Budorcas taxicolor (takin): 128048058
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Entry
128048058 CDS
T08909
Symbol
PDZRN4
Name
(RefSeq) PDZ domain-containing RING finger protein 4
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
btax
Budorcas taxicolor (takin)
Brite
KEGG Orthology (KO) [BR:
btax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
btax04121
]
128048058 (PDZRN4)
Enzymes [BR:
btax01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128048058 (PDZRN4)
Ubiquitin system [BR:
btax04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
128048058 (PDZRN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_5
Sina_ZnF
zf-rbx1
zf-RING_16
IBR_1
Sgf11
RING_XB3-XBAT31
zf-RING_6
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
128048058
NCBI-ProteinID:
XP_052496477
LinkDB
All DBs
Position
5:complement(83912762..84329835)
Genome browser
AA seq
1037 aa
AA seq
DB search
MGFALERFAESVDPDFQCRLCGQVLEEPLCTPCGHVFCARCLRPWAARRRRCPLQCGPLA
PGELYRVLPLRSLVQKLRIQCDYRPRGCGRSVQLSELAAHVERCDFGPARRRHPGSVSRP
NGLGSGDRSLRGGCSSAPGIRRGGGGGACGGSPGVRGGSWRGPRPRVWRWREKALLAQLW
ELQGEVRLTARRYQEKLTQYMAHVRNFARDLGGGHDAEGEHKPLTIVLERENDTLGFNII
GGRPNQNNQEETPMEGIYVSKILKNGPADRTDGLEIHDKIIEVNGKDLSKATHEEAVEAF
RNAKEPIVVQVLRRTPLSKPAYGTTPEVRLMNASTQTDITFEHIMALAKLRPPTPPVPDI
CPFLLSDSCHSLHPMEHEFYEDNEYLSSLPADADRTEDFEYEEVELCRVSSQEKLGLTVC
YRTDDEEDTGIYVSKVDPNSIAAKDGRIREGDRILQINGEDVQDREAAVAQLSSDECRRI
LLLVARPESQVDEGWLEDERNELLEELNLAMLEEQHNDAMQRTADEVEQPKKQEEEEGTT
DTATSSSNNHEKDSGVGRTDESLRNDESSEQENATEDPHGTSLKSKRELGQSQDTLGSVE
LQCNESFVSGEYIDSDCIGNQDEECERFRQLLELKCKIRKHGEYDLYYSSSTIECNQGGR
EGVEHELQLLNEELRNIELECQTIMQAHRLQKVTDQYGDIWALHDGGFRSYNTSIDTHRG
KLDDILEHPEKSDKDSSSAYNTAESCRSTPLTVDRSPDSSLPRVISLTNKKNLRSTMAAS
QSSSGQSTKESTCTKAKTSEQGCVIEGKEKTSESSKLSDPEKTSSEHIPYLSPYHSSSYR
YANIPAHARHYQSYMQLIQQRSAVEYAQSQLSLVSVCKESQKCSEPKMEWKVKIRSDGTR
YITKRPVRDRILKERALKIKEERSGMTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRR
REFMMRSRLECLKESPQSGSEGKKEVNIIELSHKKMMKKRNKKILDNWMTIQELMTHGAK
SPDGTQVPNAFLSVTTV
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgggctttgccctggagcgcttcgccgaatcggtggacccagatttccagtgcagattg
tgcggccaggtgctggaggagcccctgtgcacgccgtgcgggcatgtcttctgcgcccgc
tgtctgcggccctgggcggcgcggcggcgccggtgcccgctgcagtgcgggcccctggcg
ccgggcgagctgtaccgggtgctgcctctgcgcagcctcgtccagaagctgcgcatccag
tgcgactaccgcccccgcggctgcggccgctcggtgcagttgagcgagctggcggcgcac
gtcgaacgctgcgacttcggccctgcccgccgccgccacccgggcagcgtttcccggccg
aacggcctgggcagtggggaccggtcactgcgcgggggctgcagctcagcgcccggcatc
cgccgcggcgggggcgggggcgcatgcggggggtcgccgggcgtccgcggcgggagctgg
aggggacccaggcctcgggtctggaggtggcgcgagaaggcgctgctagcgcagctctgg
gagctgcagggcgaggtgcggctcaccgcccgcaggtaccaggagaagttgacccagtac
