Budorcas taxicolor (takin): 128043774
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Entry
128043774 CDS
T08909
Symbol
COL3A1
Name
(RefSeq) collagen alpha-1(III) chain
KO
K19720
collagen type III alpha
Organism
btax
Budorcas taxicolor (takin)
Pathway
btax04611
Platelet activation
btax04820
Cytoskeleton in muscle cells
btax04926
Relaxin signaling pathway
btax04933
AGE-RAGE signaling pathway in diabetic complications
btax04974
Protein digestion and absorption
btax05146
Amoebiasis
btax05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
btax00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128043774 (COL3A1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
128043774 (COL3A1)
09152 Endocrine system
04926 Relaxin signaling pathway
128043774 (COL3A1)
09154 Digestive system
04974 Protein digestion and absorption
128043774 (COL3A1)
09160 Human Diseases
09174 Infectious disease: parasitic
05146 Amoebiasis
128043774 (COL3A1)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
128043774 (COL3A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
128043774 (COL3A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
btax00536
]
128043774 (COL3A1)
Glycosaminoglycan binding proteins [BR:
btax00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
128043774 (COL3A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
128043774
NCBI-ProteinID:
XP_052492138
LinkDB
All DBs
Position
2:complement(51632225..51672359)
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AA seq
1467 aa
AA seq
DB search
MMSFVQKGTWLLFALLHPTVILAQQEAVDGGCSHLGQAYADRDVWKPEPCQICVCDSGSV
LCDDIICDDQELDCPNPEIPFGECCAVCPQPPTAPTRPPNGQGPQGPKGDPGPPGIPGRN
GDPGPPGSPGSPGSPGPPGICESCPTGGQNYSPQYEAYDVKSGVAGGVGLAGYPGPAGPP
GPPGPPGTSGHPGAPGAPGYQGPPGEPGQAGPAGPPGPPGAIGPSGPAGKDGESGRPGRP
GERGLPGPPGMKGPAGMPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGIPGENGAPGPM
GPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSP
GSSGAPGQRGEPGPQGHAGAPGPPGPPGSNGSPGGKGEMGPAGIPGAPGLLGARGPPGPP
GTNGAPGQRGAAGEPGKNGAKGDPGPRGERGEAGSPGIAGPKGEDGKDGSPGEPGANGLP
GAAGERGVPGFRGPAGANGLPGEKGPPGERGGPGPAGPRGVAGEPGRDGLPGGPGLRGIP
GSPGGPGSDGKPGPPGSQGETGRPGPPGSPGPRGQPGVMGFPGPKGNDGAPGKNGERGGP
GGPGPQGPAGKNGETGPQGPPGPTGPSGDKGDTGPPGPQGLQGLPGTSGPPGENGKPGEP
GPKGEAGAPGIPGGKGDSGAPGERGPPGAGGPPGPRGGAGPPGPEGGKGAAGPPGPPGSA
GTPGLQGMPGERGGPGGPGPKGDKGEPGTSGVDGAPGKDGPRGPTGPIGPPGPAGQPGDK
GEGGAPGVPGIAGPRGGPGERGEPGPPGPAGFPGAPGQNGEPGAKGERGAPGEKGEGGPP
GAAGPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGGRGLPGPPGNNGNPGPPGSSGAP
GKDGPPGPPGSNGAPGSPGISGPKGDAGQPGERGAPGPQGPPGAPGPLGIAGVTGARGLA
