Budorcas taxicolor (takin): 128057620
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Entry
128057620 CDS
T08909
Symbol
COL7A1
Name
(RefSeq) collagen alpha-1(VII) chain
KO
K16628
collagen type VII alpha
Organism
btax
Budorcas taxicolor (takin)
Pathway
btax04382
Cornified envelope formation
btax04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
btax00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
128057620 (COL7A1)
09158 Development and regeneration
04382 Cornified envelope formation
128057620 (COL7A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
fn3
VWA
VWA_2
Pur_ac_phosph_N
Kunitz_BPTI
Ig_DSCAM-DSCAML_C
FN3_Tor_3rd
DUF4992
Motif
Other DBs
NCBI-GeneID:
128057620
NCBI-ProteinID:
XP_052506039
LinkDB
All DBs
Position
1:complement(9263967..9294341)
Genome browser
AA seq
2934 aa
AA seq
DB search
MRLRLLLAALCAGILAGAPRVWAQPRERVSCTRLYAADIVFLLDGSSSIGRSNFREVRGF
LEGLVLPFSGAAGAQGVRFAAVQYSDDPRTEFDLDALGSGGDVIRAIRELSYKGGNTRTG
AAILHVADRVFLPQLARPGVPKVCILITDGKSQDMVDTAAQRLKGQGVKLFAVGIKNADP
EELKRIASQPTSDFFFFVNDFSILKTLLPLVSRRVCTTAGGVPVTLPPDDSTSGPRDLLL
SELGSQSLRVQWTAASGPVTGYKVRYARLTGLGQPLPSTLQEVSVPAGETSVRLQGLQPL
TEYQVTVVALYANSIGEAVSGTARTTALEGPEVTIQNTTAHSLLVAWRNVPGATGYRVTW
RVVRGGATQQQELGPGQGSVLLRDLQPGTDYEVTVSALLGRSIGPATSLTARTDTSVEQT
LRPVILGPTSILLSWNLVPEARGYRLEWRRESGLEVPQKVVLPSDVTRYQLDGLQPGTEY
RLTLYTLLEGREVATPATVVPTELPVGPVTALQATELPGQRVRVSWSPVSSATEYRITVR
SAQGVERSLVLPGSQTAFDLDDVRAGLSYTVRVSARVGSREGAASILTVRREPETPLTTP
GLRVVASDATRVRVAWGPVPGASGFRISWRTDNGLESSQTVPSDSTATDIVGLRPGTSYQ
VAVSALRGREEGPPAVIVARTEPLGPVRSVHVTRVSSSSVTITWNRVPGATGYRISWRSG
RGPEKSQLVSGEATVAELDGLEPDTEYTVRVWARVAGVDGTPASAVVRTDPQPVGSVSKL
QILNASSDVLRVTWVGVTGATAYRLAWGQSEGGPTRQQILPGNTDSAEIRGLEGGVSYSV
RVTALVGDREGAPVSIVVTTPPEAPPALETLRVGQRGEHSLRLHWQPVPGARGFRLRWRP
EGGQEQSRVLGPEVSSYDLDGLEPATHYRIWLSVLGTAGEGPPSEVTAYTESPRVPSTQL
RVVDTSVDSVTLAWTPVSGVSSYILSWRPLRGPGQELPGASQTLPGTSTSQRVTGLELGI
SYLFSLTPVRDGVRGPEASITQSPACPRGLMDVVFLVHTTRDNAHRSEAVKRALEHLVSA
LGPLGPQAVQVGLLSYSHRPSPLLSLNSSHDLGVILQKIRNIPYTDPSGNNLGTAVVTAH
KYLLAPDAPGRRWHVPGVMVLLVDEPLRGDIFNSVREAQAAGLKVVMLGLAGADPEQLRR
LVPGMDPSQTFFAVDDGPSLELAISSLAAALCQTALTTQPQPEPCSVHCPKGQKGEPGQM
GLKGQAGPPGPPGLPGRIGAPGPQGPPGSVSAKGERGFPGADGLPGTPGRPGTPGAPGPK
GSPGWAGPRGEPGERGPRGPKGEPGEPRQAIGGEGPGLPGQKGDPGPPGPPGSRGPLGDP
GPRGPPGFPGTAVKGEKGDRGERGPPGPGDGTAALGEPGLPGLPGSPGPQGSVGPPGEKG
EKGDCEDGAPGLPGQPGIPGERGLRGLPGDAGPKGNRGLTGAAGEAGEKGERGLPGPVGP
QGLPGVAGRPGPEGPEGPPGPTGRRGEKGEPGRPGDPAVGPGGAGAKGEKGDMGPPGPKG
ATGFKGEQGSPGLALPGDPGPKGDPGGRGPTGLTGRAGPPGDSGPPGEKGDPGRPGSPGP
VGPRGRDGEAGEKGDEGPPGDPGLPGKAGERGLRGAPGARGPVGEKGDQGDPGEDGRNGS
PGPSGPKGDRGEPGPPGAPGRLVDVGLGAGEKGEPGDRGQEGPRGPKGDPGPPGASGERG
ISGLRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGASGPPGPNGATGKAGDPG
RDGLPGLRGEQGPPGPAGPPGAPGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGDSGAPG
REGRDGPKGERGAPGSPGLQGPPGLPGQVGPPGQGFPGVPGSSGPKGDRGETGPRGEQGL
PGERGLRGEPGSLVNAERLLENIGIKTSALREIVETWEESSGGFLPAPERRRGPKGDPGE
RGPPGKEGPIGFSGERGPKGDRGDPGPQGPPGLAVGERGLPGPPGLAGEPGKPGIPGLPG
PAGSVGEAGRPGERGERGEKGERGEQGRDGLPGLPGPPGPPGPKVAVDEPGSGLSREQGP
PGFKGAKGDPGSDGDRGPKGDRGEPGIKGDRGEPGQRGQNGSPGLPGERGVAGPEGKPGL
QGPRGTPGPAGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLPGPTGAVGLP
GPPGPSGLVGPQGAPGLPGQVGETGKPGAPGRDGATGKDGDRGAPGVPGSPGLPGPVGPK
GEPGPMGTPGQAVVGPPGAKGEKGAPGALAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGE
PGDPGEDGQKGAPGPKGHKGDPGVGVQGPPGPVGPPGLKGDSGPPGPPGPPGIVGFPGQT
GLRGEQGQPGPTGERGLAGAPGREGAPGPLGPPGPPGSAGAPGAPGLKGDKGDTGAGLPG
ARGERGEPGVRGEDGRPGLEGPRGLAGPPGSRGERGEKGDPGASGLKGDKGDSAVILGPP
GPRGAKGDSGERGPRGIDGEKGPRGDSGEPGEKGTKGEPGDKGSAGLLGARGLTGPKGEP
GAPGIPGEPGSPGKDGVPGVRGDKGDIGFMGPRGLKGERGIKGACGLDGEKGDKGEAGPP
GRPGLAGRKGELGEPGVPGQAGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGPPGVG
GFPGPRGNDGSSGPPGPPGSIGPKGPEGLQGQKGERGPPGQSVVGTPGAPGTPGERGEQG
RPGPAGPRGEKGEAALTEDDIRGLVRQEMSQHCACQGQYIASGSRPLPSYAADTAGPQLH
PVPVLRVSHAEEDGQVPPEDDEYEYSEYSEEEYQDPAAPWDDDDPCSLPLDEGSCSAYTL
RWYHRAGAGGTKACHPFVYGGCGGNANRFGTREACEHRCLPQAAHSQGTGAAQS
NT seq
8805 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgcggctcctgctggctgcgctctgcgccgggatcctggcaggggcgccccga
gtgtgggcccagcccagggagagagtgagctgcacgcgcctctacgccgctgacatcgtg
ttcctccttgacggctcctcgtccatcggccgaagcaacttccgcgaagtgcggggtttc
cttgaggggctggtgctgcccttctctggggcagctggggcacagggtgtgcgcttcgcg
gccgtgcagtacagcgacgacccacggacagaatttgacctggatgcacttggctcaggc
ggcgatgtgatccgtgccatccgagagctcagctacaaggggggcaacacgcgcacaggg
gccgcgattctccacgtggctgaccgcgtcttcctgcctcagctggcccgacctggtgtc
cccaaggtctgtatcctcatcacagatgggaagtcccaggacatggtggacacagctgcc
cagaggttgaaggggcagggagtcaagctgtttgctgtgggcatcaagaatgctgaccct
gaggagctgaagcgaatcgcctcacagccgaccagcgatttcttcttcttcgtcaatgac
ttcagcatcttgaagacgctcctgcctctggtttcccggagggtgtgcacaactgctggt
ggtgtgcccgtgaccctgccccccgacgactcgacctctggtccacgagacctgctgctg
tctgagctgggcagtcagtccttgagagtccagtggacagcggccagcggccccgtaact
ggctacaaggtccggtacgcacgcctgacggggctgggacagccactgccgagcacgctg
caggaggtgagcgtcccagctggtgagaccagcgtgcggctgcagggtctccagccactg
actgagtatcaagtgacggtggtcgccctctacgccaacagcatcggggaggccgtgagc
gggaccgctaggaccactgctctggaggggccggaagtgaccatccagaacaccacagcc
cacagcctcctggtggcctggcggaatgtgccaggtgccactggctaccgggtgacgtgg
cgggtcgtcaggggtggggccacgcagcagcaggagctgggccctgggcaggggtcagtg
ttgctgcgggacctgcagcctggcaccgactatgaggtgaccgtgagcgccctgcttggc
