Bemisia tabaci (sweet potato whitefly): 109040769
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Entry
109040769 CDS
T06019
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
btab
Bemisia tabaci (sweet potato whitefly)
Pathway
btab03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
btab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109040769
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
btab03021
]
109040769
Enzymes [BR:
btab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
109040769
Transcription machinery [BR:
btab03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
109040769
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
tRNA_Me_trans
DUF2703
Motif
Other DBs
NCBI-GeneID:
109040769
NCBI-ProteinID:
XP_018912364
LinkDB
All DBs
Position
Unknown
AA seq
1379 aa
AA seq
DB search
MVKEEYREPNVTKNISHVSFGIDSAQQMQQQAHLHVVAKSLYQQDPQRTPIPHGVLDRKM
GTNQKDANCATCGKGLAECIGHYGYIDLELPVFHVGYFRSVINILQTICKNPMCARVLLT
SAESQIYRAKVRNPALSYLVRKALRKQIQDKAKKKTICPHCGDINGVVKKCGLLKISHEK
YRNKKQESIIQQKLEEFNEAVKSNPEIEANRKYGLIQILNPLEVLRLLETVPTEDVPLLL
MNPDRSLPSDLILTRIPVPPICIRPSVISDLKSGTNEDDLTMKLTEIVFINDVIMKHRQS
GAKIHMLNEDWEFLQLHCALYINSETSGIPANMQPTKSSRGLVQRLKGKQGRFRGNLSGK
RVDFSSRTVISPDPNLQIHEVGVPVHVAKILTFPERVHAANKEYLRTLIMNGPDVHPGAN
FVEQQGSKFKKFLRYGNRRKIAQELKEGDIVERHLVDNDVVLFNRQPSLHKLSIMAHQAK
VLPNRTFRFNECVCTPYNADFDGDEMNLHLPQTEEARAEALVLMGNRSNLVTPRNGELLI
AATQDFITGGYLLTHKDTFLNRNEISRLISWLITKTSALEIELPAPCIIKPVPLWSGKQV
FSVLLRPNKWSPVLSNLKAKGRAYTSNEELCIKDSFVLIRNSKLIAGVMDKTTLGSGSKN
NIFYILLRDWGESVATTAMWLLARIASYYLMNRGFSIGIGDVTPGQGLLKAKYSLLKAGY
TNCDDFIKAMASGKLQCQAGCTAEETLEAVILKELSVIRDHAGKACLKELHPSNSPLVMA
VCGSKGSFINISQMIACVGQQAISGKRVPNGFENRSLPHFERHSRSPAAKGFVGNSFYSG
LTPTEFFFHTMGGREGLVDTAVKTAETGYMQRRLVKSLEDLCLQYDNTVRNSNGDIVQFS
FGGDGLDPTYMEGNGCPVELKRVLENITAIYPCRHEPNLTSEEVTFVTDEILKSKEMESC
GTVFIEELRKFMTDFVSRTPEYEKLRKEMTVFKEVQRLTMTQLVKFIKTCRDKYIRAKIE
PGTAVGALAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINASKVISTPIITAY
LEEDEDESFARAVKARIEKTTLGDVTEYMEEVYLAHDCYLVIKIDTLRLKLLQLEVDIES
ICVSIATAKLNLKHHQIKPDSDAVIHIYPDSLRMSLDMTLKVLKDQLPNVVISGLPGVNR
AVIHEDNSAGKTKYKLLVEGDNLKDVMATRGVNGKKCTSNNTYQVYATLGIEAARSTVMT
EIESVMENHGMSIDHRHSMLVADLMTSHGETLGITRHGLAKIKESVLNLASFEKTADHLF
DAAYYGQTDVISGVSESIIMGIPVSIGTGIFKLLHKSNKSDHLQQRPLLFNNTRYHPTP
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggaagaatatagggagcccaatgttacgaaaaatatctctcatgtcagcttt
ggcattgatagcgcacagcagatgcagcagcaagcgcatctacatgtcgtcgcaaagagt
ttgtatcagcaagatccccagcgtacaccaattcctcatggagttcttgatcgaaaaatg
ggaacaaatcaaaaagatgcgaactgtgcaacgtgtggtaagggtcttgctgagtgcatt
ggtcactatgggtatattgacttggagcttcctgtttttcatgttggctactttcgatct
gtgataaatattctgcaaactatttgtaagaatcccatgtgtgcccgtgttctgttgaca
agcgctgaaagtcagatctatcgagccaaagttagaaatcctgctctctcatacttagta
agaaaagctcttaggaaacaaatccaagataaagcaaagaagaaaacaatctgtcctcat
tgtggcgacatcaacggcgttgtaaaaaaatgcggattgttgaaaatcagtcatgagaag
taccggaataaaaaacaagaatctattattcagcaaaaacttgaggaattcaatgaagct
gtaaagtcgaatccagaaatagaagcaaaccgaaagtatggtctaattcaaattttaaat
cctctagaagttttacgtttgctggagacagtaccaacagaagatgtccccttacttttg
atgaaccccgatcgctctttaccaagtgacctcattcttaccagaataccagtccctcca
atatgtattcgtccttcagttatctcagatttgaaatcaggcactaacgaagatgatctg
actatgaaacttacggagattgttttcatcaatgatgttatcatgaaacatcgccagtct
ggagcaaaaatacacatgttgaatgaagattgggagtttttacaacttcactgcgctctt
