KEGG   Budorcas taxicolor (takin): 128057499
Entry
128057499         CDS       T08909                                 
Symbol
HMGB1
Name
(RefSeq) high mobility group protein B1
  KO
K10802  high mobility group protein B1
Organism
btax  Budorcas taxicolor (takin)
Pathway
btax03410  Base excision repair
btax04140  Autophagy - animal
btax04217  Necroptosis
btax04613  Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:btax00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    128057499 (HMGB1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    128057499 (HMGB1)
  09143 Cell growth and death
   04217 Necroptosis
    128057499 (HMGB1)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    128057499 (HMGB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:btax03036]
    128057499 (HMGB1)
   03400 DNA repair and recombination proteins [BR:btax03400]
    128057499 (HMGB1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:btax04147]
    128057499 (HMGB1)
Chromosome and associated proteins [BR:btax03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    128057499 (HMGB1)
DNA repair and recombination proteins [BR:btax03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     128057499 (HMGB1)
   MMR (mismatch excision repair)
    Other MMR factors
     128057499 (HMGB1)
Exosome [BR:btax04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   128057499 (HMGB1)
SSDB
Motif
Pfam: HMG_box_2 HMG_box HMG_WDHD1 NOA36 HMG_box_5 Nop14
Other DBs
NCBI-GeneID: 128057499
NCBI-ProteinID: XP_052505882
LinkDB
Position
12:30366094..30371296
AA seq 215 aa
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK
SKKKKEEEEDEEDEEDEEEEEDEEDEEEEEDDDDE
NT seq 648 nt   +upstreamnt  +downstreamnt
atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattctttgtg
caaacttgccgggaggagcacaagaagaagcacccggatgcttcagtcaacttctcagag
ttttctaagaagtgctcagagaggtggaagaccatgtctgctaaagagaaaggaaaattt
gaagacatggcaaaggctgacaaggcccgttatgaaagagaaatgaaaacttatatccct
cctaaaggggaaacaaaaaagaagttcaaggatcccaatgcaccgaagaggcctccttca
gcctttttcttgttttgttctgagtatcgtccaaaaatcaaaggcgaacatcctggcctg
tccattggtgatgttgcaaagaaactgggagaaatgtggaataacactgctgcggatgac
aagcagccttatgagaagaaggctgctaagctgaaggaaaaatatgaaaaggatattgct
gcataccgagctaaagggaagcctgatgcagcaaaaaagggagttgtcaaggctgaaaaa
agcaagaaaaagaaggaagaggaggaagatgaggaagatgaagaggatgaggaggaagaa
gaagatgaagaggatgaggaggaagaagaagatgatgatgatgaataa

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