Bemisia tabaci (sweet potato whitefly): 109038854
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Entry
109038854 CDS
T06019
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
btab
Bemisia tabaci (sweet potato whitefly)
Pathway
btab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
btab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109038854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
btab03041
]
109038854
Spliceosome [BR:
btab03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
109038854
Complex C
U5 SnRNP specific factors
109038854
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
109038854
NCBI-ProteinID:
XP_018909619
UniProt:
A0A9P0A0J9
LinkDB
All DBs
Position
Unknown
AA seq
2370 aa
AA seq
DB search
MAIPPYMLPPGWASVMVQQQQMHAAAVHAQMQAAQQQQLQQQQQQQHVLPFPTQPKLPEA
LSEEKLQEKAQKWQQLQSKRFAEKRKFGYVDAQKEEMPPEHIRKIIRDHGDMSSRKYRHD
KRVYLGALKYMPHAVMKLLENMPMPWEQIRDVKVLYHITGAITFVNEIPWVVEPIYIAQW
GTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNVLDVEPLEAIQIELDPDEDGPVH
KWFYDHKPLIGTKHINGSTYRKWNLTLPQLATLYRLANQLLTDLVDENYFYLFDSKSFFT
AKALNMAIPGGPKFEPLIKDANPADEDWNEFNDINKIIIRQPIRTEYRIAFPYLYNNLPH
YVHLSWYHAPNVVYIKTEDPDLPAFYFDPLINPIAHRHSVKVVEPLPDDEEEFELPEEFQ
PFLQETPLYTDNTANGIALLWAPRPFNTRSGRCRRAIDVPLVKSWYREHCPPGQPVKVRV
SYQKLLKYFVLNALKHRPPKPQKKRYLFRSFKATKFFQTTSLDWVEAGLQVCRQGYNMLN
LLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLIIDSHVQYR
LNNVDAFQLADGLQYVFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPVGKGP
GCGIWAPGWRVWLFFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLEL
RASVMHDIVDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPTPIENMILRYVKM
KADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYISPEE
AVAIYTTTVHWLESRRFAPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREELG
LIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSHLVPVYDVEPLEKITDAYLDQY
LWYEADKRRLFPPWVKPGDTEPPPLLVYKWCQGINNLHDVWDVSEGECNVLLESKFEKIY
EKIDLTVLNRLLRLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFIVQYYG
LVLDLLVLGLQRASEMAGPPQMPNDFLTFQDVQTEAAHPIRLYCRYVEKVHIFLRFTAEE
ARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRST
TTIQWENSFVSVYSKDNPNLLFNMSGFECRILPKCRTTHDEFTHRDGVWNLQNEITKERT
AQCFLRVDDESLQRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELL
DLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQ
TDVGITHFRSGMSHDEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEANAQNRRLTL
EDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHDGKLW
NLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSG
LNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKV
HESIVMDLCQVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFAAYKWNVSRPSLL
ADSKDVMDNTTTQKYWIDVQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGVLIAI
