Budorcas taxicolor (takin): 128054463
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Entry
128054463 CDS
T08909
Symbol
SPG11
Name
(RefSeq) spatacsin
KO
K19026
spatacsin
Organism
btax
Budorcas taxicolor (takin)
Pathway
btax05014
Amyotrophic lateral sclerosis
btax05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
btax00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
128054463 (SPG11)
05022 Pathways of neurodegeneration - multiple diseases
128054463 (SPG11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
btax03400
]
128054463 (SPG11)
DNA repair and recombination proteins [BR:
btax03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
128054463 (SPG11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spatacsin_C
Motif
Other DBs
NCBI-GeneID:
128054463
NCBI-ProteinID:
XP_052503051
LinkDB
All DBs
Position
10:complement(100985996..101065606)
Genome browser
AA seq
2421 aa
AA seq
DB search
MAAEERVLPVLLVPVSAEATGRLGPRAQLHREQAALGSLTASGSLRVLPLAPGGRGGGDC
LLEGCFRQFVWEGSHHSGTPNNKPRLVALTGNYELLIYEFNLEGGRCDATVLYSYSEKTL
QKLVEDQNISFSLLSLRILSFHNNTSLLFINKCVVLHVMFAERDAEIRVLSCYTLPLPAQ
AVDRIIDTQLCRGILFVLSSLGWIYIFDIVGGRQVAQVDLALSQEDVCNEQQQEPAKSSS
FTSLKVSQDLDVVVVVGFPNTAVAVNLTLYFRQYPGHLLCEKTLQDIPIEGPEGIDEDDP
VNSDYNMKLTKFSFRIDRSWKAQLSSLNETIQSSKLGGSCCAPWFQDISHLESPESGDRS
TSVSDWAFAPQDVTCSPCNSPQKGPARTIDAGRVWKRMRLREREEPLELTCVSVTGFTAL
FTWAGEGSGWTIVLWDLETQSTQCFLLGKKCIPVDSGGAQQLCLVLTENGLSLILFGLTQ
EEFLNRLMIHGSASTVDSLCHLNGWGRCSIPIHALEAGIENRQLDTVDFFLKSKENLLTP
SSKSSVPDQFDHFASHLYLKHVEELTPALDLLCSAIRENDSETQSKHFSEQLLNLTLSFL
NKQIKELFIHIEELDEHLQKGVDILTSYIDELRTFMIKFPWKLTDAIDEHDVDENVPKVK
ESSIWERLSVEEVIANAILSNKIPEAQTFFRINSHSAQRLEELIRIGLDLVFDNLKKNNI
EEASELLKNMGFNVKDQLLKICFHTTDKSIRDFLVEIFKEKNYFSEKEKRTVEFVLQVEK
FYSGHLQEDIQIRSLPRYWIKEQDFSKHKSVLDSFLKYDHKDNKQDHRIVLNWAQWWNQP
TQESILLPRINPEGYNSYSPEALWRYLTARHDWPSIILWIGEFQTQSSYASLEQNKWPLL
TVDIVDQNTCCNNYMRNEILDKLARNGIFLTSELEDFELFLVRLNHVGGVMQDALAVQNY
RSKEGWDFHSRFILYCLEHSLQHLLYVYLDHYKLSPPNCPFLGKKELHEAHPWFEFLVQC
RQVSSNLTDPRLIFQASLANAQILIPSNQASVSSMLLEGHTLLALATTVYAPGGVSQVVQ
NGETENSLKKVDPQLLKMALTPYPKLKAALFPQYTTASVLPPDITLYHLIQLLLPFDPSR
LFGWQSANTLAIGDAASQLPHFSSPDLVGRYAVVECLNYAYYLRHGRPSFAFGTFLVQEL
TKSKTPKQLIQQVGSEAYGLGLSCFHISSIGAACVCFLELLGLDSLKLRVDMKVANIILN
YKCGSEDAQYNSIRESLAGKLSRLAVGERAATEELLVLLEEGMWTSIQRQEAQRLSSGSS
SQWALVAQFCRLHNMKPSTSYLRECARANDWLQFIIHSQLHSHHPEEVQYLLQHFSPVLQ
DHLRLAFENLPSVSNSRMDSDQVCSTSSQELQRHKEETTNFFQLLLQCSEVPGSWCWLLR
EAVRQKAPVLSVLASCLQDASAVSCLCVWIIASVEPRIATEAGGPLQDSVEGHVWGLEDL
SVIWRTLLTRQKIRTLIRGFQLFFKDSPLLLMMEIYELCMFFKNYKEAEAKLVEFQQSLE
TLETAATRVPAAIPAPWLKEHVCFLLKLMLQQCGTQYELGRLLQLFVGIEHLFSDGPDVK
KLCVLNQILKDTPTAINRALITSYSLESFQRECRSVLEKLETDGHFALARKVAELAGLPV
DDLVIEEMTQEMQTLKRIDQWSLKQARIDFWKKCHENFKKNSISSRAAASFFSAQALWAG
ECPAAGGPSSAEERHLLLTLAGHWLAREDPVPLQDLEGLEKQVWLCRIAQHTLTGSQEEG
