Bemisia tabaci (sweet potato whitefly): 109043421
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Entry
109043421 CDS
T06019
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
btab
Bemisia tabaci (sweet potato whitefly)
Pathway
btab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
btab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109043421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
btab03041
]
109043421
03009 Ribosome biogenesis [BR:
btab03009
]
109043421
Enzymes [BR:
btab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109043421
Spliceosome [BR:
btab03041
]
Complex A
U1 snRNP components
U1 related factors
109043421
Complex B
109043421
Ribosome biogenesis [BR:
btab03009
]
Eukaryotic type
Pre-60S particles
Helicases
109043421
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF2608
PRAI
HpcH_HpaI
Motif
Other DBs
NCBI-GeneID:
109043421
NCBI-ProteinID:
XP_018916161
LinkDB
All DBs
Position
Unknown
AA seq
722 aa
AA seq
DB search
MMKYRNNYENPNRNGAMYRGPNDQQQYPKRTWINQNGFNGVEFGGPTFKKNFNNKGPMMK
GSFPGQTLKKPIWDLSALPPFPKNFYQPALTVANRSDQEVESYRQCKEITVKGNNIPKPS
QFFSEQSFPESVMREIMKQGFAEPTAIQAQGWPIALSGRNLVGIAQTGSGKTLAYMLPAA
VHISHQPKISRGDGPIALILAPTRELAQQIQSVAREFGNLRHTCLFGGTPKGPQAKDLER
GVEIVIATPGRLLDFLEHGTFNLSRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVL
MWSATWPKEVRQLAEEYLDDYIQINIGSLELSANHNIKQVVEVIQDYEKEERLISLLKEI
GKNGPYKAIVFVETKKKVDDIVKVIKRDGIVAIGIHGDKSQQERDFVLNEFRSGKAAVLV
ATDVAARGLDVEDVKYVINFDYPNSSEDYIHRIGRTGRCEQSGTAYTFFTPDNQRQAKEL
IAVLQEANQQIDPKLMELASNSRGNLSGRNRWNNRNRPEMNGENNYKPWMNKMQNGPGGP
FNKFNGQGNNWSNGPQYQNPRYNNGQQVPQRYNQNQRTPNQMYPKTYQNGNGYNNSYQNS
GNQPGYQGGFGGGYNSNGYQRNSSQGYANGNYQPRQSYNRKNNSNYGNGGDMYSLPPPSA
SSYSVQSNDDSVNSLVNHKFFQPNRPPPMNACGFQSSYNHPQFAAPMSYPQYTFSQPQAV
QQ
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaatataggaacaactacgaaaaccccaaccgaaacggagccatgtatcgcgga
ccaaatgaccaacaacaataccctaaaagaacatggatcaaccagaatggctttaatgga
gtagaatttggcggaccaactttcaagaaaaatttcaacaacaaaggacccatgatgaag
ggctcatttccaggacagacattgaaaaaaccgatctgggatttatctgcccttcccccc
tttcctaagaacttctatcaaccagcattgactgttgccaacagatctgatcaagaagta
gaaagttacaggcagtgcaaagaaatcactgttaaaggtaacaacattcccaagccgagt
cagtttttctcggaacaaagtttccctgaatctgtcatgcgagaaatcatgaagcagggt
tttgctgagccaacagctattcaagcacaaggttggcccattgcgctcagcggaaggaat
cttgttggaattgctcagacaggttctggcaagactttggcgtacatgttgcctgctgct
gttcacatcagccatcaacctaagatttctcgtggggatggacccatagcacttatcttg
gcaccaacaagagaattagctcagcaaattcagtctgtggccagagagttcggaaacctc
cggcacacttgcttgtttggtggaacccccaaagggccgcaggcaaaggatttagagaga
ggtgttgagattgttatcgctacaccaggaagattattggacttcttggagcacggtaca
ttcaacctcagcaggtgcacctacttggtccttgatgaagctgacagaatgcttgatatg
ggttttgagccccagattcgcaagatcattgaacaaataaggcctgaccgtcaagttctg
atgtggtcagcaacttggccaaaagaagtccgtcagttggctgaagaatacctggacgac
tacatccaaatcaacattgggtccttagaattatctgctaaccacaacatcaagcaagtt
gtcgaagtaatccaagattatgaaaaggaagaaagacttatcagtcttctgaaagaaatc
ggcaagaatggcccctacaaagcaatcgtttttgtggagacaaagaagaaagtcgatgat
atcgtgaaggtcatcaagcgtgacggaattgttgctattggtattcacggtgataaatcc
cagcaagaacgtgacttcgtcttgaatgaattccgaagtgggaaagcagccgtactggtt
gctactgatgtcgcagccagaggtcttgatgttgaagatgtcaagtatgtcatcaacttc
gactaccctaactcgtcagaagactacattcataggattggcagaaccgggcgctgtgag
cagagtggaacagcatacactttcttcactcctgataaccaacgccaggctaaagagctc
atcgctgtgctccaagaagccaatcaacaaatagacccaaaattaatggaactggccagt
aactcgcggggcaacctttccggccgcaacagatggaacaaccgcaaccgacctgaaatg
aacggcgaaaacaactacaaaccctggatgaacaagatgcaaaacggaccaggaggtcct
ttcaacaaattcaacggccaaggaaataactggagtaatggaccccaataccaaaaccca
aggtacaacaacggtcaacaagtcccacagcgctacaaccaaaatcaaaggactccaaat
cagatgtacccgaagacgtaccaaaacggcaacggatacaacaattcatatcagaattct
ggcaatcaacctggttatcagggcggttttggtggtggatacaactccaacggctaccag
agaaacagctctcaaggatatgcaaatggaaactaccaacctaggcagtcatacaatcgc
aaaaacaactcgaactacggaaatggtggtgacatgtactcgttgccccctccatctgca
tcatcttactcggtgcaatccaacgatgactcagtcaattccctggtgaaccacaaattt
ttccaacccaaccgtccacccccaatgaatgcatgtggattccaaagtagctacaaccac
ccacagttcgctgcgcccatgtcgtaccctcagtataccttcagccaaccgcaagcagtt
cagcagtga
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