Bemisia tabaci (sweet potato whitefly): 109039150
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Entry
109039150 CDS
T06019
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
btab
Bemisia tabaci (sweet potato whitefly)
Pathway
btab03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
btab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
109039150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
btab03400
]
109039150
DNA repair and recombination proteins [BR:
btab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
109039150
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
CBM_15
AAA_27
Syntaxin-18_N
Cas6b_C
Motif
Other DBs
NCBI-GeneID:
109039150
NCBI-ProteinID:
XP_018910065
LinkDB
All DBs
Position
Unknown
AA seq
915 aa
AA seq
DB search
MVEPATKLNLDPKQQQRFIAFFKSLPQKPATTIRFFNRTDFYTLHGSDAVFAAKEVYKTT
SFLKMIGSENDKLESIILNKNNFESFLRDLLLVKSYRVEVYCNKPTAKGSASWVLEFKGS
PGNLSQFEDLLFDSVDQVEWNCVAAIKIGTKNKDKVVGVAMVDAVDHKFNVCEFVDDEYF
TNLGAFITQHGPKECLVPDGCCENAKKVVSRGGILVSSRKNAEFSDDGLVQELNKLLLFQ
DGQLEKAAALPEMNLKIAAGALHAIIKYLELLSNQENYAQYSISTFELSKFVHLDASAVQ
ALNITPQSQSTIFNKHHSIIGLLDKCRTSHGHRLLAQWIKQPLCDINAIQERHDIVEALA
TDITLRASLHDDHLRRIPDLQALSKKVHRKKANLQDCYRIYQAVSKLPDLLNSLETSYQD
NPQPTLSSCFITPLKEQITELDKYQEMVQSTIDLDSVDKGEYLIKSEFDQDLQDYREKME
KLEEQMKKHLTSVASDLDYQAHKQIKLESNSMHGFFFRVTLKDAKAITRNKSYEVLDTNK
GGARFRTKKLDSLNEEYLQIRENYTKHQESIVNEVVSIAAGYTNTLQFLSFTLAQLDVLC
SFAMVAESAPKPFVRPKMHPKGTGILSLKQCRHPCLELEDGISYVPNDVHFEQGKSTFII
ITGPNMGGKSTYIRSIGVTALLAHIGCFVPCDSAEISILDAILARMGAHDSQLKGMSTFM
VEMVETSSIIRKATADSLVIIDELGRGTSTYEGCGIAWAIVEHLAKEIKCPSLFATHFHE
LTRLADEIETIHNFHVTALTLEDKLLLLYQVKPGVCNRSFGIHIAKMAKFPDRVVEESEQ
ELQELEDFQAAAASLPENDRKRHIQEGEQLMEDFYSKVMRLKTSESSEEDIEKKFEELKQ
DLLSKKNPYIEALIK
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaaccagcgaccaaactgaacttagatccaaagcagcaacagcggttcatcgca
ttttttaaaagtttgccacagaaacctgctactaccatcagattttttaatcgaactgat
ttttacactcttcatggatcagatgctgtttttgctgccaaggaggtctacaaaacaaca
tcttttctgaagatgatcggttcagaaaatgacaaactggaatcaatcattttgaataag
aacaacttcgagtcttttttgagggatctgctcttggtgaaatcctaccgggttgaagtc
tactgcaataaacctacagccaaaggatcagccagttgggttctagaattcaagggttcg
ccagggaatttgtcgcagtttgaagacctcttatttgacagtgtggatcaagttgaatgg
aactgcgtggcagctatcaaaattggaactaaaaataaagacaaggtcgttggcgtggca
atggtagacgctgttgaccacaagtttaatgtctgtgaatttgtcgatgatgagtatttc
acaaatctgggagcttttattactcagcatggtccgaaagaatgcttagtgccagatgga
tgctgtgagaatgccaaaaaggtagtttcacgaggaggaattttagtcagcagccggaaa
aatgccgaattctctgatgatggcctggtacaagagttaaataaacttctcctgtttcaa
gacggtcagttagaaaaagctgctgccttgccagagatgaacctcaaaatagccgctggt
gctttacacgcaatcatcaagtatttagagctgttgtccaaccaagaaaattatgcgcag
tactcgatatcaaccttcgaactttccaaatttgtacatttagacgcatcagcagttcaa
gctctcaatattactcctcaatctcaatctacgatttttaacaaacatcattccattata
gggctattagacaaatgcagaacttctcatgggcacaggctcctggcccagtggattaaa
caaccattgtgtgacatcaatgcgattcaagaaagacatgatattgttgaagctcttgca
acggatattaccttaagagcaagtttacacgatgatcatttacgtcgtattcctgacctg
caagctctctcaaagaaagtacatcgcaaaaaagctaatttgcaagattgttaccgaatt
tatcaggctgtctcaaaattgccagatctgttaaatagtctggagacaagttatcaagat
aatcctcagccgacgctttcatcttgttttatcactcctctcaaggaacagatcacagag
ctggacaaatatcaagaaatggttcaatccacgattgacttggattcagtcgataaagga
gaatatttaataaagtctgaatttgatcaagatttacaagactacagagaaaaaatggag
aaacttgaagaacaaatgaaaaaacacttaacatctgttgcatctgatttggattatcaa
gcgcacaaacaaatcaaattagaatcaaattccatgcatggatttttctttagagttaca
ctcaaagatgccaaggcaatcactcggaacaagtcttatgaagtgttggatacaaataaa
ggaggtgcacgatttaggacaaaaaaattggattctttaaatgaagaatatttacaaata
agagaaaactatacaaaacatcaagaatcgatagtaaatgaagtggtgtccattgcagcg
ggatacaccaacacattacaatttctaagttttactttggcccaactagacgttctctgc
agttttgctatggttgccgaatcagcacctaaacctttcgttcgtccgaaaatgcatcca
aaaggaactggaattttatctcttaaacaatgcagacatccatgtttagaattagaggat
gggatttcctatgttcccaatgatgttcattttgaacaaggaaagtcaaccttcattatc
atcacgggtccaaacatgggtggtaagagtacatacatcaggagcattggagttactgct
ctcttggcccacataggttgttttgtaccgtgtgattccgctgaaatcagtattcttgac
gcaatcttagccaggatgggagctcatgactctcagctgaaaggcatgtcaacgttcatg
gtcgaaatggtcgagacttcctctatcatacggaaagccactgccgattctcttgtgata
attgatgaactaggccgcgggacttcaacctatgagggctgcggaatagcatgggccatt
gtcgagcatctagcaaaagaaatcaaatgtccatcattatttgcaactcatttccacgaa
ctgacccgtttggcagatgaaatagagacaattcacaatttccatgtcacagctctcact
ttggaagacaaactgttattattgtatcaagtcaaaccaggcgtctgtaatcgaagtttt
gggattcacatagcgaaaatggccaaatttccagatcgtgtcgtagaggaatctgagcaa
gaattacaggaattggaggattttcaagctgcagctgcttctttgcctgaaaatgaccga
aaaagacacatacaggaaggagaacaactaatggaagatttttacagtaaggtgatgagg
ctgaaaacgtctgaatcatcagaagaggatattgagaaaaagtttgaagaactgaaacag
gatctgttgtcgaagaaaaacccctacattgaagcattaatcaaataa
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