Bemisia tabaci (sweet potato whitefly): 109038365
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Entry
109038365 CDS
T06019
Name
(RefSeq) cleavage and polyadenylation specificity factor 73
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
btab
Bemisia tabaci (sweet potato whitefly)
Pathway
btab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
btab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109038365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
btab03021
]
109038365
03019 Messenger RNA biogenesis [BR:
btab03019
]
109038365
Transcription machinery [BR:
btab03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
109038365
Messenger RNA biogenesis [BR:
btab03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
109038365
U7-dependent histone pre-mRNA processing factors
109038365
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Gp58
Motif
Other DBs
NCBI-GeneID:
109038365
NCBI-ProteinID:
XP_018908947
UniProt:
A0A9P0AMH3
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
MSRKKSDVPVEESDVLSIRPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGMDALPFV
DLIEAHEIDILLVSHFHLDHSGALPWFLLKTSFKGRCYMTHATKAIYRWLVSDYIKVSNI
ATEQMLYTESDLEKSLDKIETINFHEEKDVGGVKFWAYNAGHVLGAAMFMVEIAGVKILY
TGDFSRQEDRHLMAAEIPSVRPDILITEATYGTHIHEKREDREARFTSLVHDIVNRGGRC
LIPVFALGRAQELLLILDEYWSQHPELHDIPIYYASSLAKKCMAVYQTFINAMNERIRRQ
IAINNPFVFKHISNLKGIDHFDDIGPCVIMATPGMLQNGLSRELFESWCTDSKNGVIIAG
YCVEGTLAKTILSEPEEVVAMTGQKLPLKMSVDYISFSAHTDYQQTSEFIRILRPQHVVL
VHGEQNEMARLKAALMREYEDDPDTKMEVHNPRNTIAVELTFRGEKVAKVIGNLAVQKPV
KGSNLSGIVIKRNFNYHVVAPEDLSKYTDMATSLVTQSLSVHFSGSFSTLKYLVGHLAGP
VEESVTEEKLRAFDCIDLTLDKKVVTLEWVASPVNDMFADAALAAVLQAEQCGASLASKS
LPSQPMKMDRMHFKECLIEMLQEMFGEDSVPKIFKGEKLFVTVDGKKANIDLTDLSVLCE
EDEALSQMIKSAVTKLHHALSSVKTE
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaggaagaaatcagatgtgcctgtggaagaaagcgatgtactctctatcaggcct
ttgggtgcaggccaagaagtcggaaggtcttgtatcatgctggaattcaaaggaaagaaa
attatgcttgattgtggcattcatcctggtctatctggcatggatgctttgcctttcgtg
gatcttattgaagcccatgaaattgatattctactagtatctcatttccatctggatcat
tctggtgccctaccatggttcttactaaaaacttctttcaaaggccgttgttacatgacc
catgcaacaaaagcaatttacaggtggcttgtgtcagattatatcaaagtgagcaacatt
gcaacggagcagatgctgtacacagagtcagatttggaaaaaagcctggacaagattgaa
acgatcaacttccacgaagaaaaagatgttggtggagtgaagttttgggcctacaatgca
gggcacgtcctaggagctgccatgttcatggtcgaaatcgcaggagtcaagatattgtac
acaggtgacttttcaagacaggaggataggcatttaatggcagccgaaatcccatccgtg
cgacctgatatcttaattactgaagcaacttacggcactcacatccacgaaaaaagggaa
gacagagaagcccgcttcacatcattagtccatgatattgtcaacagaggtggcaggtgt
cttatcccagtttttgcccttggtcgggctcaagaactcctccttattttggatgaatac
tggagtcagcacccagaacttcacgacattccaatctactatgcttcatcactagcaaaa
aagtgtatggctgtttatcaaaccttcatcaatgccatgaacgaaaggatccgtaggcaa
atagcaattaacaatccgtttgtgttcaaacatatctcaaatttaaaaggtatagatcat
tttgatgacattggtccatgcgtgattatggctacacctggtatgctgcaaaatggtctc
tcaagagaattgtttgaatcatggtgcacagattccaagaatggagtcatcattgccggt
tactgcgtggagggaacgttagctaaaacaatcctatcggagccagaagaagttgtcgca
atgacaggccagaaacttcctcttaaaatgtccgttgactacatctcattttctgctcac
actgactatcagcagacaagtgaattcatccgcattctccgccctcaacatgtggttcta
gttcatggagaacaaaatgaaatggctaggctcaaagctgctttgatgcgggaatatgaa
gatgatccggacaccaaaatggaagtccataaccctcgtaacaccattgctgtggagctc
acttttcgtggtgaaaaagttgcgaaggtcattggcaacctagctgtgcagaaacctgtg
aaaggcagcaatctttcaggaattgtcattaaaaggaacttcaactatcacgtagttgcg
cctgaggatttatctaagtacactgatatggcaacatctttggtaactcagtcactttcg
gttcacttctctgggtcgttttcaactttgaagtacctggtgggacatctggctggccct
gttgaggaatcagtgacagaagagaagttaagagcgttcgactgtatcgatctcacttta
gataaaaaagttgtcaccttggagtgggtggcttctcctgtcaatgatatgtttgctgat
gcagcactggcggctgtactccaagccgagcagtgtggtgcatctcttgcatcaaaatct
ctaccctctcaacctatgaaaatggaccgcatgcattttaaggaatgtttgattgaaatg
ctgcaagaaatgtttggtgaagactctgtaccaaaaatattcaagggagaaaagttgttt
gtaactgttgatggaaagaaagccaatatagatttaactgatctatcagtattatgtgag
gaagatgaagctctttcgcagatgatcaagtcagctgtgacgaaactacaccatgctttg
tcatcagtcaaaacggaatag
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