cggagcatcgggccagccacctccctgactgcccgcactgacacgtctgtcgagcagacc
ctgcgtcctgtcatcctgggccccacgtccatcctcctctcctggaacctggtgcctgag
gcccgtggctaccggctggagtggcggcgtgagagtggcttagaggtgccacagaaggtg
gtgctgccctctgacgtgacccgctaccagttggatgggctgcagccgggcaccgagtac
cgtctcacactctacacgttgctagagggccgcgaggtggccaccccagcgaccgtggtc
cccactgaactgcccgtgggccccgtcacagccctccaggccaccgagctgcctgggcag
cgcgtgcgagtgtcctggagcccagtttccagtgccaccgagtatcgcatcactgtgcgc
agcgcccagggggttgagcggagcctggtgcttcctgggagtcagacggcctttgacttg
gatgacgtccgggctgggctcagctacacggtgcgggtgtcagcgcgagtaggcagccgg
gagggtgctgccagcatcctcactgtccgccgtgagccagaaaccccactgaccacccca
gggctgcgggttgtggcatcggacgcaacgcgagtgagggtggcctggggaccagttccc
ggagccagcggatttcggattagctggaggacggacaatggtctggagtccagccagaca
gtcccctcagactctaccgccaccgacatcgtggggctgagacctgggacctcctaccag
gtggccgtgtcggcgctgcgaggaagagaggagggcccccctgcggtcatcgtggctcga
accgaaccactgggcccagtgagatcggtccatgtgactcgagtcagcagctcatctgtc
accatcacctggaaccgggttcctggtgccacagggtacaggatctcctggcgctcaggc
cgaggcccagagaaatcccagttggtttctggggaggccacggtggccgaactggatgga
ctggagccagatactgagtacaccgtgcgtgtgtgggcccgtgtggctggtgtggacggg
acgcctgcctctgcagttgtgagaactgaccctcagcccgtgggcagcgtgtcgaagctg
cagatccttaatgcttccagtgacgttctgcgggtcacctgggtgggggtcactggagcc
acagcctacagactggcctggggccagagcgagggtggccccacaagacagcagattctc
ccaggaaacacggactccgcagaaatacggggcctcgaaggcggagtcagttattcagtg
agagtgaccgcactcgtaggggaccgcgagggcgcgcctgtctccatagtcgtcaccacc
cctcctgaggctcctccagccctggagacacttcgcgtggggcagcgaggggagcactcg
ctgaggctgcactggcagccggtgcctggtgcacgcggcttccgtctgcgttggcgacct
gagggtggccaggaacagtcccgagtcctggggccggaagtcagcagctatgacctggat
gggctggagccagcgacccactaccgcatatggctgagcgtcttggggacggctggagaa
gggcccccctcggaagtgactgcatacactgagtcacctcgtgtcccaagcactcaactg
cgtgtggtggacacgtcagtcgactcagtgactctggcctggaccccagtgtctggggtg
tccagctacatcctatcctggcggcctctcagaggccctggccaagaactgcctggggcc
tcacagacacttccggggacctcaacttcccagcgggtgacaggcctagagctgggcatc
tcctacctcttctccctaactcctgtccgggacggtgtacgtggtcctgaggcctctatc
acacagagcccagcgtgtccccgtggcctgatggatgtggtgttcctggtgcacaccact
cgagacaacgctcatcgctcggaggctgtgaagcgagccctggagcacctggtgtctgca
ctcgggcctctcgggccacaggccgtccaggtcggcctcctgtcctacagtcaccggccc
tccccactgttgtcgctgaacagctcccatgaccttggcgtcatcctgcagaagatccgc
aacatcccctacacggacccaagcgggaacaacctgggcacagccgtggttacagcccac
aaatacctgctggcaccagatgcgcctggacgccgctggcatgtgccgggggtgatggtt
ctcctggtggatgagcccttgagaggtgacatcttcaactctgtccgtgaggcccaggct
gctgggctcaaagtggtgatgctgggcctggcgggagctgacccagagcagctgcgtcgt
ttggtgcctggcatggacccttcccagaccttcttcgctgtggatgatggcccgagcttg
gagctggccatcagtagtctggcagcagccctgtgtcagacagctttgaccacacagcca