GPRAPQQASAGGDLSLDGLASEFSFSNLAVLNTSKYLELTGLPSRDICDSELNWKEQASL
NCLIGRLLDDGCVHEASRACRYFRFYHQDVALVLHCRALASGEASEDDLHPEILALLGSA
ELPEEEEASSLDSRSFVMLPPVDEVVTNLETLTSKCLHGKHCCRQVLCLYELAKELGCSY
ADVAAQDGEAVLRAILASQQPNRCKRAQAFISTQGLRPDTVAALVAEEVTRELLTPSEGT
GHRQVFSPAEESQIFLQLTALCQDPTLVGMKLLEKISSVPHGELSCTTELLILAHQCFTL
TCHMEGIMRVLQAARLLTDNHLAPSEEYGLVVRLLTGIGRYSEMTYALDLLHERHCFEML
MRKKLDPSGTLKTALLDYIKRRRPGDSEKHNMIALCFSMCREIGENHEAAACIQLKLIES
QPWEDHVKDGRRLKQLLLKALTLMLDAAESYAKDSCVRQALRCQRLTKLITLQIHFLNTG
QNTMLINLSRHRLMDCVTALPRFYQASIVAEAYDFIPDWAEILYQQVILKGDFNYLEEFK
QQRLLRPSIFEEISIKCKHHQPTEFVLKNLRKFLTCCEDVYLYYKLAYEHKLYDVVNVLL
KDPQTGCCLKDMLAGVAFTIL
NT seq
7266 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggaggagcgggtgctgcccgttttgttggtgccggtctccgccgaggccaca
gggcggctggggccccgggcgcagctgcacagagagcaggcggccctgggcagtctgacg
gcctcaggcagcctccgcgtgctccccttggcgccgggcggccgaggcgggggcgactgc
ctcctggaaggctgttttcggcagtttgtatgggagggttctcatcacagtgggacacca
aacaacaagcccagactggttgctcttactggaaattatgaactgctcatctatgaattt
aatttggaaggtggaagatgtgatgcaaccgttttgtatagctatagtgagaagacattg
cagaagcttgttgaagatcaaaatatcagtttttccttgttatctttgaggattctgtcg
tttcacaacaacacatcattattgttcatcaacaaatgtgttgtcctacatgttatgttt
gctgaaagagatgctgaaattagggtactcagctgttacacgttgcccttacctgcgcag
gcagtggacaggattattgacacgcagctctgcagaggaattctctttgttttgagtagt
ttaggctggatctacatttttgacattgtgggtggcagacaagtagctcaggtggattta
gcactctctcaggaagatgtgtgtaatgagcagcaacaggagccagccaagagctcttcg
tttacttcactgaaagtgtctcaggacctggatgttgtcgtggtggtgggcttccccaac
actgcagttgctgttaacttgactttgtacttcaggcaatacccaggacatctgttatgt
gaaaaaactctacaggacatccctattgaaggtcccgaggggatagatgaagatgatcct
gttaattctgactacaacatgaaactgaccaagttttccttccgaattgataggtcttgg
aaagcccagctgtcgtcattgaatgaaacaatacagagttccaagctgggagggtcctgc
tgtgctccgtggttccaggatatttcgcatctggagtcccctgaatctggtgaccgcagt
accagtgtgtcagactgggcctttgctccacaggatgtgacgtgtagcccgtgtaattct
ccacagaaaggccctgcgaggaccattgacgcaggacgagtgtggaaaaggatgcgcctc
agggaacgggaggagcccctcgagctcacctgcgtgtctgtgacaggcttcactgcactg
ttcacttgggcaggggaaggctcaggctggaccattgtcctgtgggacttggagacccag
agcacgcagtgttttttgctgggcaaaaagtgtattcctgtagacagtggtggagcccag
cagctgtgcctcgtcttgacagaaaatggactctctctgattttgtttggtttgactcaa
gaggaatttttaaataggctgatgatccacggaagtgccagcactgtggactctctttgc
catctcaatggttgggggcggtgttccatccccatacacgcgctcgaggcaggtatagaa
aatcgtcagctggacacagtagatttctttttaaagagcaaggaaaatcttttgactcca
tcctcaaaatcttctgtacctgatcagtttgatcactttgcatcccatttatatttaaaa
catgtggaagagctgacaccagcattggatttactttgctcagcaattagagaaaatgat
tctgaaacccaaagcaaacacttttcagaacagttacttaaccttacactgtcttttctt
aacaaacaaataaaggagctttttattcacattgaagagctagatgaacatctacagaaa
ggagtggacattttgaccagctacattgatgaacttcgaaccttcatgataaagtttccc
tggaagctaacagatgctatagatgagcatgacgtagatgaaaacgtccccaaagtaaag
