Bemisia tabaci (sweet potato whitefly): 109038778
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Entry
109038778 CDS
T06019
Name
(RefSeq) protein suppressor of forked
KO
K14408
cleavage stimulation factor subunit 3
Organism
btab
Bemisia tabaci (sweet potato whitefly)
Pathway
btab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
btab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109038778
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btab03019
]
109038778
Messenger RNA biogenesis [BR:
btab03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
109038778
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
PRP6_TPR
NRDE-2
Motif
Other DBs
NCBI-GeneID:
109038778
NCBI-ProteinID:
XP_018909511
UniProt:
A0A9P0AHS6
LinkDB
All DBs
Position
Unknown
AA seq
730 aa
AA seq
DB search
MTEDKPDKDKTEKTEVEWGSEKLCQAQAAINENPWDIESWGILIREAQTRWIHDVRPFFE
QLVNTFPTTGRYWKIYIEQEMRGRNFEKVEKLFQRCLIKVLNIDLWKLYLDYVKGTKASL
ATYKEKMAQAYDFALDKIGMDINSFDIWNDYVNFLKSVEAIGSYAENQKITACRKVYQRG
VVNPMNKIEALWKDYIAYEQVINPIIAEKMMMERSRDYMNARRVAKEFEAITKGLNRNLP
SVPPTGHIEELKQVELWKKYIAWEKSNPLRSEDTALVTRRVMFAFEQCLLCMGHHPDVWY
EAAQYLDQSSKTLSEKGDVNASKLFSDEAATIFDRATSTILKHSMLLHFAYADFEEGRMK
YEKVHEIYKTYLELQEIDPTLTYVQYMKFARRAEGIKSARSVFRKAREDPRSNYQIFVAA
ALMEYYCSKDKNIAFRIFELGLKKFSHTPEYLLCYIDYLSHLNEDNNTRVLFERVLSSGS
LESEKSVEIWNRFLEFESNIGDLSSIVKVEKRRSAVLSKIAEFEGKETAQLVDRYKFLNL
FPCTPAELKAIGYNEVTQNIAKSFQAAKSGGPIISSLDVMDDGDAAQRNLPKPDVSQMIP
YKPKRNAFIGEHPIPGGSFPPPPAVAQLMATLPPPGCFHGPFVAVDQLLEIFDKIQIPDK
PPVPKGDNGCDTRLFDFTSSIHWMENDDSVLNSGIRRKRKAGGGDESDEEENVAPPVYDI
YRIRQQKRVK
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagacaaaccggataaggacaagaccgagaaaacggaagtggaatggggaagt
gaaaaactatgccaagcgcaggcagcgatcaatgaaaatccttgggatattgaatcttgg
ggtattttgatacgagaagcccaaaccagatggattcatgatgtacgccctttctttgag
caacttgtcaacacttttccaacaaccgggcgttactggaaaatttacattgaacaagag
atgagaggcagaaattttgaaaaagttgaaaagctttttcaaagatgcctaatcaaggtt
ttgaacatcgatctgtggaagctatatctcgattatgtcaaaggaacaaaagcaagttta
gcaacttacaaagaaaaaatggctcaagcgtatgattttgcccttgataaaataggaatg
gatatcaactcctttgatatttggaatgattacgtaaactttctcaaaagtgtagaagcc
attggatcttatgctgagaaccaaaaaattactgcttgtaggaaggtttaccaacgagga
gttgtgaatccgatgaataaaattgaagcattgtggaaggattacatagcttacgaacaa
gtcatcaaccctatcatagctgaaaaaatgatgatggagcgaagcagagattacatgaac
gcacggcgagttgccaaggaattcgaagctatcactaagggtctcaatagaaatttgcca
agcgttccaccaactggtcacatagaagagttgaaacaggtagaactgtggaagaaatat
atcgcatgggaaaaatcaaatccgttgcgttcagaagacactgccttagttacacgcagg
gtcatgtttgccttcgagcaatgtttgctgtgcatgggacaccatccagatgtgtggtat
gaagcagctcagtatttagaccaaagttccaaaacactctccgagaaaggggatgtgaat
gcatcaaaactatttagcgatgaagctgcaacaatttttgaccgagcaacatcaactatt
ttaaagcatagtatgctcctccactttgcgtatgccgattttgaggaaggcaggatgaag
tatgagaaagtgcatgaaatttacaaaacgtatctggaactgcaggaaatagatcctact
cttacttatgtgcagtatatgaaatttgctagaagagcagaaggaattaagtcagccaga
tcggtgtttcggaaagcaagggaggacccccgttccaattaccagattttcgtggcagca
gccttgatggagtattattgtagtaaagataaaaatattgcatttaggatttttgaatta
ggactgaaaaagttctctcacacgccagaatacctgttgtgttacatagactacttatca
catttgaacgaagataacaacacacgagtgctctttgaacgtgtcctctcatcgggtagt
cttgagtctgaaaaatctgttgaaatttggaataggttcttagaattcgagtccaacata
ggtgatttaagtagtattgtaaaagttgaaaaaagaaggagtgctgttttgagtaagatt
gcagagttcgaaggtaaagaaaccgcccagttggttgataggtacaagttcctgaacctg
ttcccttgcacccctgcagagttaaaagcaataggctacaatgaagtcactcaaaatata
gccaagtcattccaagctgccaagtctggcgggccgatcatctccagcctggacgtgatg
gatgacggagatgcagctcagagaaatctcccgaagccagacgtatcacaaatgattcca
tataagcctaaacgaaatgcattcatcggtgaacatcctatcccaggtggcagcttccct
ccacctcctgccgttgctcaactaatggccactttgccaccccctggttgttttcatgga
ccatttgttgctgtggatcagcttctggagatatttgataaaatccaaattccagataaa
cctcctgttccaaaaggtgacaacggttgtgatactcggttatttgacttcaccagctct
atccactggatggagaacgatgattcagtcttaaacagtgggatcaggaggaaacggaaa
gcaggaggaggggatgaaagtgatgaagaagaaaacgtcgctccacctgtctacgacatt
tatagaataagacagcaaaaacgagtcaaatga
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