cagccagagccttgctcagtgcattgtccaaagggccagaagggggaacccggacagatg
ggcctgaaaggacaagctgggcctcctggcccccccggcctcccgggcaggattggtgct
cctggcccccagggacctcctggaagtgtctctgcgaagggcgagaggggcttccctggg
gcagatgggctcccaggcacccctggccgccctgggactcctggagcccctggtccgaag
ggctccccagggtgggctggccctcgtggagaaccaggagagcgaggacctcgaggccca
aagggggagccgggagagcccagacaagccattggaggcgagggcccagggcttcctggg
cagaaaggggatcctggacctccaggtccccctggatctcgtgggccgttgggggacccg
ggaccccggggtccccccggatttcccggaacagctgtgaagggtgagaaaggcgatcgt
ggggagcggggcccccctggaccaggtgacggcactgctgctctgggcgagcctgggctg
ccgggtcttcctggaagccctggaccccaaggctcagttggcccccctggagaaaaagga
gaaaagggtgactgtgaagatggagccccgggcctcccaggacaacccgggatcccgggt
gagcggggccttcggggacttcctggagatgctggccccaaaggcaaccgaggactaaca
ggggccgctggtgaggctggagagaagggtgaacgtggattgcctggcccagtgggacca
caggggctgccgggagttgctggacgacctggacctgagggtcctgaagggccaccagga
ccaaccggccgccgaggagagaagggggagcctggtcggcctggagaccccgcagtggga
cctgggggtgctggagccaaaggagagaagggagatatggggcccccggggcccaaagga
gctaccggattcaaaggggaacagggctcacctggcttggctcttcctggagaccctggc
cccaagggagaccctggaggccgaggtcccactggcctcactggcagagcaggacccccg
ggtgactcaggaccccctggagagaagggagaccctgggcggcctggttccccaggaccc
gtcggcccccgaggacgagacggtgaagctggagagaagggcgacgagggtcccccgggt
gacccaggtttgcctggaaaagctggcgagcgtggccttcggggggcgcctggagctcgg
gggcctgtgggtgagaagggagaccagggagatcctggagaggatggacgaaatgggagc
cctggaccttctggacccaagggtgaccgtggggagccaggtcccccaggagcccctgga
cggctggtggacgtgggacttggagccggagagaagggagagcctggggaccgaggacag
gagggtccacgaggacccaagggcgaccctggcccccccggagcttctggggagaggggc
atcagtggacttcgggggcctccaggcccacagggggacccaggtgttcggggcccagca
ggagaaaagggcgaccggggccctcctggcctggatggccgcagtgggctggatgggaaa
ccaggagcctctggtccccctgggccaaatggtgccacgggcaaggccggagacccaggg
agagatggacttccgggccttcgaggagaacagggcccccctggccctgctggtcccccc
ggagcaccgggaaagccaggcgaggatggcaagcctggcctgaatgggaaaaatggagag
cccggcgaccctggagaagatgggaggaagggagagaagggagattcgggcgcccctgga
agagaaggtcgtgacggccccaagggtgagcgtggagctcctggaagccctggactccag
ggccccccgggcctcccggggcaggtcggccctcccgggcagggcttccctggcgtcccg
gggagttcaggccccaagggtgaccgtggggagactggacccagaggggagcagggcctc
ccaggagagcgtggcctgagaggagagcctgggagcctggtgaatgcagagcggttgctg
gaaaatattggcatcaagacatctgccctgcgggagatcgtggagacctgggaagagagc
tctggcggcttcctgcctgcacctgaacggcgtcgtggccccaagggggacccaggcgag
cggggccccccaggcaaggagggccccatcggcttttctggagaacgtggaccaaaggga
gatcgtggagaccccggccctcaggggccacctggcctggccgtgggggagaggggcctt
cctggacctcccggccttgctggggagcctgggaagcctggtatccctgggctccctggc
ccggctgggagtgtgggggaggctggaagacctggagagaggggagaacggggagagaaa
ggagaacgtggagaacagggcagagacggccttcctggcctccctggaccccccggaccc
ccaggccccaaggtggccgtggatgagccaggttctgggctctctagagaacaaggaccc
