Bemisia tabaci (sweet potato whitefly): 109043973
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Entry
109043973 CDS
T06019
Name
(RefSeq) ATP-dependent RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
btab
Bemisia tabaci (sweet potato whitefly)
Pathway
btab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109043973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btab03019
]
109043973
03012 Translation factors [BR:
btab03012
]
109043973
Enzymes [BR:
btab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109043973
Messenger RNA biogenesis [BR:
btab03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
109043973
Translation factors [BR:
btab03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
109043973
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_C
HA2_N
AAA_22
nSTAND3
ATPase
Cas3-like_C_2
AAA_19
AAA_16
NACHT
PhoH
AAA_23
NB-ARC
ABC_tran
Motif
Other DBs
NCBI-GeneID:
109043973
NCBI-ProteinID:
XP_018916930
LinkDB
All DBs
Position
Unknown
AA seq
994 aa
AA seq
DB search
MMRRGGRFRAALRQNKHVNDIISQNRARVKHEGDHTLFAYSEEAHSSQTDAYQIASLGTG
PSQPTDQNRKSKIKPPSGLRGKELGLWFRDRNREKQAKERESRKKNDLIYPVKLDATVAS
EICSVLDRQKIDLVQAVSSCGSKNQNDSDARVRYRHIKESDFKRRYLNNITGSIEENICK
SLSTNVVLKRDPQLDDAYHSELISKQQSKKYNSMLEFRKKLPAYQMRHQLIELIRSNQIV
VISGETGCGKTTQVGQFILDDCIESGNGSVTHIVCTQPRRISAITVADRVADERAESVGT
GSVGYQIRLEAKKPRSRGSILFCTTGILTQFLESDPALKHISHLVLDEIHERDTISDFAI
TILKDVIPKRQDLKLILMSATLNAENFSTYFNHCPIITIPGFTYPVREYYLEDILQMTGI
SMTFKKKSRREIEIADLIRSTCSNKYSPFVMRQILDPQSEELNIDLIFDVLQYICNNEKT
EGAVLVFLPGIVQITALHRMLTDSEQFPSSRAQIHVLHSMIPTHTQKAAFQKPPKFVRKI
ILATNIAETSITIDDVVFVIDAGKIKMSNFDVEKNIATLKAEWVSQANAHQRRGRAGRVQ
EGVCYHLFTRARSMTLDQYPLPEMLRTRLEEVILSAKLLQVGDVATFLKKVMNPPNSRAV
ELSVELLEKLGALDSYENLTPLGFHLAKLPMDPQTGKMILMGAIFCCIDPIFTIAASLSF
KDAFYTPIGKEKMVDEKKMELAKGMKSDHLLLAEAMRGWEDAEKRGRGWQFCNEFFLSRP
ILVQLKEMKAQFAEHLSQIGFLDCNDMKASAANINANNYALIRSIICAGLYPNVAILRDL
KPMKSGHCLQFIRTPEQENVKHHPKSVNEKQSEFESRFLVYHQKIQSTAIFLHDTSMVYP
LSLLFFGGGFEFKSDGEGGTVIEINDELKFHCDNKTADLIKELKLRLDMLLEYKSSHPGV
TDWTQNSNEGAILRAITCLLTSEDQFVLRKLASS
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgatgagaagaggaggtagattccgagccgccctcaggcagaacaaacatgtaaatgac
attatttctcaaaacagggccagagttaaacatgagggtgatcatacactgttcgcctat
tcagaggaagcacattcatctcaaacggacgcataccagatagcctcccttggaactggt
ccctctcaacctactgatcaaaataggaaaagtaaaatcaaacctccctctggactaagg
gggaaagaactcgggctttggtttagagatcgtaacagggaaaaacaggcgaaagaaaga
gagagccgtaaaaagaatgatctgatatatcctgtgaaattggacgcaacagtagcatca
gaaatttgctctgttttggacagacaaaaaattgatcttgtgcaagcagtcagctcatgt
ggaagcaagaatcaaaatgattccgacgccagagttcgatatagacacatcaaggaaagt
