Budorcas taxicolor (takin): 128055242
Help
Entry
128055242 CDS
T08909
Symbol
NUP188
Name
(RefSeq) nucleoporin NUP188 isoform X1
KO
K14311
nuclear pore complex protein Nup188
Organism
btax
Budorcas taxicolor (takin)
Pathway
btax03013
Nucleocytoplasmic transport
btax05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
btax00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128055242 (NUP188)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
128055242 (NUP188)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btax03019
]
128055242 (NUP188)
Messenger RNA biogenesis [BR:
btax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128055242 (NUP188)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Nup188_SH3-like
HEAT_SCC3-SA
DUF4912
Gar1
Motif
Other DBs
NCBI-GeneID:
128055242
NCBI-ProteinID:
XP_052503637
LinkDB
All DBs
Position
11
Genome browser
AA seq
1752 aa
AA seq
DB search
MAAAAGGPCVRSSRELWTILLGRSALRELNQIEAELNKHWQRLLEGLSYYKPPSPSSAEK
VKASKDVASPLKELGLRISKFLGLDEEQSVQLLQCYLQEDYRGTRDSLKTVLQDERQSQA
LILKIADYYYEERTCILRCVLHLLTYFQDERHPYRVEYADCVDKLEKELVTKYRQQFEEL
YKTEAPTWETHGNLMTERQVSRWFVQCLREQSMLLEIIFLYYAYFEMAPGDLLVLTKMFK
EQGFGSRQTNRHLVDETMDPFVDRIGYFSALILVEGMDIESLHKCALDDRRELHQFAQDG
LICQDMDRLMLTFGDIPHHAPVLLAWALLRHTLNPEETSSVVRKIGGTAIQLNVFQYLTR
LLRSLASGGNDCTTSTACMCVYGLLSFVLTSLELHTLGNQQDVIDTACEVLADPSLPELF
WGTEPTSGLGIILDSVCGMFPHLLSPLLQLLRALVSGKSTAKKVYSFLDKMSFYNELYKH
KPHDVISHEDGTLWRRQTPKLLYPLGGQTNLRIPQGTVGQVMLDDRAYLVRWEYSYSSWT
LFTCEIEMLLHVVSTADVIQHCQRVKPIIDLVHKVISTDLSIADCLLPITSRVYMLLQRL
TTVISPPVDVIASCVNCLTVLAARNPAKVWTDLLHTGFLPFVAHQVSNMSQMISAEGMNA
GGYGNLLMNSEQPQGEYGVTVAFLRLITTLVKGQLGSTQSQGLVPCVMFVLKEMLPSYHK
WRYNSHGVREQIGCLILELIHSILNLCHETDLHSSHTPSLQSLCICSLAYTEAGQTVINI
MGIGVDTIDMVMAAQPRSDGAEGQGQGQLLIKTVKLAFSVTNNVIRLKPPSNVVSPLEQA
LTQHGAHGNNLIAVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGSDAAAIRDA
FLTRLQSKIEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGSDGSKEFSLGVWSCLH
AVLELIGSQQQDRYWCPPLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTSPLFGT
LSPPSETSEPSILETCALIMKIICLEIYYVVKGSLDQSLKDTLKKFSSEKRFAYWSGYVK
SLAVHMADTEGSSCTSLVEYQMLVSAWRMFLIIATSHAEITHLTDSAVRRQLFLDVLEGT
KALLLVPASVNCLRLGSMTCTLLLILLRQWKRELGSVDEILGPLTEILEGVLQADQQLME
KTKAKVFSAFITVLQMKEMRVNDIPQYSQLVLNVCETLQEEVIALFDQTRHSLATGSATE
DKDSMETDDCSRLRHKDQRDGQVCVLGLHLAKELCEVDEDGDSWLQVTRRLPILPTLFTT
LEVSLRVKQNLHFTEAALHLLLTLARTQQGATAVAGAGITQSICLPLLSVYQLSTNGTVQ
TPGTSRKSLDAPSWPGVYRLSMSLMERLLKTLRYNFLTEALDFVGVHQERTLQCLNAVRT
VQSLACLEEADHTVGFLLQLSSFRKEWHFHLPQLMRDVQVNLGYLCQACTSLLHSRKVLQ
HYLQNKNGEGIPSAVTPRAQRPPAAAPAAPSCSSSKQPIPDTEASEQRALRTVQYGLLRI
LSRTLAALRRFTPDVCQVLLDQSLDLAEYSFLFALSFTTPTFDSEGAPSFGTLLATVNVA
LNMLGELDKKKEPLTQAVGLSTQVEGTRTLKSLLMFTMENCFYLLISQAMRYLRDPAVHP
RDKQRMKQELSSELSTLLSSLSRYFRRGAPSSPAAGVLPSPQGKSTSLSKVSPESQEPLI