DLAYNLHSAYGNWYPGCKPLIQQAMAKIMKANPALYVLRERIRKALQLYSSEPTEPYLSS
QNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTS
VWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIK
GSELQLPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHV
NTERTKVILKPDKTTITEPHHIWPTLNDDEWIKVEVQLKDLILADYGKKNNVNVASLTQS
EIRDIILGMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHGDEIITSTTSNYETQ
TFSSKTEWRVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNILKKFVTISDLRAQIA
GYLYGVSPPDNPQVKEIRCIVMPPQWGTHQTVHLPNQLPSHQYLKEMEPLGWIHTQPNEL
PQLSPQDITTHAKVMADNASWDGEKTVVMTCSFTPGSCSLTAYKLTPSGFEWGRQNTDKG
NNPKGYLPSHYEKVQMLLSDRFLGFFMVPAQGSWNYNFMGVRHEPGMKYELQLANPKEFY
HEVHRPAHFLNFSSLEDGDGVGADREDMFA
NT seq
7113 nt
NT seq
+upstream
nt +downstream
nt
atggcgataccaccttacatgctgccccctgggtgggcatctgttatggtgcagcagcag
caaatgcatgctgctgcagtccatgcgcagatgcaagcagcacaacagcaacagttacag
caacaacagcagcagcaacatgttctgccgttccctacgcagcctaaactcccagaagct
ttaagcgaggagaagcttcaagaaaaagcacaaaaatggcagcagcttcaatccaaaaga
tttgctgaaaaaagaaagtttgggtatgtggatgcacagaaagaagaaatgcccccagaa
catataagaaaaatcatccgtgatcatggagatatgagtagtagaaagtacagacatgac
aagcgagtctaccttggcgctttgaaatacatgcctcacgccgttatgaagctattagaa
aatatgccaatgccatgggaacagattcgtgatgtgaaagttctgtaccatataactggt
gccataacgttcgtcaatgaaataccgtgggttgttgaacctatctatattgcacagtgg
ggaacgatgtggattatgatgaggagagaaaaacgtgataggcgacatttcaagagaatg
aggttccctccatttgatgatgaagaacctcccctagattatgccgataacgtcttggat
gttgaacccttagaagctatccagatcgaactggatccggatgaagatggcccagtccac
aaatggttttacgaccataagcctctaatcggaaccaaacacatcaatggttcaacttat
cggaagtggaatttgacattgccacaactagcaaccctgtatagacttgccaatcagctc
ctaacagacttggttgacgaaaattacttctacctgttcgattcgaagtcatttttcaca
gccaaggctttgaacatggcaatacctggtggacccaaatttgaaccgttaatcaaggat
gcaaatcctgcggatgaagattggaatgaattcaacgacatcaacaaaattatcatccgg
caaccaatccgtactgaatacagaatagcatttccttatctgtataacaatctccctcat
tatgtccatttatcttggtatcatgctccaaatgtagtctacatcaaaactgaggaccct
gatttaccagctttttactttgaccccttgatcaatccaattgctcacaggcattctgtc
aaggtggtagaacctctgccagatgatgaggaagaatttgagctccctgaagaattccaa
ccctttttgcaagagactccgttgtacacagataacacagccaatggaatcgctttgtta
tgggctccaaggcctttcaacactcgttctggacgttgcaggagagccatcgatgttcct
ttggtgaaaagttggtacagagagcactgtcctcctggccagccggtgaaagttcgtgtc
agctatcagaagctgttgaaatactttgtccttaacgctttgaaacaccgtccccctaaa
cctcagaagaaaaggtatcttttccgatcctttaaagccacaaagttcttccaaacaaca
tcgttggactgggttgaagcagggctccaggtttgccggcaaggatacaatatgctgaat
ttgttgattcaccggaagaatctaaattacttgcatctggattacaacttcaatttgaaa
cctgtcaaaacgcttactaccaaagagcgtaaaaagtcccgtttcggaaatgctttccat
ctgtgtcgagaaatcttgcgtctgaccaagttgataattgactcgcatgtccagtaccgg
ctgaataacgttgatgcattccagttggctgatggtttgcagtatgtctttgcccatgtg
ggtcagctaacgggtatgtacaggtacaagtacaaactaatgaggcagattcggatgtgc
