Budorcas taxicolor (takin): 128046981
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Entry
128046981 CDS
T08909
Symbol
TOPBP1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
btax
Budorcas taxicolor (takin)
Pathway
btax03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
btax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
128046981 (TOPBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
btax03032
]
128046981 (TOPBP1)
03400 DNA repair and recombination proteins [BR:
btax03400
]
128046981 (TOPBP1)
DNA replication proteins [BR:
btax03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
128046981 (TOPBP1)
DNA repair and recombination proteins [BR:
btax03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
128046981 (TOPBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
128046981
NCBI-ProteinID:
XP_052495131
LinkDB
All DBs
Position
1:199728286..199803351
Genome browser
AA seq
1516 aa
AA seq
DB search
MSKNDKEPFFVKFLKSSDNSECFFKALESIKEFQSEEYLQIITEEEALKIKENDRSLYIC
DPFSGDAFDHLQKLGCRIVGPQVVIFCMHHQRCVPRAEHPVYNMVMSDVTVSCTSLEKDR
REEVHKYVQMMGGRVYRDLNISVTHLIAGEVGSKKYLVAANLKKPILLPSWIKTLWEKSQ
EKKIARYTDINMEDFKCPIFLGCIICVTGLCTLDRKSVQQLTVKHGGQYMGQLKMNECTH
LIVQEPKGQKYECAKRWNVHCVTTQWFFDSVEKGFCQDESIYKTEPRSEAKSMPDTSTPT
GQINTIDSRTLSDVSHISNINASCINESICNSVNSKLEPTVENLENLDVSAFQAPEDLLD
GCRIYLCGFNGRKLDKLRRLINSGGGVRFNQLNEDVTHVIVGDDDDELKQFWDKSAHRPH
VVGAKWLLECFSKGYMLPEEPYIRVNYQPMEIPVSDQPESKTALLKRKNSSFSKNDFAPE
EKHEQADEDLLSQYQTNNPTVVEVGLCSDYTHVEPLNDSTHISLQEHQSSIGHCLPDVST
VTEEGLFSQKSFLVLGFGNENESNVAAIIRENAGKIVSLQSRVVADYAVVPLLGCEVQAT
VGEVVTNTWLVTCIDYQTLIDPKSNPLFTPVPVMAGMTPLEDCVLSFSQCVGAEKDSLTF
LANHLGASVQEYFVRKSNAKKGMFASTHLVLKEPGGSKYEAAKKWNLPAVTIAWLLESAR
LGKRANENHFLIENSSKEEQSLETETTNEVNLNPDTPEHPVTHREIQRKTAVTPLDMNRF
QSRAFRMVVSQHSGQASVSPAPGQSLQKEPSLHLDTPSKFLSKDKLFKPSFDVKDALAAL
ETPGGPSQQKRKLSTPLSEVIVKNLKVALANSSRNAVALSASPQLKDAQSEKEDAPKPLQ
KVVVCVSKKLSKKQSELNGIAASLGADYRWSFDETVTHFIYQGRPNDTNREYKSVKERGV
HIVSEHWLLECAQEYKHLPESLYPHTYNPKMSLDISTVQDGRLCNNRLPSAGSPMRDDEP
DHMPIEENDIDNMTTSNKELTTSNGNGRNDSKGALTQTLEMRENFQKQLQEIMSATSIVK
PQGQRTSLSRSGCNSTSSTPDSTRSARSGRSRVLEALRQSRQTVPDINTEPSQNEQIIWD
DPTAREERARLASNLQWPSCPTQYSELQVDVKKLEDSPFQEPLHDSEIAEQAVCDPGNIC
VTGAPKHPISEELETPMKDSQLIPTPQAPSIAFPLANPPVAPHPREKIITIEETHEDLKK
QYIFQLSSLNPQERIDYCHLIEKLGGSVIEKQCFDPSCTHIVVGHPLRNEKYLASVAAGK
WVLHRSYLEACRTAGRFMSEEDYEWGSSSILDVLTGINVQQRKLALAAMRWRKKIQQRQE
SGIIEGAFSGWKVILHVDQSRESGFKRLLQSGGAKVLPGYSVSLFKEATHLFSDLNKQKP
