KEGG   Bemisia tabaci (sweet potato whitefly): 109042156
Entry
109042156         CDS       T06019                                 
Name
(RefSeq) ATP-dependent RNA helicase WM6
  KO
K12812  ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
Organism
btab  Bemisia tabaci (sweet potato whitefly)
Pathway
btab03013  Nucleocytoplasmic transport
btab03015  mRNA surveillance pathway
btab03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:btab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109042156
  09122 Translation
   03013 Nucleocytoplasmic transport
    109042156
   03015 mRNA surveillance pathway
    109042156
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:btab03019]
    109042156
   03041 Spliceosome [BR:btab03041]
    109042156
Enzymes [BR:btab01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     109042156
Messenger RNA biogenesis [BR:btab03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     109042156
Spliceosome [BR:btab03041]
 Complex C
  Other components
   EJC/TREX
    109042156
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    109042156
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 Cas3-like_C_2 Utp25_C P-loop_SecA
Other DBs
NCBI-GeneID: 109042156
NCBI-ProteinID: XP_018914288
UniProt: A0A9P0G480
LinkDB
Position
Unknown
AA seq 425 aa
MADNDDLLDYEDEEQAEPVIADGTTGVQPKKEVKGNYVSIHSSGFRDFLLKPEILRAIVD
CGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEATENHVYVLVMCHT
RELAFQISKEYERFSKYMSQIKVGVFFGGLPIQKDEEVLKTNCPHIVVGTPGRILALIRS
KKLNLKNLKHFILDECDKMLEQLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKKF
MQDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDILEFNQVVIFVKSVTRCMA
LSQLLTEQNFPAVAIHRGMTQDERLKKYQEFKDFQKRILVATNLFGRGMDIERVNIVFNY
DMPEDSDTYLHRVARAGRFGTKGLAITFASDENDAKILNDVQDRFDVNISLLPDEIDLSS
YIEGR
NT seq 1278 nt   +upstreamnt  +downstreamnt
atggcagacaacgacgatcttttagactacgaagatgaagagcaggcagaaccagtgatt
gctgatggaactactggtgttcagccgaaaaaggaagttaagggaaattatgtctctatc
cacagttctggtttccgagattttcttctcaagccggaaatactaagagctattgttgac
tgtggttttgaacatccctctgaagttcaacatgaatgtattcctcaggctgttttgggg
atggatattctgtgccaagcaaagtcaggaatgggtaaaacagctgtctttgtgctagca
acgttacaacagttggaagcaacagaaaatcatgtttatgtgctagtcatgtgtcacaca
agagagttggcattccagatcagcaaggaatacgaaagattctccaagtacatgtctcaa
attaaggtcggagtattctttggcgggttaccgattcaaaaagacgaagaggttttaaaa
actaactgccctcacatagtggttggaacaccaggacggatattggctttgatcaggagc
aagaaattgaatcttaaaaatctgaagcacttcattttagatgagtgcgacaaaatgctt
gaacaactcgacatgcgaagagatgttcaagaaatcttccgaaacacaccacacggcaaa
caagttatgatgttcagtgccacccttagcaaggagattcgtccagtctgcaaaaaattc
atgcaagatcccatggaagtgtacgtagatgatgaagcgaaattgacccttcacggattg
cagcagcattacgtcaagttgaaggaaaatgagaaaaataagaaactttttgaattgtta
gatatccttgaattcaatcaggtggtgatatttgtgaaatccgtaacaaggtgtatggcg
ctctcacagcttctaacggaacagaacttccctgctgtggctattcaccgaggcatgaca
caggacgaacggctgaagaagtatcaagaattcaaagatttccaaaagcgtattctagtt
gcgactaatttgtttggacgaggaatggatattgaacgagtgaatattgtatttaactat
gatatgcctgaagattctgatacctatctacacagagtcgcaagagcagggcgatttggc
accaaaggtttagcaatcacgttcgccagtgatgaaaatgatgccaaaattttgaatgac
gtgcaagaccgattcgatgtaaatatttctctccttcccgatgaaattgatctctcctct
tacattgaaggacggtag

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