tacatcaatagtgaaacttctggtattcctgctaacatgcaaccaacaaagtctagtcga
ggtcttgtgcaaagattgaagggaaagcaaggtcgcttcagaggaaatctctctggtaaa
cgtgttgatttttccagccggactgtgatatctccagaccctaatctccagatccatgaa
gttggtgttcctgttcatgttgccaaaatcttaacttttccagaacgtgttcatgcagca
aataaagaatatctaaggacactaataatgaatggacctgatgttcatccaggagctaac
ttcgttgaacagcaaggttccaagtttaagaagttcctccgttatggcaacaggagaaaa
attgcacaagaattgaaggaaggggacatagttgaaaggcatcttgttgacaacgatgtt
gttctattcaatcgccaacctagtttacacaagttaagtataatggctcatcaagcgaaa
gtcttacccaaccgaacttttcgcttcaatgaatgtgtgtgtactccttacaacgctgat
tttgacggtgatgaaatgaacttacatctgccacagaccgaagaagccagggcagaggct
ctagttttgatgggtaacagatctaatcttgttacgcctcgtaatggagagttattgatt
gctgcaacacaggatttcatcactggtggttaccttctgacccacaaagacactttcctg
aataggaatgaaatttccaggttgatatcttggttgataacaaaaacatcagctttagaa
atcgaattaccagcaccgtgtatcataaaaccagtgcctctgtggagtggtaaacaagtt
tttagtgttctactccgtccaaacaaatggagtccagttttgtcaaatttaaaagcgaaa
gggcgagcttatacctctaatgaagaactgtgtatcaaagattcatttgtactgatcagg
aactccaaattgatagctggtgtcatggataaaacaacacttggatctggaagtaaaaac
aacattttctacatccttttgagagattggggagaatcagtagcaacaactgccatgtgg
ttgttggcaagaattgcatcttattatctaatgaacagaggattttctattggtattggt
gatgtgactcctggtcaaggacttcttaaagcaaaatacagtctcttgaaagctgggtac
acaaactgtgacgatttcatcaaagcaatggccagtggcaaattacagtgtcaagctggt
tgcactgcagaagaaactcttgaagctgtcattttgaaagaactgtctgttattcgtgat
catgctggaaaagcttgtttgaaagaacttcaccccagcaatagtcctcttgtcatggct
gtctgtggatctaaaggatcatttatcaacatctcgcaaatgattgcttgtgttggtcag
caggccatcagtggtaaacgggtccccaatggttttgaaaaccgatcattgccacacttc
gagcgacattccagaagtcctgcagccaaaggttttgttgggaatagcttttattcaggt
ttaactccaacagaatttttcttccacaccatgggtggccgagaaggtttagtagacacg
gccgtgaaaacagccgaaacaggctacatgcagcgaagacttgtcaagtctttggaagat
ctctgcttacagtatgacaacacagtgagaaactcgaatggtgacattgtccagttcagt
ttcggaggagacggtcttgatccaacttacatggaaggaaacggctgtccagtagaacta
aaaagagtgttagagaatattaccgctatttatccttgtcgtcatgaacctaacttaacc
agtgaagaagttacttttgtcacagatgaaattttaaaatcaaaagaaatggaaagctgc
ggaacagttttcattgaagaactaagaaaattcatgactgattttgtcagcagaacacct
gaatatgaaaaactgaggaaagaaatgaccgttttcaaagaagttcagagactcacaatg
acccaactcgtgaaattcataaaaacttgtagggacaagtacataagagcaaaaatagaa
cctggcactgcggttggtgcattagctgctcaaagtataggagaacctggaactcaaatg
accctcaaaacgtttcacttcgcaggagtagcttccatgaatataacacagggtgtaccc
cgcatcaaagaaataatcaatgccagcaaagtaatcagtactccaatcatcacagcttac
ctcgaagaggacgaagatgaaagctttgccagagcagtcaaagctcgcatcgaaaaaact
acgttaggagatgtgacagagtacatggaggaagtttatctagcgcatgattgttatcta
gtcattaaaatagatacattgagactgaaactgcttcagctggaagttgacattgaatca
atttgtgtcagcatagcgacagcaaaactgaacctgaagcaccatcaaatcaaacctgat
agtgatgctgtcatccacatttatcctgattcattacgaatgagccttgacatgacactc
aaagttttaaaagatcaactgccaaatgtcgtaatttctggtttaccaggtgttaataga
gctgttattcatgaagataattctgccggtaaaacaaaatacaagctattagttgaaggt
gataatctaaaagatgtaatggcaactcgaggtgtaaatggaaaaaaatgtacctccaat
aatacatatcaagtctatgccactttagggattgaagctgcaagatcgaccgtaatgaca
gaaatcgagtcagtgatggaaaaccatggaatgagtattgaccatcgacattcaatgctg
gtagcagatcttatgactagccatggtgaaactctcggtatcacaagacatgggctggca
aaaattaaagaatcagttctgaatcttgcttcatttgaaaaaacagcagatcatcttttt
gatgcggcatactacgggcaaactgatgttattagtggagtgtcagaatccatcatcatg
ggcatccctgtttcaattggtaccggcatcttcaagctacttcataagtctaacaaatct
gaccatctacaacaacggccattacttttcaacaacacaaggtatcatccaactccgtga
DBGET
integrated database retrieval system
