Bemisia tabaci (sweet potato whitefly): 109037787
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Entry
109037787 CDS
T06019
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
btab
Bemisia tabaci (sweet potato whitefly)
Pathway
btab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
btab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109037787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btab03019
]
109037787
Messenger RNA biogenesis [BR:
btab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
109037787
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DDRGK
Ras
Motif
Other DBs
NCBI-GeneID:
109037787
NCBI-ProteinID:
XP_018908154
LinkDB
All DBs
Position
Unknown
AA seq
679 aa
AA seq
DB search
MSRHRNIRTLDYSEEYDYDEVFGHSVEEDCILSPSEQAFIYDRSRRNQPPAYFHDQETVK
EEEEEESESAPAESAVKNLSDLETAKLQSCLDEIRSIIGDIESDETISQIVINNGFDVHK
TLDVILKRNDNAPTTLEPLKRQEVPRVKTPITVSSNAAPSDESIPAEATVPTITVATPSK
ASNIIKGFSVPNQSGGSKLNLKDGFHSPRPQSPASGRSSPFDGKSQEEKSVPKFEKLARN
FNVKEKWMEDRGDSKENLHMVVVGHVDAGKSTLVGHLMVKMGLVSSKVLHKYEQESKKLG
KQSFIYAWIMDETGEERNRGITMDIGFTQLETKTKTITILDAPGHKDFIPNMITGATQAD
VALLVVDATKGEFETGFESGGQTREHALLIRSLGVTQLGVVINKLDTVNWSEDRFNEIVA
LLKNFLKQAGFKDSDVCYVPCSGMSGENLTTRSNDPQFAWYQGPTLLDVLENFKCPERSI
EKPFRMTVNDIYKGTGSGFCVSGQIETGALLVNDKVLVQPQNELASVKGLTIDELPIQTV
YAGDSVSITLANFDIQNISIGSVLSDPSQPVAVTSKFECRIVVFNIQVPITKGFPVIVHC
HNVMEPATIKRINAELNRSSGAVVKKKPRCLVKNTSALVVIETSRPICLEKYQDIKQLGR
IMLRVSGSTIAAGLVTQIF
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtcatcgaaatattagaactttagactattctgaagaatatgattatgacgaa
gtttttggacactctgtagaagaggattgcatcctctctcctagtgaacaggccttcatc
tacgaccgctcacgcaggaaccagccaccagcatatttccacgatcaggaaactgtgaaa
gaggaggaagaggaagagtcggagtcagcgcccgcagaatctgctgtaaaaaatctcagc
gatctagaaactgctaaactacaatcctgtttggatgagatcaggagtatcataggtgat
attgaatcggatgaaacgatctcgcaaattgtcatcaataatggattcgatgtgcataaa
actcttgatgttattttgaaaaggaatgacaatgcaccaacaactctagagcctttgaaa
cgtcaggaagtcccaagggtcaaaactccaataacagtttccagcaatgcagcacctagt
gatgagagcattcctgcagaggctactgttccaacgatcaccgtcgcaacgcccagtaaa
gcatctaatataatcaagggtttcagtgttccaaatcagtcaggcggctccaaacttaac
ctaaaagatggctttcattctcctcgacctcagtcaccagcctcaggaagatcaagccca
tttgatggcaaaagtcaagaagaaaaatctgtacctaaatttgaaaaactcgccaggaac
ttcaatgtcaaagagaaatggatggaggatcgtggtgacagcaaagaaaacctccatatg
gttgtcgtaggacacgtggacgctggtaaaagcacactggttggccacctgatggttaaa
atgggtctagtgtcgtcaaaagttctccacaagtacgagcaagaaagcaagaaacttgga
aaacaatctttcatctatgcgtggattatggatgaaacaggagaagagaggaaccgaggt
attacgatggatattgggtttacccagttagaaacgaaaacaaaaacaattacgattctg
gatgctcctggccacaaggatttcattcccaacatgataacaggtgcaactcaagcagat
gtcgcgttgctggttgtggacgcaacaaaaggggagttcgaaactggtttcgaaagcgga
ggccaaacacgagaacatgcacttctgatcagatctttaggagtcactcagctgggagtt
gttatcaataaactagacactgtgaattggtcagaagatcgatttaatgaaatcgtagca
ctattgaaaaactttttgaagcaagcaggatttaaagattcagatgtatgttatgtccct
tgttctggcatgagtggggaaaatttgacaactcgctctaatgacccgcagtttgcgtgg
taccaaggaccaactttattagatgttttagagaacttcaaatgtccagagagatcaatc
gaaaagccttttagaatgactgtcaatgatatatataaagggactggctctggattttgc
gtctcaggtcaaatagaaactggtgctctattagtgaacgataaagtgctagttcagccg
cagaatgaattagcgtccgtaaaaggtttgacgatcgatgaacttcctattcagaccgtt
tatgcaggagacagtgtcagtataacacttgctaattttgacattcagaatatttcaatt
ggaagtgttctgtctgatccttcacaaccagtagctgtcacatccaagtttgagtgtcgc
attgtcgtattcaatatccaagtcccaatcaccaaaggttttcctgtgatagtgcattgt
cacaatgtgatggagccagcaacaatcaagcgaatcaatgcagaattgaatcggagctca
ggagctgtggtgaagaaaaagccgcgctgtctggtgaaaaacacaagtgctcttgttgtc
atagaaacctctcgtccaatctgtttagagaaatatcaggatatcaagcagcttggccgc
attatgcttcgggtttccgggtcaactattgcagctggtctcgtcactcagattttctga
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