Budorcas taxicolor (takin): 128051619
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Entry
128051619 CDS
T08909
Symbol
DDX39A
Name
(RefSeq) ATP-dependent RNA helicase DDX39A isoform X1
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
btax
Budorcas taxicolor (takin)
Brite
KEGG Orthology (KO) [BR:
btax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
btax03041
]
128051619 (DDX39A)
Enzymes [BR:
btax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128051619 (DDX39A)
Spliceosome [BR:
btax03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
128051619 (DDX39A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
128051619
NCBI-ProteinID:
XP_052500211
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All DBs
Position
7:11844648..11853240
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AA seq
468 aa
AA seq
DB search
MAEQDVENELLDYEEDEEPQAPPESAPPPPKKDVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCH
TRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKRNCPHVVVGTPGRILALVR
NRSLNLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCM
ALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDENDAKILNDVQDRFEVNVAELPEEIDIS
TYSKWLRQGWGAGVGGQWWGLSSPPPPHWLPPSPVCVSQLSRAGNHMP
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggcggaacaggatgtggaaaacgagcttctggattatgaggaagatgaagagccccag
gcacctccagagagcgctccacctccccccaagaaagacgttaagggttcctatgtttcc
atccacagctctggcttccgggactttctgttgaagccggagctcctgagggccatagtg
gactgtggctttgagcatccatcagaggtccagcacgagtgtattccgcaagccatcctg
ggcatggacatcttgtgccaggccaaatcagggatgggcaagacagcggtttttgtgttg
gccactctgcagcagattgagcccgtcaacggacaggtgacggtcctggtgatgtgccac
actcgagagcttgccttccagatcagcaaggagtatgagcgcttctccaaatacatgccc
agcgtcaaggtgtctgtgttctttgggggcctgtccatcaagaaggatgaggaggtgttg
aagaggaactgtccccacgtggtggtggggacgccgggccggatcctggcacttgtgcgc
aataggagcctcaacctgaagaatgtgaagcacttcgtgttggatgagtgcgacaagatg
ctggagcagctggatatgcggcgggacgtgcaggaaatcttccgcctgaccccccacgag
aagcagtgcatgatgttcagcgccaccttgagcaaggagatccgacccgtgtgcaggaag
ttcatgcaagatcccatggaggtgtttgtggacgacgagaccaagctcacgctgcacggg
ctacagcagtactacgtgaaactcaaggacagtgagaagaaccgcaagctcttcgacctc
ctggatgtgttggagtttaaccaggttgtgatctttgtgaagtcagtgcagcgctgcatg
gccttggcccagctcctggtggaacagaacttcccagctattgccatccacaggggcatg
gctcaggaggagcgcctgtcgcgctatcagcagttcaaggacttccagcggcggatcctg
gtggccaccaatctgttcggccgagggatggacattgagcgcgtcaacatcgtcttcaat
tatgacatgcctgaggactcggacacctacctccaccgtgtggcccgtgcgggtcgcttc
ggtaccaaaggcctggccgttactttcgtgtctgacgagaacgatgccaaaatcctcaat
gatgtccaggaccggtttgaagtgaacgtggcagagcttccagaagaaattgacatctcc
acatacagtaagtggctcagacagggctggggtgccggggtggggggacagtggtggggc
ctatcctcaccgccccctcctcactggcttcccccgtcccccgtgtgtgtctcacagttg
agcagagccggtaaccacatgccctga
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