Bemisia tabaci (sweet potato whitefly): 109042743
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Entry
109042743 CDS
T06019
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43 isoform X1
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
btab
Bemisia tabaci (sweet potato whitefly)
Brite
KEGG Orthology (KO) [BR:
btab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
btab03041
]
109042743
Enzymes [BR:
btab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109042743
Spliceosome [BR:
btab03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
109042743
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
ResIII
MOEP19
KH_Vigilin
CMS1
Cas3-like_C_2
KH_2
Motif
Other DBs
NCBI-GeneID:
109042743
NCBI-ProteinID:
XP_018915203
LinkDB
All DBs
Position
Unknown
AA seq
762 aa
AA seq
DB search
MLLLQKSSCPRCFAFSGLLQNPVKQSELLLLKDILLFIQLLKFTGDSFQMGDLDEWGCET
TPRDYQSSSYNDSNDRGGRRDRDGFSRGRGGGSRGRGDGSRGRGDGFRGRGDGFRGRGRD
GDRGGRNRQQDSSNDGGWRQQANISRNDRDNGNFSRRSTESGGDYKVIPVSSTQVGSVIG
RSGSKINDLQFESGARIQVSREPNPDTTTDVTIRGTPEQVAKATELINSLLDSLDNRTNS
KDMVDKIHMASMLTQSDEVINWDKIYEADAIAKEKKLASLPPIKKNFYHELPSVTNMSPA
EAAKIRKEQNDISVGFVFEDTGEPIPNPVRTFEEAFHDFPEILDEIHKQNFTKPSPIQCQ
AWPVLLQGRDLIGIAQTGTGKTLAFLLPAFIHIDNQPVPREERVGPSAIVLAPTRELALQ
IDKEVNKYSYKGIRSVCVYGGGSRKDQINVVNKGVEIVIATPGRLNDLAMAGVINFNSVT
FLILDEADRMLDMGFEPQIRKTLLDIRPDRQTVMTSATWPDGVRRLASSYMKDPVQVNVG
SLNLAATHSVTQIIEICDESEKEDLLLQFLANMGPEDKVIVFVGKKARADAISADISLKG
VDCQCIHGDREQADREQALEDLKTGYVRILIATDVASRGLDIADITHVFNYDFPRNIEEY
VHRVGRTGRAGKRGESISLFTRSDWAVAEELIGILTEAEQNVPEELYAMSDRFTKKKERD
RIEGGRGGGRGGGRGGRGGGGGRGGRRGGRDRDGCDFGYMYY
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgctgctcttgcaaaaatcatcttgcccgcgttgttttgctttttccggcctactacaa
aatcctgtcaagcaaagtgagttattgttactcaaggacattcttctcttcattcagctc
ttgaaattcacaggtgattcttttcagatgggtgatttggatgagtggggctgcgagact
acgcctcgagattaccaaagttccagttataatgactccaatgatcgtggcggaagaagg
gatcgtgatggtttcagcagaggcagaggcggtggatccagaggtagaggcgatgggtcc
agaggcagaggtgatggattcagaggtagaggtgacggattcagaggcagaggtcgtgac
ggtgacagaggtggtaggaatcgccaacaggactcctcaaacgatggtggctggcgtcaa
caagctaatattagtaggaatgatagggacaatggaaatttcagtcggcgttcgaccgaa
agtggaggagattacaaggtgatacctgttagttccacacaggttgggtcagtcattggc
cgatctggcagtaaaattaatgacctccagtttgaatctggtgcccggatacaggtcagt
cgagaacctaaccctgacacaacaacagatgtgacaatacgaggcacacctgaacaagtt
gcaaaagcaacagagctgataaattctttgctggacagtttagataaccgtactaattcc
aaggatatggtagacaaaattcacatggctagcatgctgactcaatcagatgaggtcatc
aactgggacaaaatctatgaagcagatgccatagcaaaggagaaaaagttagcctctcta
ccccctatcaaaaagaatttttaccacgaacttccaagtgttactaatatgtctcctgct
gaagcagcaaaaattcggaaggagcaaaacgacatctcagttggttttgtttttgaagac
acaggtgaaccgattcccaatccagtcagaacttttgaagaggcgttccatgattttcct
gaaattctagacgagattcacaagcaaaattttacaaagccatcgccaatccagtgtcaa
gcatggcctgttttacttcaaggaagagatttaattggtatcgctcaaactggaacaggc
aaaaccttagcttttctgttgccagcttttattcacattgataatcaacctgtgccgagg
gaggaacgtgttgggcccagtgcaattgtcctagctccaaccagagaacttgcattacag
atcgataaagaagtgaacaaatatagctataaaggaattagatctgtgtgtgtatatgga
ggcggtagccgcaaagatcaaatcaatgtagttaacaagggtgtagaaattgttatagca
acaccaggacgattaaatgacttggccatggctggtgtgattaattttaactcggtaaca
ttcctaattctggatgaagcagataggatgcttgacatgggttttgaaccacagatccgg
aagacactgttagatatccgtccagatcgtcagactgtgatgacaagcgctacttggcca
gatggtgtgcgccgtctagccagctcctacatgaaggaccccgtgcaagtcaacgttggc
tctcttaaccttgcagctacacactccgtaacacagataattgaaatctgtgacgaatct
gaaaaagaggatctactccttcagtttttggctaacatgggaccagaagataaagtaatt
gtttttgttggcaaaaaagcacgggctgatgccatatcagctgacataagtctgaaagga
gtagactgccaatgtattcatggagaccgagagcaggctgatcgtgaacaagcgctggaa
gatctcaaaacaggctatgttaggatcctcattgcaacagatgtagctagtcgaggtctt
gacatcgctgatattacgcatgtttttaactatgatttccctcgaaatattgaagagtat
gtgcaccgagtagggcgaactggtcgtgctggcaaacggggcgagtcaatctctcttttc
actcgcagtgattgggcagttgctgaggaactcatcggcatcctaactgaagctgaacag
aatgtacctgaagaattgtacgccatgtcggatcgtttcacaaagaagaaagaacgtgat
aggattgaaggcggccgaggtggaggtcgcggcggaggtcgtggtggtcgcggaggtgga
ggtggcagaggcggccggcgaggtggccgcgatcgagatggctgtgattttggatacatg
tattactaa
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