gagagcagcatatgggagagactcagcgttgaggaagttattgccaatgccattttaagc
aacaaaataccagaggcacaaactttcttcaggattaacagtcattctgctcaaagactt
gaggagttgattagaataggcctcgatttggtctttgacaatttgaaaaagaacaacata
gaggaagcctctgagcttttgaagaatatgggctttaatgtaaaagaccagttgctcaag
atatgcttccatacaactgataaaagtatacgggactttctggttgaaatttttaaagaa
aaaaattatttttctgaaaaagagaaaaggactgtagagtttgtgcttcaagttgagaag
ttttattcaggacatttacaagaagatatacagatccggtctttacccaggtattggata
aaggaacaagatttttccaagcacaagtctgttttggactcgttcctgaaatatgatcat
aaagataacaagcaggatcatagaattgtgttaaattgggctcagtggtggaatcagcca
acacaagaatccatccttctcccccggataaatccagaaggatataactcatattctcct
gaagccctctggagatacctcacagcacgccatgattggcccagcattatcctgtggatt
ggagaatttcagacccagagcagttatgcttcacttgagcagaataaatggccgcttctg
actgtggatattgttgatcagaatacttgttgcaacaactacatgagaaatgaaatttta
gataagctggccaggaatggaatttttcttacatctgagttagaagactttgaactcttc
cttgtcagactgaaccatgttgggggtgtgatgcaggacgccctcgctgttcaaaactat
aggtccaaagaaggatgggatttccactctcgcttcattctctattgtttggaacacagt
cttcagcatcttctttatgtctatcttgaccattacaaacttagtcctccaaattgtcct
tttttgggaaaaaaagaattacatgaggctcacccttggtttgaatttttagttcagtgt
cgacaagtttccagtaatttaacagatcccagactgatcttccaggctagccttgcaaat
gctcagatactgattcccagcaaccaggccagtgtcagcagtatgctgttggaaggacat
accctcctggcccttgctaccacagtgtatgcccctgggggcgtcagccaggttgttcag
aatggagaaactgagaactctctgaagaaagtagatccccagctactgaagatggcattg
actccttacccaaagcttaaagctgctctgttcccacagtacaccaccgctagtgtcctg
cctcccgacatcacactctaccacctcattcagttattgttgccctttgatcccagcaga
ttgtttggctggcagtctgccaacacattggctataggagatgcagcgagtcagctccca
catttctctagccctgacctggttggtagatacgctgtagtagagtgcctgaattacgct
tactatttacgtcatgggcggccgtcatttgcgtttggtactttcctggttcaggaatta
accaagagcaagacccccaagcagctgatccagcaagtaggcagtgaagcctatggttta
gggctctcctgcttccacatatcttcaataggagccgcctgtgtatgcttcttagaattg
cttggtctcgacagcctcaagctcagagttgatatgaaagtggccaatataattttgaac
tacaagtgtggaagtgaagatgctcagtacaactctatcagagagtctctggctggaaag
ctgtctagacttgctgtgggtgagagggcagccaccgaagagctgcttgttctcttagaa
gaaggcatgtggaccagcattcagcggcaggaagcacagaggttatccagtggatccagc
agccagtgggcattagtggcacagttctgcaggctccacaatatgaaaccaagcacatct
taccttagagaatgtgccagagcaaatgattggttacagtttattattcacagccagctc
catagtcaccacccagaggaggtgcaatatcttctccagcatttcagccctgttcttcag
gaccacttaagactggcttttgagaacttgccctcagtgtccaactccagaatggacagt
gaccaagtctgcagcacgtcctcccaggaactccagagacacaaagaagagacgacgaat
ttctttcagcttctgcttcagtgttcagaggtgccaggctcctggtgctggctgctgaga
gaagcggtgagacagaaggccccagtccttagtgtcctggcctcgtgtctccaggatgcc
agtgctgtctcttgcctctgtgtctggatcatcgcctctgtcgagccccgcattgccact
gaagcagggggaccccttcaggactcagtggagggccacgtctggggcctggaggacctc
tccgtcatctggaggacattgctgacaaggcagaagatcaggactctgatcagaggcttc
cagcttttctttaaggattccccactcctcttgatgatggagatatatgaactctgtatg
ttcttcaagaattataaggaggctgaagctaaacttgtggagttccagcagagccttgaa