QLVQAFVRHVQR
NT seq
5259 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgccgccggcggtccgtgtgtgaggagcagtagagaactgtggacaattctg
ctaggaaggtcagctctgagagaactgaatcagattgaggcagagctgaataaacattgg
cagcggctgttagaaggactttcttactataaacctcccagtccaagttcagctgaaaaa
gtgaaagctagtaaagatgtagcttcaccactgaaggaactgggtttaagaatcagcaag
tttttgggtcttgatgaagaacagagtgtgcagttactccagtgttaccttcaagaggat
tacagaggtactcgggactcgctaaagacggtgctgcaagatgagaggcagagccaggcc
ttaatcctgaagattgcggattattactatgaagaaagaacctgtattcttcgttgtgtc
ttacaccttctcacttatttccaagatgaaagacacccctatagggttgaatatgccgac
tgtgtggataaattggaaaaggagctagttacaaaatatagacagcagtttgaagagctt
tataaaactgaagcaccaacatgggagacacatggaaacctcatgactgagcgccaggtg
tctcgctggtttgttcagtgccttcgggagcagtccatgctgctagaaatcattttcctg
tattatgcatactttgagatggcacctggtgacctattggtgttaaccaagatgtttaaa
gagcaaggatttggtagtaggcagactaacaggcacctggtggatgagaccatggatcct
tttgtggatcggattggctacttcagtgcccttatcctggtggaaggcatggatattgaa
tccttgcataagtgtgctttggatgacagaagagaactgcaccagtttgcccaggatgga
cttatttgtcaggatatggaccgtttgatgttgacctttggggacattccgcatcatgcc
ccagtgctcttggcatgggccctcctccgtcacactctgaatccagaagagacaagcagt
gtggtccggaagataggggggacagccatccaactgaatgtctttcagtacttgacccga
ctgctccgctcgctggccagtgggggaaatgactgtaccaccagtactgcgtgcatgtgt
gtttatggactcctttcttttgtcctgacctccctggagctgcacaccctgggcaaccag
caggatgtaattgacacagcatgtgaagtcctggcagacccttctctcccagaactgttc
tggggaacagaaccaacctctggtcttgggatcattctggacagtgtatgtggaatgttt
ccccatctcctctctccactcctgcagttgcttcgagcccttgtatcagggaagtctact
gctaagaaggtgtatagtttcttggataagatgtctttctacaatgaactctataagcac
aagccccatgatgtgatctcccatgaagatggaaccctttggcggaggcaaacacccaaa
ctcctttaccctctagggggtcagaccaaccttcgcatacctcaaggcactgtgggccag
gtgatgctggacgatagggcctacctggtgcgctgggaatactcgtatagcagctggacc
ctcttcacctgcgagattgagatgctgctgcacgtcgtttccactgcagatgtgattcag
cactgccagcgggtcaaacccatcatcgacctggtccataaggtcatcagcacagacctg
tcgatagcggactgcctcctgcccatcacgtcccgcgtctacatgctgctgcaacggtta
acaacagtgatctccccgcctgtggatgtcattgcttcttgcgtcaattgcttgactgtt
ttggctgcccggaacccagcaaaggtctggactgatcttcttcacacaggcttcttgcct
ttcgtggcccaccaggtctccaacatgagtcagatgatcagtgctgaggggatgaatgct
ggtgggtatggaaacctcttgatgaatagtgaacagccccagggcgagtatggggtcact
gttgcctttctgcgcttgatcaccactcttgtcaaggggcagcttggtagtacccagagc
caagggctggtgccttgtgtcatgtttgtgctgaaggagatgctgccaagttaccacaag
tggcgctacaactcccatggtgtgagagaacagattggttgcctgatcctggagctgatt
cattcaatactgaacctgtgccatgagacagacctgcacagcagtcacacccccagcctg
cagtctctctgcatctgcagcctggcctacacggaagcaggacagacagtaatcaatatc
atgggcatcggcgtggacaccatcgacatggtcatggctgctcagccccgcagtgatggg
gcagagggccagggccagggccagctgctgatcaagacagtgaaactggcattctccgtc
accaacaatgtcattcggctgaaacctccttctaatgtggtgtcccctctggaacaggct
ctcacacagcatggtgcccatgggaacaaccttattgctgttcttgccaaatacatctac
cacaaacacgacccagctctgcctcgtcttgccatccagctgctaaaacgtctggccacg
