Bemisia tabaci (sweet potato whitefly): 109037835
Help
Entry
109037835 CDS
T06019
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
btab
Bemisia tabaci (sweet potato whitefly)
Pathway
btab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109037835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btab03019
]
109037835
Messenger RNA biogenesis [BR:
btab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109037835
mRNA degradation factors
5'-3' decay
Decapping complex
109037835
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40_WDHD1_1st
WD40
MTR4-like_stalk
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
Cytochrom_B562
ANAPC4_WD40
DUF7355
Motif
Other DBs
NCBI-GeneID:
109037835
NCBI-ProteinID:
XP_018908203
UniProt:
A0A9P0C982
LinkDB
All DBs
Position
Unknown
AA seq
1101 aa
AA seq
DB search
MTSMAKPIFQTIDFFGKDAKSSQAITGTDIKIIQSLGQHEIGSSQVKMKNMVDYVWEERF
YTGQLLAVHIGGKYLAYGIKAKTSTGVIRVINSETSARVLIRGMEGLVQDIAFAHIMNHV
ILASVDEKGNLFIHRVLESKDSETALESELLLHVIQDSDLDYCGPHRVIWCPFIPDDDTK
SPGEIIEDVSTLLVLTRGTKAELWNVGMVQNAHGVGPVKPSTVTEGYLEINEHSACIVDA
AFSPDGTAIATAALDGEIKFFQVYMANSTKPRCLHQWVPHDKKPLSSLFFLDNHKSYNPE
IQFWKFVITGAENNSELKVWSCETWTCLQTINFVSSTNSKLQLKASVDLAANYLVLSDIQ
LKVLYVFEIFMNCKKTTTFLISVSEFTVPTAVLSFDIVDAGKKKVKADSTFVLDDLCNGN
GDLEECEGDENTVVVVRMYLVQPKSLQDCHIIFPPVSNEPETSNVLCSLSQEDFLPKEED
PTLPAVDISEQVIQSAQDFTSANHTSGQALNLMTPDAFAAPVKPETCSLSQSPPDFVKQE
EVREKLNQLLASASPPTSQLKEASVVNNETAPDYPHYASGGSSPSREVQEIMLPLTSSQC
YFPKAKPPQPDNYTKESKFPEDYVKESKFSEANVIKFKPSNLSSFQGMCEVDISDSNRSI
SNRRRDSDLGLNTSSKDVDQMSKTLQKLEAAVNNMTLTNNALVQTMIDHQTEYKEYMQDL
KEEIARIEGVVTRGTQQQIVALSREERQNTETVVTAISQVVDNIVSNKLEDIVANEISNA
ILPAILNVLQPFKDEMHLELTKKLSATDSLLKENISKMMTSKGVMEVLSNSLMVSLTPAI
NQCIHDIFTAIGLPTIEKTCQTMFSQVNNAFSKGVKEYANILDQHSRDSLNLSSESASQI
KASTEVMKTGFQQMTMELKKSLAKLEVSLNDSIMKGLQSQQMTLQECVVNTVRSSRAVTP
VVDLNQHLLHLVQQNQINSAFQQALNANDLSLVVLVCSKVDPDKVFMSTSCLLQPPVLLS
LVQQLSADMTLNTDIKILYLEKAVSYFGAIQNTPQWDALSAAPVLLKNLSIQLHQFITNN
SSHKLASTMRMILMAIKTLIP
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaatggcgaagcctatttttcaaacaattgatttttttggaaaggatgccaaa
agcagccaagcaatcacaggcacagacattaaaatcattcaaagtcttgggcagcatgaa
attggtagctcacaagtcaagatgaagaacatggttgattatgtatgggaggaacgcttc
tacacaggacaactcctcgctgtgcatatcggtggaaagtacctagcatatggtattaaa
gctaaaacctcaacgggtgtgattcgagtcattaacagcgaaacatcagcacgtgttctc
atccgtggaatggaaggacttgttcaagacatagcttttgctcacataatgaaccatgta
attttagcctcggtagatgaaaaaggcaaccttttcattcatcgggtcttggaaagtaaa
gactctgaaacagcgctagagagtgaactgcttttacatgtcatccaggactcagatctt
gactactgtggaccgcatagagtgatatggtgtccttttatccctgatgatgatacaaaa
tcaccgggtgaaataattgaagatgtctccacgctacttgtcttaacaagaggcacaaag
gctgaactgtggaatgtaggcatggtacagaatgctcatggtgttggaccagtcaagcct
agtactgtgacagaaggttatctagaaataaacgaacattcagcctgcattgtcgatgct