aaggacttgaaacacttaatctactacagattcaacacgggtccagttggcaagggacca
ggttgcggtatttgggctcctggttggcgtgtctggctattcttcatgcgaggaatcaca
ccactactagaacgatggcttggaaaccttctgtcaaggcaattcgaaggacgtcactca
aaaggagtcgctaagacagtgacgaagcagcgagttgagagtcattttgatcttgaactg
cgagcctctgtgatgcatgacattgtcgacatgatgcctgaaggaataaaacagaacaaa
gcacgaaccatcctccagcatttgtctgaagcgtggcggtgttggaaagctaatataccg
tggaaagttccaggactgccgacccccatcgaaaatatgatcctgcgttacgtgaaaatg
aaggctgattggtggacaaacacagctcactacaaccgagaacgtattcgacgtggtgca
actgtggacaaaacggtctgcaagaagaatttggggcgtcttactcgattgtacttgaaa
gctgaacaagagagacagcataactacctgaaggatggaccctacatttcaccagaagaa
gctgttgcaatctacacaacaactgtgcactggttagaatcacggcgcttcgctccaatc
ccgttcccgcctctctcatacaagcatgacacgaaacttctaattttagctctcgagagg
ctcaaagaagcatacagtgtcaaatcacgcttgaaccaaagccaacgagaagaattaggt
ttgatcgagcaagcatacgacaatcctcacgaagcactgtctcgtatcaagcgtcatttg
ctgacgcagagagccttcaaagaggtcgggattgagttcatggatctgtacagccatctt
gtaccagtatacgatgtggagccattggaaaaaatcacggatgcatatcttgaccaatac
ctgtggtatgaagcggacaagcggcgactgttcccaccatgggtcaagcctggagataca
gaaccccctccacttctagtctacaaatggtgtcaaggcatcaacaacctacacgatgtc
tgggatgttagtgagggtgaatgtaacgtcctgctggaatcaaagttcgagaagatctac
gagaaaattgatttgaccgtgttgaatcgacttttgcgtctgattgtcgaccacaacatt
gctgattacatgacagccaagaacaacgtcgtcatcaactacaaagacatgaaccacact
aactcctatggtatcatacgtgggcttcagtttgcatcatttatcgtccagtactatggg
cttgtccttgatctcctggttttgggtctgcagcgagcctctgagatggctggcccgcca
caaatgcccaacgatttcctcacgttccaggatgtccaaacggaagcggcccatcctata
aggctgtattgtcgctatgttgaaaaagtccacatattcttaagattcacagcagaagaa
gcacgagacctaattcaacgctatctgacagagcatccggatccaaacaatgagaacatc
gttggctataacaacaagaaatgctggcctcgtgacgctcgcatgcgtctgatgaagcat
gatgttaatttgggtcgagccgtgttctgggacatcaagaaccgtctgcctcgctctacc
accactattcaatgggaaaacagttttgtcagcgtctactcgaaagataatcccaatctc
ctcttcaacatgagtggttttgaatgcaggattctgccaaagtgtcgtacaacgcatgat
gaatttactcaccgtgatggcgtctggaatctgcagaatgaaattacaaaagagcgtact
gcccaatgtttcttgcgtgtagacgatgaatccctacagcgcttccataatcgagtgcgt
caaattctcatggcttctggttcaacaacattcacgaagattgtgaacaagtggaataca
gcactaattgggctcatgacctatttccgtgaagctgtggtcaatacccaagagctcctc
gacttgcttgtcaaatgtgaaaacaagattcagacacgtatcaaaattggtctcaactcc
aaaatgccctcaagattcccgccagttgttttctacacccctaaagaacttggtggttta
ggtatgttatcaatgggtcacgtcttgattccccagtcagacttgcgttggtcaaaacaa
actgatgttggcatcacccatttccgatcaggtatgagccacgacgaagatcagctcatc
cccaatttgtacagatacattcaaccctgggagtcggaatttattgattctcagcgcgtc
tgggctgaatatgccctgaaaagacaagaagcaaatgcccagaacagacgtttgacactg
gaagatctcgaagacagttgggaccgtggtatcccaagaatcaacactcttttccagaag
gaccgacacaccttggcctacgataagggatggagaattaggactgaattcaaacagtac
caggttctgaaacaaaatccattctggtggacccatcagcggcatgacggcaaattatgg
