Budorcas taxicolor (takin): 128053945
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Entry
128053945 CDS
T08909
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
btax
Budorcas taxicolor (takin)
Pathway
btax04140
Autophagy - animal
btax04148
Efferocytosis
btax05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
btax00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128053945 (VPS18)
04148 Efferocytosis
128053945 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128053945 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
btax04131
]
128053945 (VPS18)
Membrane trafficking [BR:
btax04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
128053945 (VPS18)
Hops complex
128053945 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_RING_C
Clathrin
zf-RING_5
zf-C3HC4_2
zf-RING_16
KNOX2
zf-ANAPC11
zf-RING_Vps41
zf-RING_2
zf-RING_UBOX
zf_RING_Vps8
zf-rbx1
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
128053945
NCBI-ProteinID:
XP_052502412
LinkDB
All DBs
Position
10:34912276..34920978
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AA seq
973 aa
AA seq
DB search
MASILDEYEDSLSRSTVLQPGCPSVGIPHSGYVNAQLEKEEPIFTKQRIDFTPSERITSL
VVSCNQLCMSLGKDTLLRIDLGKANEPNHMELGRKDDAKVHKMFLDPTGSHLLIALSSTE
VLYVNRNGQKVRPLARWKGQLVESVGWNKALGTESSTGPILVGTAQGQIFEAELSASEGG
LFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPEGRGFVIATTRQRLFQFIGRVAEGAE
AQGFSGLFAAYADHPPPFREFPSSLGYSELAFYTPKLRSAPRAFAWMMGDGVLYGSLDCG
RPDSLLSEERVWEYPEGVGPGASPPLAIVLTQFHFLLLLADRVEAVCTLTGQVVLRDRFL
EKFGPLKHMAKDPSTGHLWAHSERAVFRYHVQREARDVWRTYLDMNRFDLAKEYCRERPD
CLDTVLAREADFCFRQRRYLESARCYALTQSYFEEIALKFLEARQEEALAEFLQRKLANL
KPAERTQATLLTAWLTELYLSRLGALQGDPDALNLYRETRERFRSFLSSPRHKEWLFASR
ASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLARHRDPQLFYKFSP
VLIRHIPRQLVDAWIEMGSRLDARQLIPALVNYSQGGEAQQVSQAIRYMEFCVNVLGETE
QAIHNYLLSLYARGQPASLLAYLEQAGASPHRVHYDLKYALRLCAEHGHHRACVHVYKVL
ELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVQTAMACLASC
PLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQEL
RGRYGTVEPQDKCATCDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQR
KLGAAPPPAKGSARAKEAEGGAAAGGPSREQLKADLDELVAAECVYCGELMIRSIDRPFI
DPQRYEEEHLSWL
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctatcctggatgaatacgaggactccctgtcccgctcgaccgtcttgcagccc
ggctgccccagcgtgggcatcccccactcgggatatgtgaatgcccagctagagaaggaa
gaacccatcttcacaaagcagcgcattgactttaccccttccgagcgcatcaccagtctt
gttgtctcctgcaatcagctctgcatgagcctcggcaaggatacactactccgcattgac
ttgggcaaagcaaatgaacccaaccacatggagctggggcgcaaggatgatgccaaagtt
cacaagatgttcctggaccccactggctctcatctgctgatcgctctgagcagcactgag
gtcctctatgtgaatcgtaatggacagaaggttcggcccctggcacgctggaaggggcag
ctggtggagagtgtgggctggaataaggccctgggcaccgagagcagcaccggccccatc
ctggtcggcaccgcccaagggcagatcttcgaagcagagctttcggccagcgagggtggg
ctctttggccctgccccggatctctacttccgtccattgtacgtgctaaatgaagaaggg
ggcccagcacctgtgtgctcccttgaggctgagcggggccctgaagggcgcggttttgtc
atcgccaccactcggcagcgcctcttccagttcataggccgagtggcggagggagctgag
gcccagggtttctcggggctctttgctgcctacgctgaccacccacccccattccgtgag
ttccccagcagtctgggctacagcgagctggccttttacacccccaaattgcgctctgcg
ccccgggccttcgcctggatgatgggagatggcgtgttgtatggatcgttggactgtggg
cgtccggactccctgctgagtgaggagcgggtctgggagtacccagagggggtgggcccc
ggggccagcccgcccctggccatcgtcctgacccagttccacttcctgctgctgctggca
gaccgggtggaggcagtgtgcacgctgacggggcaggtggtgctgcgggaccgcttcctg
gagaagttcgggccgctgaagcacatggcgaaggacccctccacgggccacctgtgggcc
cactccgagcgggctgtcttccgctaccacgtacagcgggaggcacgggatgtctggcgc
acctatctagacatgaaccgcttcgacctggccaaggagtattgtcgagagcggcctgac
tgcctggacacagtcctggcccgggaggccgacttctgcttccgccagcgtcgctacctg
gagagcgcccgctgctatgccctgactcagagctactttgaagagattgcccttaagttc
ttggaggcccgacaggaggaggcgctggccgagttcctgcagcgaaaactggctaatttg
aagcctgccgaacgaacccaggcaaccctgctgaccgcctggctgacggagctctacttg
agccggctcggggctctgcagggtgaccccgatgccctgaacctctaccgggaaacccgt
gagcgcttccgctccttcctcagcagccctcgccacaaggagtggctcttcgccagccgg
gcctccatccacgagctcttggccagccacggggacacggagcacatggtgtacttcgct
gtgatcatgcaggactatgagcgcgtggtggcttaccactgccagcatgaggcctacgag
gaggccttggccgtgctggcccgccaccgtgacccccagctcttctacaagttctcgccc
gtcctcatccgtcacatccctcgccagctggtggatgcctggattgagatgggcagccgg
ctggatgcccggcagctcatccctgccctggtgaactatagccaaggtggcgaggcccag
caggtgagccaagccatccgctacatggagttctgcgtgaacgtgctgggcgagactgag
caggccattcacaattacctgctgtcgctctatgcccggggccagccggcctcactgctg
gcctacctggagcaggctggggccagcccgcaccgcgtgcactatgatctcaagtatgcg
ctgcggctctgcgctgagcatggccaccaccgtgcttgtgtccacgtctacaaggtcctg
gagctgtatgaggaggctgtggacttggccctgcaggttgacgtggacctggccaagcag
tgtgctgacctgcctgaggaagacgaggagctgcgcaagaagctgtggctgaagattgca
cggcacgtggtgcaggaggaggaagatgtgcagacagccatggcctgcctggccagctgc
cccctgctcaagattgaagatgtgctgcctttctttcctgactttgtcaccattgaccac
ttcaaggaggccatctgcagctcactgaaggcctacaaccaccacatccaagagctacag
cgagagatggaagaggccacagccagtgcccagcgcatccggagagacctgcaggagctg
cgggggcgctatggtaccgtagagccccaggacaaatgtgctacctgcgacttccccctg
ctcaaccgccccttttacctcttcctctgtggccacatgttccatgctgactgcctgctg
caggccgtgcggcccggcctgccggcctacaagcaggcccggctcgaggagctgcaacga
aagctgggggctgctccaccccctgccaagggctctgcccgggctaaggaggctgagggg
ggcgctgctgctggggggcccagccgggaacagctcaaggctgacctggatgaacttgtg
gccgctgagtgcgtatactgtggggagctgatgatccgctctattgaccggcccttcatc
gacccccagcgctacgaggaggagcacctcagttggttgtag
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