Budorcas taxicolor (takin): 128044991
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Entry
128044991 CDS
T08909
Symbol
SMG5
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG5
KO
K11125
protein SMG5
Organism
btax
Budorcas taxicolor (takin)
Pathway
btax03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
btax00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128044991 (SMG5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btax03019
]
128044991 (SMG5)
03032 DNA replication proteins [BR:
btax03032
]
128044991 (SMG5)
Messenger RNA biogenesis [BR:
btax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
128044991 (SMG5)
mRNA cycle factors
Common to processing body (P body) and stress granule
128044991 (SMG5)
DNA replication proteins [BR:
btax03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
128044991 (SMG5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Motif
Other DBs
NCBI-GeneID:
128044991
NCBI-ProteinID:
XP_052493382
LinkDB
All DBs
Position
3:14949548..14976609
Genome browser
AA seq
1016 aa
AA seq
DB search
MSQGPPTGESSEPEAKVLHTKRLYRAVVEAVHRLDLILCNKTAYQEVFKPENISLRNKLR
ELCVKLMFLHPVDYGRKAEELLWRKVYYEVIQLIKTNKKHIHSRSTLECAYRTHLVAGIG
FYQHLLLYIQSHYQLELQCCIDWTHVTDPLIGCKKPVSASGKEMDWAQMACHRCLVYLGD
LSRYQNELAGVDTELLAERFYYQALSVAPQIGMPFNQLGTLAGSKYYNVEAMYCYLRCIQ
SEVSFEGAYGNLKRLYDKAAKMYHQLKKCETRKLSPSKKRCKDIKRLLVNFMYLQSLLQP
KSSSVDSELTSLCQSVLEDFNLCLFYLPSSPNLSLASEDEEEYESGYAFLPDLLIFQMVI
ICLMGVHSLKRAGSKQYSAAIAFTLALFSHLVNHVNIRLQAELEEGENPVPAFQSDGADE
LESKEPLEKEEEPGPEPPPVVPPEGEVRKSRKFSRLSCLRRRRHPPKAGDDSDLSEGFDS
DSSHDSARASEGSDSGSDKSLEGGGTAFDAETDSEMNSQESRSDLEDMEDEDGTRSPALE
PSRARSEAPESLNGPLGPSEASIASNLQAMSTQMFQTKRCFRLAPTFSNLLLQPTTEAAA
SASLRRCVNGDVDRPSEPASEEGSESEGSESSGRSFRNERSIQEKLQVLMAEGLLPAVKV
FLDWLRTNPDLIIVCAQSSQSLWNRLSVLLNLLPAAGELQESGLALCAEVQELLEGCELP
DLPSSLLLPEDTALRNLPPLRAAHRRFSFDTARLLLSTLEETVVRICCIRSFGHFVARLQ
GSILQFNAEVGIFVSTAQSEQESLLQQAQAQFRMAQEEARRNRLMRDMAQLRLQLEVSQL
EGSLQQPKAQSAMSPYLVPDTQALCHHLPVIRQLATSGRFIVIIPRTVIDGLDLLKKEHP
GARDGIRYLEAEFKKGNRYIRCQREAGKSFERHKLKRQDADAWTLYKILDSCKQLTLAQG
AGEEDPSGMVTIITGLPLDNPSTLSGPMQAALQAAAHASVDIKNVLDFYKQWKEIG
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaggcccccccacaggggagagcagcgagcccgaagcaaaggtcctccacact
aagcggctttaccgggctgtggtggaggctgtgcatcgacttgacctcatcctttgcaac
aaaaccgcttatcaagaagtgttcaaaccggagaacattagcctgaggaacaagctgcgt
gagctctgcgtcaagcttatgttcctgcacccggtggactatgggaggaaggctgaggag
ctactgtggagaaaggtatactacgaagttatccagcttatcaagactaacaaaaagcat
atccacagccggagtaccttggaatgtgcctacaggactcacctggttgctgggataggc
ttctaccagcatctccttctctacatccagtctcactaccagctggaactgcagtgctgc
atcgactggacccacgtcaccgaccccctcataggatgcaagaagccagtgtctgcctca
