KEGG   Budorcas taxicolor (takin): 128046292
Entry
128046292         CDS       T08909                                 
Symbol
VPS41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
  KO
K20184  vacuolar protein sorting-associated protein 41
Organism
btax  Budorcas taxicolor (takin)
Pathway
btax04140  Autophagy - animal
btax04142  Lysosome biogenesis
btax04148  Efferocytosis
btax05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:btax00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    128046292 (VPS41)
   04140 Autophagy - animal
    128046292 (VPS41)
   04148 Efferocytosis
    128046292 (VPS41)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    128046292 (VPS41)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:btax04131]
    128046292 (VPS41)
Membrane trafficking [BR:btax04131]
 Endosome - Lysosome transport
  Tethering complex
   Hops complex
    128046292 (VPS41)
SSDB
Motif
Pfam: TPR_Vps41 Beta-prop_Vps41 zf-RING_Vps41 Clathrin VPS18_solenoid_2nd zf_RING_Vps8_fungal WD40_CDC20-Fz WD40_Prp19 ANAPC4_WD40 Beta-prop_THOC3 Beta-prop_HPS5 WD40_WDHD1_1st Beta-prop_EML_2 Vps39_1 TPR_PEP5_VPS11 Beta-prop_RIG_2nd zf-RING_5 TPR_YpiA Beta-prop_IFT122_1st zf_RING_Vps8 RIG-I_C CFAP251_N CofB_pilin_dom Beta-prop_ACSF4 zf-RING_11
Other DBs
NCBI-GeneID: 128046292
NCBI-ProteinID: XP_052494363
LinkDB
Position
4:83866293..84071082
AA seq 854 aa
MAEAEEQETGSLEESTDESEEEESEEEPKLKYERLSNGVTEILQKDAASCMTVHDKFLAL
GTHYGKVYLLDVQGNITQKFDVSPVKINQVSLDESGEHMGVCAEDGKVQVFGLYSGEEFH
ETFDCPIKIIAVHPHFVRSSCKQFVTGGKKLLLFERSWMSRWKSSVLHEGEGNIRSVKWR
GHLIAWANNMGVKIFDITSKQRITNVPRDDISLRPDMYPCSLCWKDNVTLIIGWGTSVKI
CSVKERHASEMRDLPSRYVEIVSQFETEFYISGLAPLCDQLVVLSYVKEVSEKTEREYCA
RPRLDIIQPLSETCEEISSDALTVRGFQENECRDYHLEYSEGESLFYIVSPRDVVVAKER
DQDDHIDWLLEKKKYEEALMAAEISQKNIKRHKILDIGLAYINHLVARGEYDIAARKCQK
ILGKNAALWEYEVYKFKEIGQLKAISPYLPRGDPVLKPLIYEMILHEFLESDYEGFATLI
REWPGDLYNNSVIVQAVRDHLKKDSQNRTLLKTLAELYTYDKNYGNALEIYLTLRHKDVF
QLIHKHNLFSSIKDKIVLLMDFDSEKAVDMLLDNEDKISIKKVVEELEDRPELQHVYLHK
LFKRDHHKGQRYHEKQISLYAEFDRPNLLPFLRDSIHCPLEKALEICQQRNFVEETVYLL
SRMGNSRSALKMIMEELHDVDKAIEFAKEQDDAELWEDLILYSIDKPPFITGLLNNIGTH
VDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLKKMHRTQM
KGILVDEENICESCLSPILPSDAAKPFSMVVFHCRHMFHKECLPVPSMTSPAQFCNICSA
KHRGPGSAILEMKK
NT seq 2565 nt   +upstreamnt  +downstreamnt
atggcggaagcagaggagcaggaaactggatctctggaagaatctacagatgagtctgag
gaagaagagagtgaagaggagccaaaactgaagtacgaaaggctctccaatggggtaact
gaaatccttcagaaggatgctgctagctgcatgacggtccatgacaagttcttggcactg
