Bemisia tabaci (sweet potato whitefly): 109042156
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Entry
109042156 CDS
T06019
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
btab
Bemisia tabaci (sweet potato whitefly)
Pathway
btab03013
Nucleocytoplasmic transport
btab03015
mRNA surveillance pathway
btab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
btab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109042156
09122 Translation
03013 Nucleocytoplasmic transport
109042156
03015 mRNA surveillance pathway
109042156
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btab03019
]
109042156
03041 Spliceosome [BR:
btab03041
]
109042156
Enzymes [BR:
btab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109042156
Messenger RNA biogenesis [BR:
btab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109042156
Spliceosome [BR:
btab03041
]
Complex C
Other components
EJC/TREX
109042156
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
109042156
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Utp25_C
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
109042156
NCBI-ProteinID:
XP_018914288
UniProt:
A0A9P0G480
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MADNDDLLDYEDEEQAEPVIADGTTGVQPKKEVKGNYVSIHSSGFRDFLLKPEILRAIVD
CGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEATENHVYVLVMCHT
RELAFQISKEYERFSKYMSQIKVGVFFGGLPIQKDEEVLKTNCPHIVVGTPGRILALIRS
KKLNLKNLKHFILDECDKMLEQLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKKF
MQDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDILEFNQVVIFVKSVTRCMA
LSQLLTEQNFPAVAIHRGMTQDERLKKYQEFKDFQKRILVATNLFGRGMDIERVNIVFNY
DMPEDSDTYLHRVARAGRFGTKGLAITFASDENDAKILNDVQDRFDVNISLLPDEIDLSS
YIEGR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaacgacgatcttttagactacgaagatgaagagcaggcagaaccagtgatt
gctgatggaactactggtgttcagccgaaaaaggaagttaagggaaattatgtctctatc
cacagttctggtttccgagattttcttctcaagccggaaatactaagagctattgttgac
tgtggttttgaacatccctctgaagttcaacatgaatgtattcctcaggctgttttgggg
atggatattctgtgccaagcaaagtcaggaatgggtaaaacagctgtctttgtgctagca
acgttacaacagttggaagcaacagaaaatcatgtttatgtgctagtcatgtgtcacaca
agagagttggcattccagatcagcaaggaatacgaaagattctccaagtacatgtctcaa
attaaggtcggagtattctttggcgggttaccgattcaaaaagacgaagaggttttaaaa
actaactgccctcacatagtggttggaacaccaggacggatattggctttgatcaggagc
aagaaattgaatcttaaaaatctgaagcacttcattttagatgagtgcgacaaaatgctt
gaacaactcgacatgcgaagagatgttcaagaaatcttccgaaacacaccacacggcaaa
caagttatgatgttcagtgccacccttagcaaggagattcgtccagtctgcaaaaaattc
atgcaagatcccatggaagtgtacgtagatgatgaagcgaaattgacccttcacggattg
cagcagcattacgtcaagttgaaggaaaatgagaaaaataagaaactttttgaattgtta
gatatccttgaattcaatcaggtggtgatatttgtgaaatccgtaacaaggtgtatggcg
ctctcacagcttctaacggaacagaacttccctgctgtggctattcaccgaggcatgaca
caggacgaacggctgaagaagtatcaagaattcaaagatttccaaaagcgtattctagtt
gcgactaatttgtttggacgaggaatggatattgaacgagtgaatattgtatttaactat
gatatgcctgaagattctgatacctatctacacagagtcgcaagagcagggcgatttggc
accaaaggtttagcaatcacgttcgccagtgatgaaaatgatgccaaaattttgaatgac
gtgcaagaccgattcgatgtaaatatttctctccttcccgatgaaattgatctctcctct
tacattgaaggacggtag
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integrated database retrieval system