aacttgaacaactatcggacagacatgatccaggccttgggaggtgttgaaggtattctg
gagcacacactcttcaaaggaacctatttcccaacctgggaaggtctgttctgggagaaa
gcctcaggtttcgaggaatccatgaagtacaaaaagctgaccaacgcccagcgatctggt
ttgaatcaaatcccgaaccgtcgattcacactttggtggtcaccaaccatcaaccgtgct
aatgtctacgttggtttccaagtccagcttgatttgactggtattttcatgcacggcaag
attccaacgctcaagatttccctgatccagattttccgagcccatttgtggcagaaggtc
cacgagtcaatcgtaatggatttgtgtcaagtgttcgatcaagagctagatgctctagag
attgaaacagtccaaaaagagacaattcatccccgtaaatcatacaaaatgaattcatcg
tgtgcggatattttgttgtttgctgcatacaagtggaacgtctctcgaccgtcattactt
gccgactcaaaggatgttatggataacacaaccacacagaaatattggatcgatgttcag
ttacgatggggagactacgattctcacgatattgagcgttatgcccgcgccaagtttttg
gattacacaactgataacatgtctatctatccatcaccaactggagttctcattgcgatc
gacctagcatataatttgcacagtgcctatggtaactggtaccctggatgcaagcccctg
attcagcaagccatggctaaaataatgaaagcaaaccctgcattgtatgtgttacgtgaa
cgtatccgcaaagcactccagctttattcctcagagccaacagagccttatttatcctca
caaaactatggagaactcttctcaaatcagatcatctggtttgtagatgacacaaatgtg
tatcgagtcactattcacaaaacgtttgaaggaaatttaacgacaaaaccgattaatgga
gctatcttcattttcaaccctcgcacaggtcagttgtttttgaagatcattcacacatct
gtctgggctggccagaaacgtttgggacaattggcaaaatggaaaacagcagaagaagtg
gctgccttaattcgttctctacctgttgaagagcaacccaagcagatcatcgtaacccgt
aaaggaatgttggatccattggaagtgcacttgcttgatttccctaacatcgtaatcaaa
ggatcggaactacagttgccgttccaggcttgccttaaggttgagaagtttggtgacctc
attctaaaggccaccgagccgcaaatggtgctgtttaatttgtatgacgattggctcaag
acaatctcgtcgtacactgcattctcaaggctgatcttaattctgagagcactgcatgtc
aacacagagcgaactaaggttatcttgaaaccggacaaaactacgatcaccgagccgcat
catatctggccaacgttgaacgacgatgaatggatcaaggtggaagtccaattgaaagac
ctaattctggccgactacggtaagaaaaacaacgtaaatgttgcctctttgacgcagtct
gagattcgtgacatcattttgggtatggaaatctcagcaccatctgctcaacgacagcag
attgccgaaattgaaaagcagaccaaagaacagtctcagctcacagctacaacgactagg
actgtcaacaaacatggagatgagatcatcacgtcaacaacatcgaactacgagacacag
acattcagttccaaaactgaatggagagtcagagccatatcagctacgaatttgcatctg
cgtacgaaccacatctacgtgtcctcagatgacatcaaggaaactggctacacgtacatt
ctccccaagaatattttgaagaagttcgtcacaatatcggatcttcgagcacagattgct
ggttatttgtatggtgtgagtcctcctgacaacccacaggtcaaagagatccgatgtatc
gtcatgcctcctcagtggggaacacatcaaactgtgcatcttccaaatcaactaccatcg
catcagtatctgaaagaaatggagccacttggatggattcacactcagcccaacgagttg
cctcaactttcaccgcaggacatcacaacccacgctaaagtaatggctgacaatgcatct
tgggatggagagaaaaccgtcgtcatgacgtgcagtttcacacccgggtcttgctcgtta
acggcttataaattgacgccaagtggttttgaatggggtcgacaaaacacagacaaaggc
aacaatcctaaagggtaccttccgagtcattatgagaaagtccagatgttgttgtctgat
cgattccttggatttttcatggtaccagctcaaggatcgtggaactataatttcatggga
gtgagacatgaacctggaatgaagtacgaattgcagttagccaatcccaaagaattttac
catgaagttcaccgcccggcgcatttcctcaacttctcatcattagaggatggtgatggg
gttggagctgaccgcgaagacatgtttgcctaa
DBGET
integrated database retrieval system
