Budorcas taxicolor (takin): 128043832
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Entry
128043832 CDS
T08909
Symbol
TRIM56
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM56
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
btax
Budorcas taxicolor (takin)
Brite
KEGG Orthology (KO) [BR:
btax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
btax04121
]
128043832 (TRIM56)
Enzymes [BR:
btax01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128043832 (TRIM56)
Ubiquitin system [BR:
btax04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128043832 (TRIM56)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-C3HC4_4
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
128043832
NCBI-ProteinID:
XP_052492200
LinkDB
All DBs
Position
2:7359082..7361346
Genome browser
AA seq
754 aa
AA seq
DB search
MVSQGSSPSLLEALSSDFLACKICLEQLQVPKTLPCLHTYCQDCLAQLAEGGRLRCPECR
ESVPLPPAGVVAFKTNFFVNGLLDLVKARAGGDLRAGKPACALCPLMGGASAGGPATARC
LDCADDLCQACADGHRCTRQTHSHRVVDLVGYRAGWYDEEARERQAAQCPQHPGEALRFL
CQPCSQLLCRECRLDPHLDHPCLPLAEAVRARRPGLEELLAGVDTNLAELEATRLAEKEA
LARLREQASKVVTQVEEAAERVLRALLAQKQEVLGQLRAHVEAAEEAARERLGELEGREQ
VAREAAAFARRVLSLGREAEILSLEGAIAQRLRQLQGCPWVPGPTPCQLPQLELHPGLLD
KNCHLLRLSFEEQQPQDSEKDGAQSQGGDATQPQSRDGVQTPDQDRAQTPQEDEAQPLKA
ERAETPEEDGAKTPKEGRAQTPQEDGGTQARGGGRSNKKRKFKGRLKSISREPSPAPGPN
LEGSGLLPRPIFFCTFPTRMPGDKRAPRITGLCPFGSREILVADEQNRALKRFSLNGDYR
GAVPVPEGCSPCSVAALQDAVAFSAAARLYLINHNGEVQWRRALSLCQASHAVAAMPSGD
RVAVSVSGHVEVYNMEGSLATRFIPGGKANRGLRALVFLTTSPQGHFVGSDWQQNSLVVC
DGLGQVVGEYRGPGLHGCQPGSVSVDKKGYIFLTLREVNKVVILDPKGSLLGDFLTAYHG
LEKPRVTTMVDGRYLVVSLSNGTIHVFRVRPLDS
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggtttcccagggctcctcaccatccctcctggaggccctgagcagcgacttcctggcc
tgtaaaatctgcctggagcaactgcaggtgcccaaaacgctgccctgcctgcacacctac
tgccaggactgcctggcacagctggccgagggcggccgcctccgatgccctgagtgccgc
gagtctgtgcccctgccgcccgcgggcgtggtcgccttcaagaccaacttctttgtcaac
ggactcctggatttggtgaaggcccgggccggtggcgacctgcgggcagggaagccagcc
tgtgccctgtgccccctgatggggggcgccagtgccgggggcccagccactgcccgctgc
ctggactgcgccgatgacctgtgccaggcctgtgccgacggacaccggtgcacccgacag
acccacagccatcgggtggtggacctggtgggctatagggccgggtggtacgatgaggag
gcccgggagcgccaggcagcccagtgtccccagcacccaggggaggccctgcgcttcctg
tgccagccgtgctcgcagctgttgtgccgagagtgtcgcctggacccccacctggaccac
ccctgcctgcccctggctgaggctgtgcgcgcccggaggcccggcctcgaggagctgctg
gccggcgtggacaccaacctggccgagctggaggccacccggctggccgaaaaggaagcc
ttggcccggctgcgggagcaggcgtccaaggtggtcacgcaggtggaggaggcggccgag
cgagttctcagggccctcctggcccagaagcaggaggtgctcgggcaactgcgggcccac
gtggaggctgccgaggaggctgctcgggagcgcctgggggagctggagggccgggagcaa
gtggccagggaggccgccgcctttgcccgtcgggtgcttagcctggggcgcgaggctgag
atcctctcgctggagggggcgatcgcccagcggctccggcaactgcagggctgtccctgg
gtgcctgggcccactccctgccagctgccgcagctggaactgcatcctgggctcctggac
aagaactgccacctgctgaggctctcctttgaggagcagcagccacaggacagcgagaag
gatggagcccaaagccagggaggtgatgcaacccagccccagagcagggatggagttcag
acccccgaccaggacagagcgcagacaccccaagaggacgaagcccagcccctcaaggcg
gagagagccgagactcccgaggaagatggagccaagaccccgaaagagggcagagcccag
acaccccaggaagatggaggaacccaggcccgggggggcggaaggtccaacaagaagagg
aagttcaaaggcaggctcaagtccatctcccgggagcccagccctgcccccgggccaaac
ctggagggctccggcctcctccccaggcccatctttttctgcaccttccccacccggatg
cccggggacaagcgtgccccccgcatcactgggctctgtccctttggctcccgggagatc
ctggtggcggatgagcagaacagggccctaaaacgcttctctctgaatggcgactacagg
ggcgcggtgcctgtgcccgagggctgctccccatgcagtgtggccgccctgcaggatgcc
gtggcattctcagcggccgcgcggctctatctcatcaaccacaatggcgaggtgcagtgg
cgccgggcgctgagcctctgccaggccagccacgctgtggctgccatgccgagcggggac
cgggtggcggtcagcgtgtccggacacgtggaggtgtacaacatggaaggcagcttggcc
acgcggttcatccctgggggcaaggccaaccggggcctgcgggcactggtgttcctgacc
accagcccccagggccattttgtagggtccgattggcagcagaatagcttggtggtctgt
gatgggctgggtcaggtggttggggaataccggggacccggtctgcatggctgccagccg
ggctccgtgtccgtggataagaaaggctacatctttctgacccttcgtgaggtcaacaag
gtagtgatccttgatccgaagggctcgctgcttggcgacttcctgacggcctatcacggc
ctggaaaagccccgggtgaccaccatggtggacggcaggtacctggtcgtgtccctcagt
aacgggaccatccacgtctttcgggtccgccctcttgacagttaa
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