gggaaggagatggattgggcacagatggcatgccaccgatgtctagtgtacctgggggat
ttgtcacggtatcagaatgaactagctggcgtagacactgagctgctagctgagagattt
tactaccaagccctgtcagtagctcctcagattggaatgcccttcaaccagctgggcacc
cttgcaggcagcaagtactacaatgtggaagccatgtattgctacctgcgctgcattcag
tcggaagtgtcctttgagggggcctatggaaacctcaagcggctgtatgacaaggcagcg
aaaatgtaccaccagctgaagaagtgtgagactcggaaactctctcccagcaagaagcga
tgtaaagacattaagaggttgctggtgaactttatgtatctgcaaagcctcctgcagccc
aaaagcagctccgtggactcagagctgacgtccctttgccagtcagtcctggaggacttc
aacctctgtctcttctacctgccctcctcacccaacctcagcctggccagtgaggatgag
gaggagtatgagagtggatatgctttcctcccggaccttctcatctttcagatggtcatc
atctgccttatgggggtgcacagcttgaagagagcagggtccaagcagtacagtgcagcc
atcgccttcaccctggccctcttctcccacctcgtcaatcacgtcaacatccggctgcaa
gctgagctggaagagggcgagaatcccgtcccggcattccagagtgacggcgcagatgaa
ctggagtccaaggaacccttggagaaggaggaggagccgggtcctgagccgcctcctgta
gtacctccagagggtgaggtcagaaagagtcggaagttctcccgcctctcctgcctccgc
cgccgccgccacccgcccaaagcaggtgatgacagtgacctgagtgaaggctttgactcg
gactcaagccatgactcggcccgggccagtgagggctcagacagtggctccgacaagagt
cttgaaggtggaggaacagcttttgacgctgagacagattcagaaatgaacagtcaggag
tcccgatcagacctggaagatatggaggatgaggacgggacacggtccccagccctggag
ccatctcgggccaggtcagaggctcctgaatccctcaatggccctctgggccccagcgag
gccagcattgccagcaatctacaagccatgtccacccagatgttccagaccaaacgctgc
ttccgactggcccccaccttcagcaacctgctcctccagcccaccaccgaagcagccgcc
tcggccagcctcaggcgctgtgtcaacggggatgtggacaggccttcagagccagcctct
gaagagggctcggagtcggagggaagcgagtccagtgggcgctcctttcggaatgagcgg
agcatccaggagaagctgcaggtcttgatggccgaaggcctgctccctgccgtgaaagtc
ttcctggactggctgcggaccaaccccgacctcatcattgtgtgtgcgcagagctctcaa
agtctgtggaaccgcctgtctgtgttgctgaacctgttgccagctgctggcgaactccaa
gaatctggcctggccctgtgtgctgaggtccaggagcttcttgaaggttgtgaactgcct
gacctcccatctagcctgctgctcccagaggacacggcacttcgcaacctgcctcccctc
cgggcggcccacagacgctttagctttgatacagctcggctcttgctcagcaccttagag
gagacagtcgtgcggatatgctgcatacgcagctttggccacttcgttgcccgcctgcaa
ggcagtatactgcagttcaacgcagaggtcggcatctttgtcagcaccgcccagtctgag
caggagagcctgctgcagcaggcccaggcccagttccgcatggcacaggaggaagctcgg
cggaacaggctgatgagagacatggcccagctacgacttcagcttgaggtctctcagctg
gaagggagcctgcagcagcccaaggcacagtcagcaatgtctccctacctcgtccccgac
acccaggccctctgccaccacctccctgtcatccgtcagctggccaccagtggccgcttc
atcgtcatcatcccaaggacagtgatcgatggcctggatttgctgaagaaggaacaccca
ggggcccgggatgggatccgatatctggaggcagagtttaaaaaagggaacaggtacatt
cgctgccagagagaggcagggaagagcttcgagcggcataagctgaagaggcaggatgcc
gatgcctggacactctataagatcctggacagctgcaaacagctgactctggcccagggg
gcaggtgaggaggacccgagcggcatggtgaccatcatcacaggccttccactggataac
cctagcacgctctcaggccctatgcaggcagccttgcaggccgctgcacatgccagtgtg
gacatcaagaatgttctggacttctacaagcagtggaaggagattggctga
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