Budorcas taxicolor (takin): 128048987
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Entry
128048987 CDS
T08909
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
btax
Budorcas taxicolor (takin)
Pathway
btax03082
ATP-dependent chromatin remodeling
btax04714
Thermogenesis
btax05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
btax00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128048987 (SMARCC2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
128048987 (SMARCC2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
128048987 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
btax03021
]
128048987 (SMARCC2)
03036 Chromosome and associated proteins [BR:
btax03036
]
128048987 (SMARCC2)
Transcription machinery [BR:
btax03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
128048987 (SMARCC2)
Chromosome and associated proteins [BR:
btax03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
128048987 (SMARCC2)
PBAF complex
128048987 (SMARCC2)
GBAF(ncBAF) complex
128048987 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
Motif
Other DBs
NCBI-GeneID:
128048987
NCBI-ProteinID:
XP_052497446
LinkDB
All DBs
Position
5:101624435..101644548
Genome browser
AA seq
1243 aa
AA seq
DB search
MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNSASHVVYP
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQNSASQQMLNFPDKGKEKP
TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
RIEESGTDEARAEGQATEDKKEPKEPREGVGTVEEEAKEKTSEAPKKDDEKGKDGDSEKE
SEKSDGDPTADPEKEKEPKEGQEEVLNEVVESEGERKTKVERDIGEGNLSTAAAAALAAA
AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA
DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPPGAAGPPTVHGLAMA
PASVAPAPAGSGAPPGSLGPSEQLGQAGSTVGPQQQPPAGAPQPGAVPPGVPPPGPHGPS
PFPNQQTPPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPAPSIIPFGSLADSISINLP
PPPNLHGHHHHLPFAPATLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQSP
AIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPPQ
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtgaagtactacgaggccgcggacacc
gtgacccagttcgacaacgtgcggctgtggctcggcaagaactataagaagtatatacaa
gccgaaccacccaccaacaagtccctgtctagcctggttgtacagttgctacaatttcag
gaagaagtttttggcaaacatgtcagcaatgcaccgctcactaaactgccgatcaaatgt
ttcctagatttcaaagcaggaggctccctgtgccacatacttgcagctgcctacaaattc
aagagtgaccagggatggcggcgttacgattttcagaatccatcacgcatggaccgcaac
gtggaaatgttcatgaccattgagaagtccttggtgcagaataattgcctgtctcgacct
aacatttttctgtgcccagaaattgaacccaaactgctagggaaattaaaagacattatc
aagagacatcagggaacagtcactgaggataagaacagtgcctcccacgttgtgtatcct
gttccagggaacctggaggaagaggaatgggtacggccagtcatgaagagggataagcag
gttcttctgcactggggctactatcctgacagttatgacacgtggatcccagccagtgaa
attgaagcgtctgtggaagatgctccaactcctgagaaacctaggaaggttcatgcaaaa
tggatcctggacacagacaccttcaatgaatggatgaatgaggaagactacgaagtaaat
gatgacaaaaaccctgtctcccgccgaaagaagatttcagccaagacgctgacagatgag
gtgaacagcccagattcggaccgacgggacaagaaggggggtaactataagaagaggaag
cgctccccctcaccttcaccgaccccagaagccaagaagaagaatgctaagaaaggtcct
