Bemisia tabaci (sweet potato whitefly): 109037366
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Entry
109037366 CDS
T06019
Name
(RefSeq) CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
btab
Bemisia tabaci (sweet potato whitefly)
Pathway
btab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109037366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btab03019
]
109037366
Messenger RNA biogenesis [BR:
btab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109037366
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109037366
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Spectrin_Anc-1
PulA_N1
Motif
Other DBs
NCBI-GeneID:
109037366
NCBI-ProteinID:
XP_018907515
LinkDB
All DBs
Position
Unknown
AA seq
723 aa
AA seq
DB search
MICGQRICETYLFLFDLCNYFPSSDYARAISLLIYLAMAATRKLQGEIDRCLKKVTEGVE
TFEDIWQKVHNATNSNQKEKYEADLKKEIKKLQRLRDQIKSWIACGEIKDKSSLLDYRKL
IETQMERFKVVERETKTKAYSKEGLGAAQKLDPATKEKEEVSAWLVSSIDALNLQLDQFE
SEIESLLVGKKKKLEKDKQERMDELKVKLERHRYHIKKLETLLRMLDNMSVEVSQIRSIK
EDVEYYIESSQDPDFEENEYIYDDIIGLDEIELSGVGPQATDSNGTPTSLASSPPPSPTP
PPISTSSALHNNHSAEPAIDTTTTTTTSTTSEKKKKEEVSKPMVKPTPVRASSNSVQINN
TSTATTPQGKQQQHMNNTSHKQTNSNSSPSSGAAVNHHQTNSLPPVVGNFAAVAAANTSS
HHHPTSKVSSHVNENGSILTSSATISNSVTTVTSSTTTTSMREKQSQQPNLNHSTAPPAS
AHPQENNIGGSSSPLSSISTAPSPLPPSTPPPNDPHASLSSLKTMAQQVIDRAGLEMPQS
DANRGLFENKSSVSESGTCEALIPPLLGVAPLGPVPLQKEHQMQFQMMEAAYYHMPVPSD
SEKIRPYLPRNPFATPSYYIQTPLPHSDTLEFFQRLSTESLFFIFYYMEGTKAQYLAAKA
LKKQSWRFHTKYMMWFQRHEEPKLINEEYEQGTYIYFDYEKWSQRKKEGFIFEYKYLEDR
DLN
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatctgtggacaaagaatttgtgaaacttatttgtttttattcgatctgtgtaattat
tttccatcttcggactatgctcgagctatttcattacttatatacttagccatggctgca
acaaggaagctgcaaggtgaaatcgataggtgtctgaaaaaggttacagaaggagttgaa
acttttgaggacatctggcagaaagtgcacaatgcgacgaacagcaatcaaaaagaaaaa
tatgaagcagatctcaagaaagagattaagaagctgcaaagacttcgcgatcagattaaa
agttggattgcctgcggagagatcaaagacaagagctccctcctggattataggaaactt
attgaaactcaaatggaaagatttaaggtcgttgaaagggaaaccaagactaaagcctac
tctaaagaaggccttggagctgcccaaaagttagatcctgccactaaagagaaggaagaa
gttagtgcatggcttgtgtcatccattgatgctctcaatctacagcttgatcaatttgag
tctgaaattgagtccctccttgttggaaagaagaaaaaactagaaaaagacaaacaagaa
agaatggatgagctgaaggtgaaactagaaaggcacaggtaccacattaaaaaactggaa
acccttctgagaatgctagataacatgtcggttgaagtaagccagataaggagtataaaa
gaggatgtagaatactatatagaatcatctcaagatcctgactttgaagagaatgaatac
atttatgatgatatcatcggattggatgagatagagttatctggagttggtccacaagca
actgacagtaatggaactccaaccagcttagcctcctcacctccaccttcacccacgcca
ccaccgatttccacctcatctgctcttcacaacaatcattccgcagaaccagccattgac
acaactacaacaacaactacttcgaccactagtgaaaaaaagaagaaagaagaagtatca
aaacctatggtaaaaccaacaccggttagagcgtcaagtaactctgtacaaattaataac
acaagcacagcaaccacacctcaagggaaacaacagcaacatatgaacaacacaagtcat
aaacaaacaaatagcaacagctcacccagttcgggagcagccgtcaatcaccatcaaact
aattcactgccgccggttgtcggtaattttgctgcggttgctgctgctaatacttcatct
catcatcatccaacttctaaagtttcttctcatgtgaatgaaaatggttctattctaacg
tcctctgcaacaatttctaatagtgtaacaactgtcacatcatcaacaacgacaacatca
atgagggaaaaacaatcacaacaaccgaatctaaatcatagcacagccccaccggcctct
gctcatcctcaagaaaacaatattggtggttcctcctctccgctttcgtccatttcgaca
gctccttctcccctacctccttcgacacctcctccaaatgatcctcatgcttcattgtcc
tctctgaaaaccatggcccaacaagtgattgatcgtgctggactagaaatgccacagtca
gatgcaaatagaggtttatttgaaaataaatccagtgtaagcgaaagtggaacctgcgaa
gctttaattcctccattattaggtgtagcaccattaggtccagtcccattacaaaaggaa
caccaaatgcaatttcaaatgatggaagctgcctactatcacatgcctgttccatcggac
tcagaaaaaattagaccgtatttgcctcgaaatccattcgcaacaccttcttattatatt
cagacccctctaccgcactcagatactctagaattcttccaaaggttgtcaacggaaagt
ctgttttttatattttactacatggaaggtacaaaagcgcagtacttagccgccaaagca
ttaaaaaaacaaagttggaggttccacacgaagtacatgatgtggtttcaaaggcacgag
gaaccaaaactcatcaatgaagagtacgaacagggaacttacatctattttgattacgaa
aagtggagccaacggaagaaagaaggttttattttcgagtataagtacttagaagacagg
gatctgaattaa
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