cctggattcaaaggcgctaagggggatccaggcagtgatggcgaccgaggccccaaagga
gacaggggtgagccgggcatcaaaggcgaccggggagagcctggacagaggggtcagaat
ggcagcccgggtctgccaggagagcgcggcgtggctgggcctgaggggaagccgggtctg
caaggtccacgggggaccccaggcccagcgggtggccacggagaccctggaccgcccggg
gccccgggtcttgctggccctgcgggaccccagggaccttctggcctaaagggggagcct
ggagagacaggaccaccaggacggggcctgcctggacctactggagccgtgggacttccc
gggccccctggcccttcaggcctggtgggtcctcaaggggcaccgggtttgcccggacaa
gtgggggagacagggaagccgggagcgccgggtcgtgatggtgccaccgggaaagatgga
gacagaggagcccccggcgtgccggggtcgccaggtctgcccggccctgtcggacctaaa
ggagagccgggacccatggggacccctggacaggctgtggtcgggccccctggagcaaag
ggagagaagggcgcccctggagcccttgctggagacctggtgggagagccgggagccaaa
ggtgaccgaggactgccgggaccgcggggcgagaagggtgaagccggccgtgcgggggag
cctggagaccctggcgaagatggtcagaagggggctccaggacccaaaggtcacaagggc
gacccaggagttggggtccaggggccccctgggccagttggtccgccaggtctaaaggga
gactcaggcccccccggaccccccggacctcctggtattgtggggttccctggtcagaca
ggccttcgaggagagcaggggcagccgggccccactggagagcggggtttggcaggcgcc
ccagggagagagggagccccaggtcccttggggccgcctggaccacctgggtcagcggga
gcacctggggcccctggactcaaaggagacaagggggacactggagcagggctgcctggg
gcccgaggcgagcgtggggagcctggtgtccggggtgaagatgggcgccccggcctggag
ggaccccgaggactcgcgggccccccaggcagccggggagaacgtggggagaagggtgac
cctggtgcctcaggactgaagggtgacaagggcgactcagctgtgattttggggcctccg
gggccacggggtgccaagggggactcgggtgaacgagggcctcggggaatagatggtgag
aaagggcctcggggagacagcggggaacctggagagaagggcaccaagggagagcctggt
gacaagggctcagctgggctgctgggagcgcgtggactcacgggacccaagggtgagcct
ggcgccccagggatccccggcgaaccgggatccccaggaaaagacggagtccctggtgtc
cgaggagacaaaggagatattggcttcatgggtccccggggcctcaagggtgaacgggga
attaagggagcctgtggccttgatggagagaagggagataagggagaggctggtcccccg
ggccgcccagggctggcaggacgcaaaggcgagctgggggagccgggtgttccagggcag
gcaggggcccctgggaaggagggcctgatcggtcccaagggtgaccgaggtttcgatggg
cagccaggacccaagggtgaccagggcgagaaaggggagcggggacccccaggagtgggg
ggcttcccaggtcccaggggcaatgatggctctagtggtcctcccgggccgcctggcagc
attggtcccaaaggccctgaaggacttcagggtcagaagggtgagcgaggtccccctgga
cagagcgtggtgggcacccccggggcccctggaacccctggagagagaggggagcagggg
cggccaggccccgcggggccccgcggtgagaagggagaagctgcgctgacggaggatgac
atacggggccttgtgcgtcaggagatgagtcagcattgcgcctgtcagggccagtatatc
gcatctggatcacggcctctcccgagttacgcagcagacaccgctgggccgcagctccac
cccgtgcctgtgctccgagtgtcccacgcagaggaggatggccaggtgccccccgaggac
gatgagtatgaatactctgagtattccgaggaggaataccaggaccccgcagctccttgg
gatgacgatgatccctgttcgcttccactggacgagggttcctgcagcgcctacaccctg
cgctggtatcatcgggctggggcagggggcacgaaggcctgtcaccccttcgtctacggt
ggctgcggagggaacgccaaccgttttgggacccgggaggcctgtgagcaccgctgcctg
ccccaggcggcccacagtcaagggacaggtgctgcccagagctga
DBGET
integrated database retrieval system