gtggcccccatgtcagtgtacgcctgcctgggcagtgatgcggctgccatccgagacgcc
ttcctgacccgattgcagagcaagattgaggatatgcgcatcaaagtcatgattctggaa
ttcctcacggttgctgtagagacgcagccaggcctcattgaactgtttctgaatctggag
gtgaaggatggcagcgatggctccaaggaattcagccttggggtgtggagctgtctccac
gcggtactggagctgatcggttcgcagcagcaggaccgctactggtgccccccactgctg
caccgggcggccatcgcctttttgcacgccctgtggcaggaccggcgggacagtgccatg
ctggtcctcagaaccaaacccaagttttgggagaatctaacgagtccgctatttggtacg
ctttctcctccctcggaaacatccgagcccagcatcctggaaacctgtgccctaatcatg
aagataatttgcttggagatatactatgtagttaagggctcattagaccagtcattaaaa
gatacactcaagaaattttccagcgagaagcgctttgcctactggtcggggtatgtcaag
tccttggcggttcacatggccgacacagagggcagcagctgcacctccctggtagagtat
cagatgctggtctccgcctggaggatgtttctcatcattgccaccagtcacgcggagata
acgcacctgacggactctgcagtgcgtcgccagctctttcttgacgtgctcgaggggacc
aaggcattactcctcgtccccgcctccgtgaactgcctccgcctcggctccatgacgtgc
accctgctgcttattctcctccggcagtggaaaagagagttagggtctgtggatgaaatc
ctcgggcccctgacggagatcctggagggagtgctgcaggcagaccagcagctaatggag
aagaccaaggccaaggtgttctcggcgttcatcacggtgctgcagatgaaggagatgaga
gtgaatgacatcccccagtactcccagctggtgctgaacgtctgtgagacccttcaggaa
gaggtgatcgcacttttcgaccagacccgccacagcctggcgacgggcagtgccactgag
gacaaggacagcatggagactgatgactgctcccggctccggcacaaggaccagagggat
gggcaggtctgtgtcctgggcctgcacctggccaaggagctgtgtgaggtggatgaggac
ggggactcgtggctgcaggtgacccgccggctccccatcctgccgaccctcttcaccacc
ttggaggtgagccttcgcgtaaagcagaacctgcatttcaccgaggcggcgctgcacctg
ctcctcacgctggcccgcacccagcagggggccacggctgtggccggagccggcatcacc
cagagcatttgtttgcctctcctgagtgtgtaccagctcagtaccaatgggacagtgcag
acacccggcacctctcggaagtccctggatgccccctcttggcccggcgtctaccgtctc
tccatgtccttgatggagcggctcctcaaaaccctgcgctacaacttcctgaccgaggcc
ctggacttcgttggggttcaccaggagcggaccttacagtgcctcaacgcagtgaggacg
gtgcagagtctggcgtgcctggaggaggccgaccacaccgtgggcttcctcctgcagctc
tccagcttcaggaaggagtggcacttccacctgcctcaactcatgcgggatgtccaggtg
aacctcggctacctgtgccaggcctgcacctccctcctgcacagccgcaaggtgctgcag
cactacctgcagaacaaaaatggggagggcatcccctcagccgtcaccccccgagctcag
cggccacccgcagctgctccggctgccccctcctgctcctcctccaagcagcccattccc
gacacggaggcctcagagcagcgggccttgcgcaccgtccagtacggcctcctgaggatc
ctcagcaggaccctggctgccctgcgccgcttcacccccgacgtctgccaggtcctgctg
gatcagtccctggaccttgctgagtacagcttcctgtttgccctgagcttcaccactccc
acttttgactccgaaggggccccctccttcgggacccttctggccaccgtgaatgtggcc
ctgaacatgcttggagagctggacaagaaaaaggagcctctcacccaggctgtggggctc
agcacacaagtggaagggaccagaactctgaagtcgctcctgatgttcaccatggagaac
tgcttctacctgctcatctcccaggcgatgcgttaccttcgggacccggctgtgcatccc
cgggacaagcagcggatgaagcaggagctcagctcagagttgagcactctcctctccagc
ctctcccgctacttccgccggggagcccccagctcccctgctgctggcgttcttccctcg
cctcagggcaagtccacctctctgtccaaggtcagccccgagagtcaggagcctctgatc
cagctggtgcaggcctttgtccgacacgtgcaaagatag
DBGET
integrated database retrieval system
