KEGG   Bemisia tabaci (sweet potato whitefly): 109044165
Entry
109044165         CDS       T06019                                 
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
btab  Bemisia tabaci (sweet potato whitefly)
Pathway
btab03030  DNA replication
btab03410  Base excision repair
btab03420  Nucleotide excision repair
btab03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:btab00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    109044165
   03410 Base excision repair
    109044165
   03420 Nucleotide excision repair
    109044165
   03430 Mismatch repair
    109044165
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:btab03032]
    109044165
   03036 Chromosome and associated proteins [BR:btab03036]
    109044165
   03400 DNA repair and recombination proteins [BR:btab03400]
    109044165
DNA replication proteins [BR:btab03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    109044165
  DNA Replication Termination Factors
   ELG1-RFC complex
    109044165
Chromosome and associated proteins [BR:btab03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    109044165
DNA repair and recombination proteins [BR:btab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     109044165
  Check point factors
   HRAD17(Rad24)-RFC complex
    109044165
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_14 AAA_22 AAA_assoc_2 AAA_11 ResIII RuvB_N DEAD DUF815 AAA_16 AAA_24 AAA_5 AAA_7 AAA_30 AAA_19 RCF1-5-like_lid PhoH Mg_chelatase AAA_2 AAA_3 Thioredoxin_6 ATPase_2 bpMoxR Glyco_hydro_57 SNF2-rel_dom
Other DBs
NCBI-GeneID: 109044165
NCBI-ProteinID: XP_018917277
UniProt: A0A9P0AJG8
LinkDB
Position
Unknown
AA seq 329 aa
MVVPKPEVNLPWVEKYRPKKLDELISHDDIIKTINRFMDQNQLPHLLFYGPPGTGKTSTI
LACAKQIYQPSQFKSMVLELNASDDRGINIVRTQILNFASTKTIFKSGYKLIILDEADAM
TNDAQNALRRIIEKFTDNVRFCMICNYLSKIIPALQSRCTRFRFGPLDAKQIMPRLDHVI
QEEKVEATDDGKAALIELAGGDMRKVLNVLQSAASAFPVVNEDAVYSCCGHPLKNDIFEV
LKWLLNDPFSSAYQKIQELKIRKGLALQDILTDVHKFLHKIDLPHKTITELLIKISDIEY
RLAGGTSEKLQVSALVSAFVLARHKLEVN
NT seq 990 nt   +upstreamnt  +downstreamnt
atggtggttcccaagccagaagtaaatctaccgtgggtggagaagtaccgtccaaaaaaa
cttgatgaacttatctctcatgatgacattatcaaaaccatcaacagatttatggatcaa
aatcagctgcctcatttactattctatggacctcctggaactggtaaaactagtacaatc
cttgcatgcgctaaacaaatttaccaaccaagtcaatttaaatctatggttttggaattg
aatgcctctgatgatcgtggtatcaacattgtgcggacccagattttaaactttgcgtca
acaaaaaccattttcaaatctggctataaattgataattcttgatgaagctgatgcaatg
acaaacgatgctcaaaatgctttgcggaggatcatcgaaaagttcactgataatgttaga
ttttgtatgatttgcaactacctgagcaaaatcatcccagcactccaatctagatgcaca
aggtttcgtttcggacccctggatgcaaagcaaatcatgcctcgcttggaccatgttatt
caagaagaaaaggttgaagcgacggatgatgggaaagcggcccttatagaattggctgga
ggtgatatgagaaaagttttgaatgtcttgcaaagtgcagcgtctgcctttccagtagtc
aatgaagatgcagtgtactcttgctgtggacatcccttgaaaaatgatatttttgaagtt
ctcaaatggctcctaaacgatcccttctcctctgcataccaaaaaattcaagaactgaag
attcggaaaggattagctctgcaggatatcctcactgatgttcacaagttccttcataaa
attgatttgcctcacaaaaccatcacagagctgttaataaaaatatctgatattgaatat
agactagcaggagggacaagtgaaaagctgcaggtcagtgccctcgtttctgcttttgtg
ctggcacgacacaaacttgaggtgaattag

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