gatttcaagaggaggtatctgaataatatcactggttcaatagaagaaaatatttgtaaa
agtctgtctacaaatgtggtattgaaaagggatccacaactagatgacgcgtatcactct
gagcttataagtaagcagcagtctaaaaagtataattcaatgttggaatttcggaaaaaa
ttgccagcataccaaatgcggcatcagctaattgaattaatcagaagcaaccagattgtt
gttataagcggagaaacaggttgtggtaaaacaacacaagttggccaatttattttagat
gactgtattgagtctggaaatggctccgtcactcacattgtttgtacacaaccacgaaga
atcagtgcaatcacagttgctgatcgagtggctgatgaacgagcagagtcagttggcact
ggaagtgtaggatatcaaattcgattagaagcgaagaaacctcggtcgagagggtcaata
ttgttttgcacaacaggaattttaactcagtttttagagagtgatcccgcactgaaacac
atttcgcatcttgttctggatgaaattcatgaacgagatacaatatcagactttgcaatc
accatattgaaagatgttatcccaaaaagacaggacctgaaattgattttaatgagcgct
accctgaatgctgaaaacttctcaacgtatttcaaccattgtcctatcatcaccattcct
ggcttcacgtatccagttagagaatactatttggaggatattcttcaaatgacagggatc
agtatgacattcaagaaaaaatcgaggagggaaattgaaatagctgatttaataaggagc
acgtgttcgaacaagtattctccttttgttatgagacaaatcttggatcctcagtcagaa
gaattgaatattgatctaatcttcgatgtactacagtatatttgtaacaatgaaaaaact
gaaggagcagtacttgtatttttacctggaattgtacaaattacagccctccatcgaatg
cttacagactctgaacagtttccatcatcaagagctcaaatccatgttttgcattccatg
atcccaacacatactcagaaagctgcattccagaaaccacctaagtttgttagaaaaatt
atccttgcaaccaacattgctgagacctctatcacgattgatgatgttgtttttgtcatt
gatgccggaaaaattaaaatgagtaattttgacgttgaaaaaaatattgctaccctgaaa
gctgagtgggtaagccaagcaaatgcccaccaaaggcggggccgagctggtcgagtgcaa
gaaggtgtttgctatcacctttttacaagagctaggtcaatgaccctggatcagtaccct
cttccagagatgttgcgtactaggttggaagaagtcattctcagcgccaagttattgcaa
gtcggagacgttgcaacgtttctgaaaaaagttatgaatcctccaaacagtcgtgccgtt
gaattgtcagttgagcttttagaaaaattaggagcattggatagttatgaaaatctaact
cctcttggattccatttagcaaagcttccaatggatcctcaaactggaaaaatgattctc
atgggtgccatattttgctgcattgatcccatcttcaccattgctgcaagtttgagtttc
aaagatgcattttatactccgatcggcaaagaaaagatggttgatgagaagaaaatggaa
ttggccaaaggaatgaaaagtgatcatttgttactagcagaagcaatgagaggctgggag
gatgcagagaaaaggggtcgaggctggcaattctgtaatgagttcttcctgtcccgtcca
attttagttcagctgaaagaaatgaaagcccagttcgcagaacatttatctcagattgga
ttcttggactgtaacgatatgaaagcctcagctgcaaacataaatgctaataattatgcc
ttgatcagatccataatttgtgctggactctatccaaatgttgcaattcttagggatttg
aagcccatgaaatccggccattgtctacaatttatccgaactccagagcaagaaaatgta
aagcatcatcccaaatcagtgaatgaaaaacagagtgaatttgagtctcgatttttagta
tatcatcagaagattcaaagcacagccatattcctacacgatacatcaatggtgtaccct
ctgtctttgctgttttttggtggtgggtttgaatttaaatccgatggagagggtggaact
gttatcgagattaacgacgagctgaaatttcactgtgataataaaacagctgatctcatt
aaggaattgaaattgcggttagatatgctcctagaatacaaatcctcacatcctggagtc
acagactggactcaaaactcaaacgaaggcgccatattaagagctataacctgtttatta
acttctgaagatcaatttgtcttaaggaagttagcaagtagttaa
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