tcaacaccttacaccaagtcaaagcgaggccacagagaggaggagcaagaagacctgaca
aaggacatggatgagccctcaccggtccccaatgtggaagaggtgacattgcccaagaca
gtcaacactaagaaggactcagagtcagccccagtcaaaggaggcaccatgactgacctg
gatgaacaagaggatgaaagcatggagaccacaggcaaggatgaggacgagaacagcaca
ggcaacaagggagaacagaccaagaacccagacctgcatgaggacaatgtgactgagcag
acccaccacatcatcatcccgagctatgctgcctggtttgactacaacagtgttcacgcc
atcgaacggagggctctccctgagttcttcaatggcaagaacaagtccaagactccagaa
atctacctggcctatcggaacttcatgattgatacttaccggctgaacccccaggagtat
ctcacgtccaccgcctgtcgcaggaacctggcgggtgacgtctgtgccatcatgagggtc
catgccttcctagaacagtggggtctcattaactaccaggtggatgctgagagtcgacca
actcccatggggcctccgcccacctctcacttccacgtcttggcagacacaccatctggg
ctggtgccactgcagcccaagaccccgcagggccgccaggttgatgctgataccaaggct
gggcgaaagggcaaagagctggatgacctggtgccagagacggctaagggcaagccagag
ctgcagaactctgcttcccagcaaatgctcaacttccctgacaaaggcaaggagaaaccg
acagacatgcagaatttcggtctgcgcacagacatgtacacgaagaagaacgtcccctcc
aagagcaaagccgcggccagtgccactcgagagtggacggaacaggagaccctgctgctc
ctggaggcactggaaatgtacaaagatgactggaacaaagtgtcagagcacgtgggaagc
cgcacacaggatgaatgcatcttgcattttctccggcttcccatcgaagacccgtacctg
gaggactcagaggcctccctgggccccctggcctaccagcccatccccttcagccagtca
ggcaaccccgtgatgagcaccgttgccttcttggcctctgtcgtcgaccctcgagtggcc
tcagctgctgcgaagtcagccctagaagagttctccaaaatgaaggaagaggtacccaca
gctttggtggaggcccacgttaggaaagtggaagaagccgccaaagtgacaggcaaggca
gacccagcctttggtctggaaagcagtggcatcgcagggaccacctccgatgagccggag
aggatcgaggagagcgggactgatgaggcacgggcggagggccaggccacagaggataag
aaggaacccaaggaacctcgagaaggagttgggacagtggaggaagaagcaaaggagaag
accagtgaggcacccaagaaggacgatgagaaagggaaagatggcgacagcgagaaggag
tcagaaaagagtgatggagacccgacagcggatcctgagaaggagaaggagcccaaggaa
gggcaggaggaggtgctgaacgaagtggtggagtcagagggggagaggaagacgaaggtg
gagcgcgacattggcgagggcaacctctccaccgccgccgccgccgccctggctgctgcc
gccgtgaaggccaagcacttggctgccgttgaggagaggaagatcaaatctctggtggcc
ctgctggtagagacccagatgaaaaagttggaaatcaaactccggcactttgaggagcta
gagacgatcatggaccgggagcgagaagcactggagtaccagaggcagcagctcttggcc
gacagacaagccttccacatggagcagctgaagtacgcagagatgcgggcccggcagcag
cacttccagcagatgcaccaacagcagcagcagccaccaccagccctgcccccaggctcc
cagcctatcccaccaccaggcgctgctgggccacccactgtccacggcttggccatggct
ccagcctctgtggccccggctcctgcgggcagtggggcccctcctggaagcttggggccc
tccgaacagcttgggcaggcagggtcaactgtggggccacagcagcagccaccagctgga
gccccgcagcctggggccgtcccaccaggggtacccccccctggaccccatggcccctca
ccgttccccaaccaacaaactcctccctcaatgatgccaggggcagtgccaggcagcggg
cacccaggcgtggcgggtaatgctcctttgggtttgccttttggcatgccgcctccccct
cctgctccatccatcatcccatttggtagcctagccgactccatcagtattaacctcccc
cctcctcctaacctgcatgggcatcaccaccatctcccgttcgccccggccactctcccc
ccacctaacctgcctgtgtccatggcgaaccctctacatcctaacctgccggcgaccacc
accatgccatcttctttgcctcttgggccggggctcggatccgccgcagcccagagccct
gccattgtggcagctgttcagggcaacctcctgcccagtgccagcccactgccagaccca
ggcacccccctgcctccagaccccacggccccgagcccaggcacagtcacccccgtgcca
cccccacagtga
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integrated database retrieval system