DDSGVNIAEAAAQNVYCLKTEYIADFLMQESPPQVENYCLPEAAAFLQNKKEPGPGFSQK
RKAPTEKNKIKRPRVQ
NT seq
4551 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaaatgacaaagaaccgttttttgtgaagtttttaaagtcttcagacaattct
gaatgtttttttaaagctcttgagtcaataaaagaattccaatcagaagaatatcttcag
attattacagaagaagaggcattgaaaataaaggaaaatgatagatcactgtatatctgt
gacccctttagtggtgatgcctttgatcatctccaaaagcttggttgcagaattgttggt
cctcaagtagtcatattttgtatgcaccaccagcgatgtgtcccaagagctgaacatcca
gtttataacatggttatgtctgatgtaaccgtgtcttgtacaagcctggaaaaagacaga
agggaagaagttcataaatatgtacaaatgatgggtggacgtgtatacagagaccttaac
atatcagtaactcaccttattgcaggagaagttggtagcaaaaaatacttagttgctgca
aacctaaagaaacctattttgcttccttcttggataaaaacactttgggagaagtcgcag
gagaagaaaatagctagatataccgatataaacatggaagacttcaagtgtcctattttt
cttggttgcataatctgtgtgactggcttatgtaccttagacaggaagtcagttcagcag
ctcacagtaaagcatggaggacagtacatgggacagttgaaaatgaatgagtgtacacac
ctcattgtgcaagaaccaaaaggtcaaaaatatgaatgtgccaagagatggaatgtacac
tgtgtgaccacgcaatggttttttgacagtgttgagaaaggtttttgtcaggatgaatcc
atatacaagacagagcctagatcagaagcaaagagtatgcctgatacttcaactcctact
ggccagatcaacacaattgatagtcgtactctttcagatgtcagccatatttccaacatc
aatgcaagctgcataaatgaatcaatatgtaattcagttaatagcaaactggaacctaca
gttgaaaatctggaaaatttggatgtcagtgcatttcaggcacctgaagatttattagat
ggttgtcggatctatctttgtggttttaatggcagaaagctagataaactgagaagactt
attaacagtggaggtggagttcgttttaatcagctcaatgaagatgtaactcatgttatt
gtgggagatgatgatgatgaattgaagcagttttgggataaatcagcccacaggcctcat
gtagtgggagcaaaatggttgctagagtgttttagtaaaggttatatgcttcctgaagag
ccatacatccgtgttaactaccagccaatggaaattccagtttcagatcaacctgaaagt
aaaacagcccttttaaaaaggaagaacagcagcttctctaagaatgactttgctcctgag
gaaaagcatgagcaagctgatgaagatctactctctcaatatcagactaataacccaaca
gtagttgaagttgggctctgcagtgactatactcatgtggagccccttaatgattctact
catatttctctgcaagaacaccagtcttccatcggtcattgcctccctgatgtttctaca
gttaccgaagaaggtttatttagccaaaagagtttcttagttttgggttttggtaatgaa
aatgaatctaatgttgcagccatcataagagaaaatgctggaaaaattgtgtcccttcag
agcagagttgttgctgattatgctgtggttcctctgctggggtgtgaagtacaggcgact
gtgggagaagttgtaacaaacacatggctggtaacttgtatagactaccagactttaatt
gatccaaagtcaaatcctctcttcacaccagttccagttatggcaggaatgactccttta
gaggattgtgttctttcattcagccaatgtgtaggagctgaaaaagactcattgacattc
ttagcaaatcaccttggagccagtgttcaggagtactttgttcgcaagtccaatgcaaag
aaaggcatgtttgccagtacacatcttgttttgaaagagccaggtggttctaaatatgaa
gctgccaagaagtggaatttaccagcagtcactatagcttggctgttggagtctgctaga
ttgggaaagagagcaaatgaaaaccatttcctgattgaaaattcatctaaagaagaacaa