ggcacacattatggcaaggtttatttacttgatgtccaggggaacatcactcagaagttt
gatgtaagtcctgtgaagataaatcaggttagcctggatgaaagtggagaacacatgggc
gtatgtgcagaggatggcaaggtgcaggtgtttggactgtattctggagaagaatttcat
gagacttttgactgtcccattaaaatcattgctgtgcacccgcatttcgtgagatctagc
tgcaagcagtttgtgacgggagggaagaagttgctgctgtttgaacgatcttggatgagc
agatggaagtcttcagttctgcatgaaggggaagggaacataaggagtgtgaagtggagg
ggccatctgattgcctgggccaataatatgggcgtgaagatttttgacatcacctcaaag
cagagaatcacaaacgtgccccgggatgatataagtcttcgcccagatatgtatccctgt
agcctctgctggaaggacaatgtgacgctgatcattggctgggggacgtctgtcaagata
tgctcggtgaaggaacggcacgccagtgaaatgagggacttgccaagtcgatatgttgaa
atagtgtctcagtttgaaactgaattctatatcagtggactggcacctctctgtgatcag
cttgttgtgctttcctacgtcaaggaggtttctgaaaaaacggaaagagaatactgcgcc
agacccagattggatatcatccagccactttctgagacttgtgaagagatttcttctgat
gctctgaccgtgaggggctttcaggaaaatgaatgtagagattatcacttagagtactcg
gaaggggagtcactcttttacatcgtgagtccaagggatgttgttgtagcgaaggaacga
gaccaagatgaccacatcgactggcttcttgaaaagaagaaatatgaagaagctttgatg
gcagctgaaattagccaaaagaacattaaaagacataagattctggacatcggcttggcg
tatataaaccacctggtggcaagaggagagtatgatatagcagcacgcaaatgccagaaa
attcttgggaaaaatgcagcactctgggaatacgaagtttataaatttaaagaaattgga
cagcttaaggcgattagtccttatttgccaagaggggatccagttctgaaaccactcatc
tatgaaatgatcttacatgaatttttggaaagtgattatgagggttttgccacgttgatc
cgagaatggccgggagatctgtacaacaattcagtaatagttcaagcggttcgggatcac
ctgaagaaagatagtcagaacaggaccttacttaaaaccctggcagaattgtacacctat
gacaaaaactatggcaatgctttggaaatatacctaacattaagacataaggatgttttc
cagttgatccacaaacataatcttttcagttctatcaaggataaaattgttttattaatg
gattttgattctgagaaagctgttgacatgcttctggacaatgaagataaaatttcaatt
aaaaaagtagtggaagaattagaagacagaccagagttgcagcatgtgtatctgcataag
cttttcaaaagagaccatcataagggacagcgctaccacgagaagcagatcagcctttat
gctgaattcgaccgacccaacttgcttccatttctccgagacagtatccattgccccctt
gaaaaggctcttgagatctgtcaacagagaaactttgtagaagagacagtttatcttttg
agccgaatgggtaatagccgaagcgccctgaagatgatcatggaggaattgcatgatgtt
gataaagcgattgaatttgccaaagagcaggacgatgcagaactctgggaagatctgatt
ttatattccatcgacaaaccaccatttatcaccggcttgttaaacaacattggcacgcat
gttgacccgattctactaattcaccgtattaaggaaggaatggagattcctaatttgaga
gactccttagttaaaattctacaagactacaatttacaaattctgcttcgtgaaggctgt
aagaagattctcgtagccgactcactgtccttactaaagaagatgcaccgaactcaaatg
aaaggcattctggttgatgaggagaacatctgtgagtcctgcctttcccctattcttcca
tcagatgcagcaaagcccttcagcatggtggtcttccactgccggcatatgttccacaag
gagtgcctgcccgtgcccagcatgacctctcctgcgcagttctgtaacatctgcagtgcg
aagcaccggggaccaggaagtgccattttggagatgaaaaaatag

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