatcat
aaggaattagaaatttttgtggatgatttgattcaggaagcgtactcagcgttccaggtt
ttagaacaactgcatgagaaaataattgagagcgattttacggatgaccaaaaagccatc
atctgtgagaaaatagctattgccagtgggcgactgcaagatggggctagtgaatatcta
cagctgatggatctaggttgttgtatgataaacgttttatcaaagaaatga

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