agtttggaaactgaaacaacaaatgaggtgaatctaaatccagatactccagagcatcct
gtaacacatcgggaaattcagaggaaaacagccgtcacacctttagatatgaaccgcttc
cagagtagagctttccgcatggtggtgtcacagcactccggacaggcttcagtctccccg
gccccaggacagtcacttcagaaggagccctcattacacctggatacgccgtcaaagttt
ctgtccaaggacaaactcttcaagccttcctttgatgtgaaggatgcacttgcagccttg
gaaactccaggaggtcccagccagcagaaaaggaaactgagtacaccactctcagaagtc
atcgtcaaaaacctgaaagttgctttggcaaatagctctcgaaatgctgttgctctttct
gccagccctcaactgaaggatgcccagtcagaaaaggaagacgctccgaagccacttcag
aaggtagtggtgtgtgttagtaagaaactcagtaagaagcagagtgaactaaacgggatt
gcagcctctctaggtgcagactacaggtggagttttgatgagacagtgactcatttcatc
tatcaaggacgaccaaatgacactaatcgggagtataaatctgtaaaagaaagaggagta
cacattgtttcagagcactggcttttagaatgtgcccaggagtataaacatcttcctgaa
tctctttatccacatacttataatcccaaaatgagcttggacatcagtacagtgcaagat
ggccgactctgtaataaccgactaccctcagctggctctccaatgagggatgatgagcca
gatcatatgcctatagaagaaaatgatatagacaatatgaccaccagtaataaagaacta
acaacatcaaatggaaatggaaggaatgactctaaaggagctctgacacagactttggag
atgagagagaactttcaaaagcagcttcaggagataatgtctgcaacttcaatagtgaaa
ccccaagggcagaggacttccctctcaagaagtggttgtaacagtacctcttcaactcct
gacagcacccgctctgcccgcagtggacgaagtagagtcctagaggcactgaggcagtct
cgtcaaacagtacctgatatcaacacagagccctcccaaaatgaacagatcatttgggat
gaccctacagccagggaggagagagcaagacttgccagcaatctgcagtggcctagttgt
cccacacaatactctgagcttcaggttgatgttaaaaaattggaggattctcctttccag
gagcctttacatgattcagaaattgctgaacaggctgtttgtgatcccgggaacatatgt
gtgactggagccccaaaacacccgatctctgaagaactggaaactccaatgaaagacagc
caactgatccctacgcctcaagcccccagtattgccttccccctagccaacccacctgtg
gctccacaccctagagaaaagattataacaatagaggagactcatgaagacttaaaaaaa
cagtacatatttcagttgtcatctctgaatcctcaagaacgtattgattattgtcatctg
attgaaaaactaggtggatcagtgattgagaagcagtgctttgatcccagctgtacacac
attgttgtggggcatccacttcgcaacgagaaatatttagcttccgtggcagcaggaaag
tgggtactccatcgctcctaccttgaagcttgcaggactgctgggcgcttcatgtcggaa
gaagactatgagtggggaagtagttccatactcgatgttttgactggaatcaatgtacag
caacgaaaattagcacttgcagcaatgagatggaggaaaaaaatccagcaaagacaagaa
tcaggcattattgagggggcgtttagtgggtggaaagttattttacacgttgatcagtcc
cgagaatcaggattcaaacgcctacttcagtcaggaggagcaaaggtgctgcctggttat
tctgtatctttatttaaagaagctacacatctcttttctgacttaaataaacagaaacca
gatgactcaggagttaatatagcagaagctgctgcccagaatgtatactgcttgaaaaca
gaatacattgctgattttcttatgcaggaatcccctcctcaagtagaaaattactgtctg
ccagaggctgctgcttttcttcagaataaaaaggaacctgggcctggattctcacaaaag
aggaaagctcctacagaaaaaaataaaatcaaacgacccagagtacagtaa
DBGET
integrated database retrieval system
