Bemisia tabaci (sweet potato whitefly): 109043103
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Entry
109043103 CDS
T06019
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
btab
Bemisia tabaci (sweet potato whitefly)
Pathway
btab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
btab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109043103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
btab03041
]
109043103
Spliceosome [BR:
btab03041
]
Complex C
Other components
Step II factors
109043103
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_RFWD3
Beta-prop_WDR41
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_ACSF4
Beta-prop_VPS8
eIF2A
Beta-prop_NOL10_N
PQQ_2
Beta-prop_LRRK2
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
109043103
NCBI-ProteinID:
XP_018915708
UniProt:
A0A9P0A296
LinkDB
All DBs
Position
Unknown
AA seq
570 aa
AA seq
DB search
MLNILQYGSDSDEESTEKVEEKAKTIFEEATLHLKEPVSTSMQLCAAPEVVPTKAIEPYR
YIDPTTKEMTYNLKYEELFAPEVGPENPFLTQQQRAPKNMLSGYVEQAHISDFQFENQRR
TFTSYGFALNPTVDAGDNDDGKQMVQNTAILTEPKTVFEKTKKRPLDKRKKEKNDDPSDI
DGFLGPWACFKDEKRVMKPNEEEAEELEEYLAKKQKRGKQTDDKPIEEKTILHIKDSTDY
QGRSFLHPPQDVGVNLRSDAPPDRCFLPKAHIHTWQGHTKGISAIRWFPKSAHLLLSCSM
DCRVKLWEVYNERRCVRTYYGHRQAVRDICFNNPGTQFLSAGYDRYIKLWDTETGECISR
FTSRKIAYCVKFNPDDDKQDLFVAGTSDKKIICWDTRSGEIVQEYDRHLGAVNSITFVDE
NRRFVTTSDDKSLRVWEWDIPVDMKYIADPSMHSMPAVTLSPNQKWLACQSMDNKIVIFS
ALNRFKLNRKKTFTGHMVAGYACNLDFSPDMSYIVSGDADGKCYVWDWKTTKLFKKWKAH
DAVCIAALWHPHEPSKVVTAGWDGLLKYWD
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatattttgcagtatggaagtgacagtgacgaggagtcgaccgaaaaggtcgag
gaaaaagcaaaaactatttttgaggaggccactcttcatctcaaagaaccagtatcaaca
tcgatgcagctatgtgcagctcctgaagttgtacccacgaaagcaattgagccttataga
tacattgatcccactactaaagagatgacttataacttaaagtatgaagagttatttgcg
cctgaagttgggccggaaaacccattcctgacccagcaacaaagagcccccaagaacatg
ctgtcaggttatgttgaacaagctcatatcagtgattttcagtttgaaaatcaaagaagg
acttttacaagttatggatttgcattgaatcccacagttgatgctggagacaacgatgat
gggaaacaaatggtacaaaatacagcaatcctgacagagccgaagactgtgtttgaaaag
actaaaaagagaccattagacaaaaggaaaaaagagaagaatgatgatccgtcagacatt
gatggatttttaggcccttgggcgtgctttaaagatgaaaagcgagttatgaagcccaac
gaggaggaagcagaagagctagaagaatacttggctaaaaaacagaaaagagggaaacaa
acggatgacaaacccattgaagaaaaaactattttgcacatcaaagattcaacggattat
caaggaaggtcatttctgcacccaccgcaagatgtcggtgttaaccttagatcagatgct
ccgcctgacagatgctttctgccgaaggctcacattcacacgtggcagggtcatactaaa
ggaatttctgcgattcgatggtttcctaaatctgcgcacttactgctctcttgtagcatg
gattgtagagtcaagttatgggaggtatacaatgaacgtcgctgtgtgcgaacatactat
gggcatcggcaagcagttcgagatatatgtttcaacaatccaggaacacaatttttatct
gcaggatatgataggtacataaaactatgggacactgaaactggagagtgtatatccaga
ttcacaagtagaaagattgcttactgtgtgaagttcaacccagatgatgataagcaagat
ctttttgtggcaggaacatcagataaaaagattatttgttgggacactcgtagtggtgaa
attgtccaagaatacgaccggcaccttggagctgtaaattccatcacttttgttgacgaa
aatcgcagatttgtaacaacttccgatgacaagagtttgcgagtttgggaatgggacatt
cctgttgatatgaaatacattgctgatcccagtatgcactctatgccagctgtgacttta
tctccaaatcaaaaatggttagcgtgtcaaagtatggacaacaaaatagtcattttctct
gctctgaatcgcttcaagctgaatcggaaaaaaacattcaccgggcatatggttgctgga
tatgcttgtaaccttgacttttcaccagatatgagttacattgtatctggagatgctgat
ggaaagtgctatgtttgggactggaaaacaacaaaactattcaaaaaatggaaagctcat
gatgcggtctgtattgccgctctatggcatccacacgagccaagcaaagtggtgacggct
ggctgggatggtcttctcaaatactgggactaa
DBGET
integrated database retrieval system