GPPGMPGARGSPGPQGIKGENGKPGPSGQNGERGPPGPQGLPGLAGAAGEPGRDGNPGSD
GLPGRDGAPGTKGDRGENGSPGAPGAPGHPGPPGPVGPAGKNGDRGETGPAGPSGAPGPA
GSRGAPGPQGPRGDKGETGERGANGIKGHRGFPGNPGPPGSPGPAGHQGAVGSPGPAGPR
GPVGPSGPPGKDGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGQPGPPGPPGAPGPCCGA
GGVAAISGIGGEKAGGFAPYYGDEPIDFKINTDEIMTSLKSVNGQIESLISPDGSRKNPA
RNCRDLKFCHPELQSGEYWVDPNQGCKLDAIKVYCNMETGETCISASPLTIPRKNWWTDS
GAEKKHVWFGESMEGGFQFSYGNPELPEDVLDVQLAFLRLLSSRASQNITYHCKNSIAYM
DHASGNVKKALRLMGSNEGEFKAEGNSKFTYTVLEDGCTKHTGEWGKTVFQYQTRKAVRL
PIVDIAPYDIGGPDQEFGADIGPVCFL
NT seq
4404 nt
NT seq
+upstream
nt +downstream
nt
atgatgagctttgtgcaaaaggggacctggttacttttcgctctgcttcatcccactgtt
attttggcacaacaggaagctgttgacggaggatgctcccatctcggtcaggcctatgca
gatagagatgtatggaaaccagaaccgtgccaaatatgcgtctgtgactcaggatccgtt
ctctgtgatgacataatatgtgacgaccaagaattagactgccccaaccctgaaatcccg
tttggagaatgttgtgcagtttgcccacagcctccaacagctcccactcgccctcctaat
ggtcaaggacctcaaggccccaagggagatccaggtcctcctggtattcctgggcgaaat
ggtgatcctggtcctccaggatcaccaggttccccaggttctcccggccctcctggaatc
tgtgaatcatgtcctactggtggccagaactattctccccagtacgaagcatacgatgtc
aagtctggagtagcaggaggagtaggactcgcaggctatcctgggccagctggtcctcct
ggcccacccggaccccctggcacatctggtcatcctggtgcccctggcgctccaggatac
caaggtccccccggtgaacctgggcaagctggtcctgcaggtcctccaggacctcctggt
gctataggtccatctggccctgctggaaaagatggggaatcaggaagacccggacgacct
ggagagcgaggattacctggtcctcctggtatgaaaggcccagctggtatgcccggattt
cctggtatgaaaggacatagaggctttgatggacgaaatggagagaaaggagaaactggt
gctcctggattaaagggggaaaatggcattccaggtgaaaatggagctcctggacccatg
ggtccaagaggagctcctggtgagagaggacggccaggacttcctggagccgcaggggct
cgtggtaatgatggagctcgaggaagtgatggacaaccgggcccccctggtccccctgga
actgcaggattccctggttcccctggtgctaagggtgaagttggacctgcaggatctcct
ggttcaagcggtgcccctggacaaagaggagaacctggacctcagggacatgctggtgct
ccaggtccccctgggcctcctgggagtaatggtagtcctggtggcaaaggtgaaatgggt
cctgctggcattcctggagctcctgggctgttaggagctcgtggtcctccagggccacct
ggcaccaatggtgctcctgggcaacgaggtgctgcaggtgaacccggtaagaatggagcc
aaaggagatccaggaccacgtggggaacggggagaagctggttctccaggtatcgcagga
cctaagggtgaagatggcaaagatggttctcctggagaacctggtgcaaacggacttcct
ggagctgcaggagaaaggggtgtgcctggattccgaggacctgctggagcaaatggcctt
ccaggagaaaagggtcctcctggggagcgtggtggcccaggccccgcagggcccagagga
gttgctggagagcctggacgagatggcctccctggaggtccaggattgaggggtattccc
ggtagccccggaggaccaggcagtgatgggaaaccagggcctcccggaagccaaggagag
actggtcgacctggtcctccaggttctcctggtccgcgaggtcagcctggcgtcatgggc
tttcctggtcccaaaggaaatgatggtgctcctggaaaaaatggagaacgaggtggccct
ggaggtcctggccctcagggtcctgctggaaagaatggtgagactggacctcagggtcct
ccaggacctactgggccttctggtgacaaaggagacacaggaccccctggtccacaagga
ctacaaggcttgcctggaacaagtggtcctccaggagaaaatggaaaacctggtgaacct