actcttgagacagcagccacaagggtccccgctgccatccctgcgccgtggctgaaggag
cacgtgtgtttccttttgaagcttatgctgcagcagtgtggcacccagtatgagctgggg
aggcttttacagctgtttgttggaatagagcatctcttctctgatggcccagatgtgaag
aagctgtgtgtcctcaatcagattctgaaggatacacccacagccattaaccgtgcactc
attaccagctacagccttgagagtttccagcgtgaatgtaggtcagttttggaaaaactg
gagacagacggacactttgctttggccaggaaggtagccgaactagctgggctgcctgtg
gacgacttggtgattgaagagatgacacaggaaatgcagaccttaaagcgcattgaccag
tggtccctgaaacaagcacgaattgacttctggaaaaaatgtcatgagaattttaagaaa
aattccatttctagcagagcagcagcttcttttttctcagcccaggccctgtgggcaggt
gagtgccccgctgcagggggccccagcagcgccgaggagcgccacctgctgctcacgctg
gcggggcactggctcgcccgggaggacccagtgcctctgcaggacctggagggcctggag
aagcaggtctggctctgccgtatcgcccagcacaccctcacgggcagccaggaggaagga
gggcccagggcgcctcagcaggcctcagctggaggtgacctttcccttgatggcttagcc
agtgagttttcgttctctaacttggctgttctgaacacatcaaaatacttagaactcact
ggccttccatccagagacatttgtgacagtgaactgaactggaaggagcaggcgtcccta
aactgtttgatcgggcgcctgctggatgacggctgtgtgcacgaagcaagccgagcgtgc
cggtatttccgtttctatcaccaagacgttgccttggtgctgcactgcagggcgctcgct
tcaggggaggctagtgaggatgacctgcacccggagatcctcgcgctcttggggagtgct
gagcttcctgaggaagaagaggcttccagtctggacagtcggtcgtttgtgatgctgccc
cccgtggatgaagtggtgacgaacctggaaactctgacaagcaagtgcctccacgggaag
cactgctgccggcaggtgctctgtctctacgagctcgccaaggagctgggctgttcctac
gcagacgtcgctgcccaggatggtgaggccgtgctccgggccatcttggcctctcagcag
cctaatcgatgcaagcgagctcaagccttcatcagcacccagggcctcaggccagacaca
gtggctgcacttgtggctgaagaggtgacccgggagctgctgacaccgtcggagggaaca
ggacacaggcaggtgtttagcccagcagaggaaagccagatatttcttcagctgaccgct
ttgtgtcaagaccccaccttggtgggcatgaagttgttggagaagatttcttctgttccc
cacggggagctatcttgcaccacagagctgctgattctggctcatcagtgcttcacgctg
acctgccacatggagggcatcatgcgcgtcctgcaggccgcccggctgctcactgacaac
cacttggcccccagtgaggagtacgggctggtggtgcgtctcctcactggcatcggcagg
tacagtgagatgacgtacgcgctcgacctgctgcacgagaggcactgctttgagatgctc
atgaggaagaagctggaccctagtggcaccctgaagacggccctgctggactacatcaag
cgccgccgccccggcgacagcgagaagcacaacatgatcgcgctgtgcttcagcatgtgc
cgggagatcggcgagaaccacgaggcagccgcctgcatccagctgaagctgatcgagtct
cagccctgggaggaccacgtcaaggatgggcggcgactgaagcagctgctgctgaaggcc
ctgactctgatgctggacgcggcagagagttacgccaaggactcctgcgtgcgccaggcc
ctgcgctgtcagcggctcaccaagttgattacgctgcagattcactttctgaacaccggc
cagaacacaatgctcatcaacctgagtcgccacaggctgatggactgtgtcacggccctg
cctcggttctaccaggcttccattgtggcagaggcctatgactttattcctgactgggct
gaaattctgtatcaacaagtgattcttaaaggagactttaattacttggaagaattcaag
cagcaaaggttattaagacccagtatatttgaagagatttcaataaaatgtaaacatcat
cagcctacagaatttgttctgaaaaacctgaggaagttcctcacatgctgtgaagacgtc
tacctgtattataagctggcgtacgaacacaagctttatgatgttgtcaatgtgcttctg
aaggaccctcagaccggctgctgtctgaaggacatgctagcaggggtggcttttaccatc
ctatga
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integrated database retrieval system
