Bemisia tabaci (sweet potato whitefly): 109040771
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Entry
109040771 CDS
T06019
Name
(RefSeq) polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
btab
Bemisia tabaci (sweet potato whitefly)
Pathway
btab03015
mRNA surveillance pathway
btab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109040771
09123 Folding, sorting and degradation
03018 RNA degradation
109040771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btab03019
]
109040771
03041 Spliceosome [BR:
btab03041
]
109040771
Messenger RNA biogenesis [BR:
btab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109040771
mRNA cycle factors
Stress granule specific factors
109040771
Spliceosome [BR:
btab03041
]
Complex C
Other components
Complex C specific factors
109040771
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_7
RRM_Nup35
RBD_DEAH11
RRM_5
RRM_10
RBD_RDR6
RRM_PARP14_3
RRM_8
POP1_C
Motif
Other DBs
NCBI-GeneID:
109040771
NCBI-ProteinID:
XP_018912367
UniProt:
A0A9P0F645
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MNSGPGGPNYPMASLYVGDLHQDVTEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVN
FQQPADAERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDT
FSAFGNILSCKVAQDDTGASKGYGFVHFETEEAANKSIDKVNGMLLNGKKVFVGRFIPHK
EREKELGEKAKLFTNVYVKNFPEDFTDELLKQMFEKYGKITSHKVMFKDDGKSRGFGFVA
FDEPGAAERAVKELNGKEMFENGKPLYVGRAQKKAERQQELKRKFEQLKIERLSRYQGVN
LYVKNLDDTIDDERLRKEFNMFGTITSAKVMMEEGRSKGFGFVCFSSPEEATKAVTDMNG
RIVGTKPLYVALAQRKEDRKAHLASQYMQRIANMRMQQIGPLFQPSSNGYFVPTMQQPPR
FYGPTQMTQIRPQPRWSAQPQVRPNAQSSPGFANMQAPFRSAAARPATAQPAAIRNPMAA
RPITGQQTTMVTARTGPPPVSVSAQARTSGYKYTSNVRNPSQQMPVQQQQVQQAVLIQGQ
EPLTSSMLASANDSDQKQMLGERLFPLIQRMYPELAGKITGMLLEIENAELLHMLVDNES
LKSKVEEAVAVLQAHQAKQAAQVKKE
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaattccggtcctggaggtcctaactacccgatggcgtcgctttacgtcggcgacctt
catcaagatgtcacagaggccatgctctttgaaaaattctccactgcaggacctgtcctg
tcaattcgagtctgcagagacatgatcacccgccgatccttgggttatgcctacgttaac
ttccagcaacctgctgatgctgaacgagctcttgacacaatgaactttgatgccttgaaa
ggacgccctattcgtatcatgtggtcccaacgtgatccctctttgaggaaatctggtgtt
ggaaacgtcttcattaagaaccttgacaaaagtattgacaacaaagccatgtatgacaca
ttctctgccttcggtaacattctcagttgtaaggttgctcaagatgacactggcgcttcc
aaaggatatggttttgtgcactttgaaacagaagaagcagcgaacaagtccattgacaaa
gtcaacggcatgttgttgaacggcaaaaaggtattcgtaggcagattcattcctcacaag
gaacgtgagaaggaacttggtgagaaggctaaactctttaccaacgtatacgtcaaaaac
ttcccagaagatttcacagatgagttgttgaaacaaatgtttgaaaagtacggaaaaata
acaagccacaaagtcatgttcaaagatgatggcaaatctcgtggatttggttttgttgcc
tttgatgagcctggtgccgctgaacgagcagtcaaagaattgaatggcaaagaaatgttt
gaaaatggcaagccattatatgtaggccgtgctcagaagaaagcagagcgtcaacaggaa
ttgaaacgcaaatttgaacaactcaagatcgaacgattgagcagataccaaggagtcaac
ttatacgtcaagaaccttgatgacaccattgatgatgaacgcttgcgcaaagaattcaat
atgtttggaaccattactagcgccaaggttatgatggaagaaggccgaagcaaaggattt
ggatttgtctgtttctcatcacctgaggaagcaaccaaagctgtcactgacatgaacgga
agaattgttggcaccaaacctctgtacgttgctttagcccaaagaaaagaagatcgcaaa
gcccatcttgcctcacagtacatgcaacgtattgctaacatgagaatgcaacaaattggt
ccgctcttccaaccaagcagcaatggttacttcgtacccaccatgcagcaacctcctcgc
ttctatggcccaacccagatgacgcaaattagacctcagccacgttggtcggcacagcca
caagttcgccccaatgctcaatcttcgccaggtttcgcaaacatgcaagctccattccga
tcagcagcagctcggccagccaccgctcaaccagccgcaatccgtaatccaatggcagcc
cgaccgatcacaggtcaacagaccaccatggtcactgctcgcactggaccaccacccgtc
tcagtgtccgcccaggctcgcacatcaggatacaaatacacctcaaacgtgcgcaatcca
tcacagcaaatgccagttcaacaacaacaagtgcaacaggctgtcctcatccaaggtcaa
gagccgctcacatcatccatgttggcgtctgccaatgattctgaccagaaacaaatgttg
ggtgaaaggttgttccctcttattcagcgcatgtatcctgaattggctggtaagatcact
ggtatgttgttggaaattgagaatgctgaattacttcacatgttggtggacaatgaatct
ctcaaatccaaggtcgaagaggcagtggctgtattgcaagcccatcaagccaagcaagca
gctcaagttaagaaggagtaa
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integrated database retrieval system