gccttctcacctgatggcacagcaattgcaacagcagcccttgatggtgaaattaaattt
tttcaagtttacatggccaattctacaaaaccaaggtgtcttcatcagtgggttcctcat
gataagaaaccattatcctctctcttctttttagacaatcacaaatcatataatccagag
atccaattttggaagtttgtcatcacaggagccgaaaataattcagaattgaaagtatgg
tcctgtgaaacatggacttgtctgcagactatcaattttgtctcatcaaccaattcaaag
cttcaacttaaagccagcgttgaccttgctgctaactatcttgttctatcagacatccaa
ttaaaagtcttatatgtctttgaaatattcatgaactgcaaaaaaacaacaactttcttg
atttctgtatcggaatttactgttccaacagctgttcttagttttgacattgttgatgct
gggaagaaaaaagtcaaagcagatagcacctttgttttagacgacttatgcaatgggaat
ggagatcttgaagaatgtgaaggagatgaaaacacagttgttgttgtgcgaatgtattta
gtccagcctaagtctttgcaagactgtcacattatctttccacctgtctccaacgagcct
gaaacatcgaatgtgctttgttctctgtcccaggaagattttttgcccaaagaggaagat
ccaacattgcctgcagttgatatatcagagcaagtcattcaatcagcacaagattttacc
agtgcaaatcacacatctgggcaagcactcaacctcatgacaccagacgcatttgcggcg
cctgtgaaaccagaaacttgcagcctgtcccaaagcccaccagattttgtcaaacaagaa
gaagtaagagaaaagctcaatcaacttctagcttcagccagccctccaacatcacagttg
aaagaagcatctgttgtcaataatgagacagctccagattaccctcattatgccagtggt
ggaagcagcccaagccgagaagttcaagaaataatgcttcccttgacatcaagtcaatgt
tacttccctaaagcaaaaccaccgcaaccagataattataccaaggaatcaaagtttccg
gaagattatgttaaggagtcaaagttctcagaggctaatgtcataaaattcaaaccctcc
aatctctcaagtttccaaggaatgtgtgaagttgatatatcggattcaaacagaagcatc
tctaataggaggcgagactctgatcttggactaaatactagcagcaaagatgtagaccaa
atgagcaaaactttgcaaaaactggaggcagctgtaaataatatgacattaacaaataac
gcattggttcaaacaatgattgaccaccagacggaatataaggaatatatgcaagatcta
aaggaagaaattgcaagaatcgaaggagttgtgacaagagggactcaacaacagattgta
gcgctctctcgagaagaacgacagaacactgaaactgtggttactgctatctctcaagtt
gtagacaacattgtatcaaacaagttggaagacattgttgctaatgaaatcagtaacgca
attttaccagcaatcctgaatgttttacaaccattcaaagatgaaatgcacctagaacta
acaaagaagttaagtgcgactgattcattgctgaaagaaaatatctctaagatgatgact
agtaaaggtgtaatggaagtattaagtaattcattaatggtatcattaacgccagctatc
aatcagtgtatccatgatatatttaccgccattggacttcccacaatagagaagacgtgc
cagactatgttctctcaagtgaataatgcattcagcaaaggtgttaaagaatatgcaaat
attttagaccagcactcacgagattcgttgaatctgagttcagaatcagccagccaaatc
aaggcatccacagaagtcatgaaaactgggttccagcagatgacaatggagctgaaaaaa
tccttagccaaattggaagtttccttgaacgactcaataatgaagggtctacagtcacag
cagatgacattgcaggaatgtgttgtaaacactgttcgatcctcaagagcggtgacccca
gttgttgatctcaatcagcatttgctccacctagttcaacaaaatcaaattaattctgcg
ttccaacaggcgcttaatgcaaatgatcttagtctagtagttttagtatgctccaaagta
gatcctgataaagtatttatgagcacatcatgccttcttcaaccaccagtactgttgtcc
ttagttcagcaactttcagctgacatgaccttaaacacggatattaaaatattgtatcta
gagaaagctgtttcttattttggagcaattcagaacacaccccagtgggatgccttgtct
gctgctcctgtcctgcttaaaaatttatccattcaactccaccaattcatcacaaataac
agcagtcacaagcttgcatcgaccatgagaatgattctcatggctatcaaaactctcatt
ccttga
DBGET
integrated database retrieval system