ggtccaaagggtgaggctggtgcacctggaattccaggaggcaagggtgattctggtgct
cccggtgaacgtggacctcctggagcaggagggccccctggacctagaggtggagctggc
ccccctggtcctgaaggaggaaagggtgctgctggtccccctgggccacctggttctgct
ggtacacctggtctgcaaggaatgcctggagaaagagggggtcctggaggccctggccca
aagggtgacaagggtgagcctggcacttcaggtgtcgatggtgctccagggaaagatggt
ccaaggggtcccactggtcccattggtcctcctggtccagctggtcagcctggagataag
ggtgaaggtggtgcccctggagttccaggtatagctggtcctcgcggtggccctggtgag
agaggcgaaccggggccaccaggacctgctggcttccctggtgctcctggccagaatggt
gagcctggtgctaaaggagaaagaggggctcctggtgagaaaggtgaaggaggccctcct
ggagccgcaggaccccctggaggttctgggcctgctggtcccccgggcccccaaggtgtc
aaaggtgaacgtggcagtcctggtggtcctggtgctgctggcttccccggtggtcgtggt
cttcctggtcctcctggcaataatgggaacccaggccccccaggctccagcggggctcca
ggcaaagatggtcccccaggtccacctggtagtaatggtgctcctggcagccctgggatc
tctggaccaaagggtgatgctggtcaaccaggtgagaggggagcacctggcccccagggc
cctccgggagctccaggcccactcggaattgcaggagttactggagcacgaggtcttgca
ggcccaccaggcatgccaggtgctaggggcagccccggcccacagggcatcaagggtgaa
aatggtaaaccaggacctagtggtcaaaacggagaacgtggtcctcctggcccccagggt
cttcctggtctggctggtgcagctggtgaacctggaagagatggaaaccctggatcagat
ggtctgccaggccgagatggagctccaggtaccaagggtgaccgtggtgagaacggctct
cctggtgcccctggagctcctggtcacccaggccctcctggtcctgtcggtccagctgga
aagaacggtgacagaggagaaactggccctgctggtccttctggggccccaggtcctgct
ggatcaagaggtgctcctggtccccaaggcccacgtggtgacaaaggtgaaactggtgag
cgtggtgctaacggcatcaaaggacatcgcggattccctggcaacccagggccccccgga
tctccaggtcccgctggtcaccaaggtgcagtcggcagtccaggccctgcaggccccaga
ggacctgttggacccagtgggccccctggcaaggatggaacaagtggacaccctggtccc
attggaccaccggggcctcgaggtaacagaggtgaaagaggatctgagggctccccaggc
cacccaggacaaccaggccctcctggacctcctggtgcccctggtccatgttgtggtgct
ggcggggttgctgccatctctggcattggaggagaaaaagctggtgggtttgccccatat
tatggagatgaaccgatagatttcaaaatcaacaccgatgagattatgacctcactcaaa
tcagtcaatggacaaatagaaagcctcattagtcccgacggttcccgtaaaaaccctgct
cggaactgcagagacctgaaattctgccatcctgaactccagagtggagaatattgggtg
gatcctaaccaaggttgcaaattggatgccattaaagtctactgtaacatggaaactggg
gaaacgtgcataagcgccagtcctttgactatcccacggaagaactggtggacagattct
ggtgctgagaagaaacatgtttggtttggagaatccatggagggtggttttcagtttagc
tatggcaatcctgaacttcccgaagatgtcctcgatgtccagctggcgttcctccgactt
ctctccagccgggcctctcagaacatcacatatcactgcaagaatagcattgcatacatg
gatcatgccagtgggaatgtaaagaaagccttaaggctgatgggatcaaatgaaggtgaa
ttcaaggctgaaggaaatagcaaattcacatacacagttctggaggatggttgcacaaaa
cacactggggaatggggcaaaacagtcttccagtatcaaacacgcaaggccgtcagacta
cctattgtagatattgcaccctatgatattggtggtcctgatcaagaatttggtgcggac
attggccctgtttgctttttataa
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integrated database retrieval system