atggctcacgtccgcaacttcgccagggacctgggtggcggccacgacgcggaaggagaa
cataagccactcactattgtattggaaagagaaaatgacactttgggattcaatattata
ggaggtcgaccaaatcagaataatcaggaagaaacaccaatggaaggaatttatgtttca
aaaattttgaaaaatggacctgctgatagaacagatggcctggaaattcatgacaaaatc
attgaggtcaatgggaaagatctctcaaaggctacccatgaagaggcagtggaagctttt
cgaaatgccaaggagcctatcgtggtccaggtgctaaggcgaacacctctcagtaaacca
gcctatgggacaaccccagaagtgcgactcatgaatgccagcactcagacggacatcacc
tttgaacatataatggccctggccaaacttaggccacccacccctccagtgcccgacatc
tgtccatttctgctctcagacagctgccattctctccatccaatggagcatgaattttat
gaagacaatgagtatctttccagcttgcctgctgatgcagacagaacagaggactttgaa
tatgaggaggtcgagttgtgtcgtgttagcagtcaagagaagctgggtctgacagtctgt
taccgaacggatgatgaagaagacaccggcatttatgtcagcaaggtagatccaaacagc
attgctgccaaagatggccgaattcgagaaggggatcgtattttgcaaataaatggggaa
gacgtccaggatcgcgaggcggcggtggcccagctgtctagcgacgagtgcaggagaatc
ctgctgctggtcgcaaggccagagagtcaggtggatgaaggctggctggaagatgaaagg
aatgaattattagaagagttaaacttggcgatgttggaagaacagcataatgatgcaatg
cagcgcactgccgatgaggtggagcagccaaaaaagcaagaagaagaagagggcacaaca
gacacggcaacatcctcatccaacaaccatgagaaggacagcggagtggggcgcacagac
gaaagcttgaggaatgacgagagctcagagcaggagaatgcaaccgaggatccccacggc
acctctctgaaaagcaaaagagagctggggcagagccaagacactctgggaagcgttgaa
cttcagtgcaatgagagttttgtgtctggtgaatacattgactcagactgtattggcaac
caagatgaggagtgtgaaaggtttcggcagctcctggagctcaaatgcaagataaggaag
cacggggagtatgacctgtattactcaagcagcacaatagaatgcaatcagggaggacga
gagggagtggagcatgaactgcagttgcttaatgaagaactgagaaacattgaacttgag
tgccaaactatcatgcaggctcacaggctccagaaagtgacagaccagtacggagatatc
tgggcattgcatgatggaggattccgaagttataacaccagcatagatacccatagggga
aaactagatgacatccttgaacacccagaaaagtcagacaaagacagctccagtgcttac
aacacagctgaaagttgcagaagcactccactcactgtggaccgttcccctgacagttcc
cttccaagagtgatcagcctcaccaataagaaaaacctgagaagcacaatggcagccagc
cagtcctcttctggccagagcactaaagagtcgacctgcaccaaagccaaaacctctgaa
caaggctgtgtcattgaaggcaaagagaagacttcagaaagcagcaagctttctgatcca
gagaagaccagcagtgaacacatcccttatctctctccttaccacagctcctcctataga
tatgcaaacatcccagcacatgccaggcattatcaaagctacatgcagttaattcaacag
aggtccgcagtcgagtacgctcagagtcagctcagcttggtgagcgtgtgcaaggagtct
cagaagtgctcagaacccaagatggaatggaaggtgaaaatcaggagcgacgggacgcgg
tacatcaccaagagacccgtgcgggaccgcattctaaaggagcgtgccttaaagatcaag
gaggagcggagtggcatgaccacggacgatgacaccatgagcgagatgaagatggggcgg
tactggagcaaagaggagaggaaacaacacttggtgcgggccaaggagcagcggcgccgc
cgagagttcatgatgcggagccggctggagtgtctcaaggagagtccccagagcggcagt
gagggcaagaaagaggtcaacatcattgaactgagtcacaaaaagatgatgaagaaaaga
aacaagaaaattttggacaactggatgacaatccaagaactgatgacccatggggccaag
tcccctgatggtacacaagttcctaatgcctttttgtctgtcaccacagtatga
DBGET
integrated database retrieval system
