Budorcas taxicolor (takin): 128057793 Help Entry 128057793         CDS       T08909                                  Symbol COL4A1 Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism btax  Budorcas taxicolor (takin) Pathway btax04151   PI3K-Akt signaling pathway btax04382   Cornified envelope formation btax04510   Focal adhesion btax04512   ECM-receptor interaction btax04518   Integrin signaling btax04820   Cytoskeleton in muscle cells btax04926   Relaxin signaling pathway btax04933   AGE-RAGE signaling pathway in diabetic complications btax04974   Protein digestion and absorption btax05146   Amoebiasis btax05165   Human papillomavirus infection btax05200   Pathways in cancer btax05222   Small cell lung cancer Brite KEGG Orthology (KO) [BR:btax00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     128057793 (COL4A1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     128057793 (COL4A1)    04518 Integrin signaling     128057793 (COL4A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     128057793 (COL4A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     128057793 (COL4A1)  09150 Organismal Systems   09152 Endocrine system    04926 Relaxin signaling pathway     128057793 (COL4A1)   09154 Digestive system    04974 Protein digestion and absorption     128057793 (COL4A1)   09158 Development and regeneration    04382 Cornified envelope formation     128057793 (COL4A1)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     128057793 (COL4A1)   09162 Cancer: specific types    05222 Small cell lung cancer     128057793 (COL4A1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     128057793 (COL4A1)   09174 Infectious disease: parasitic    05146 Amoebiasis     128057793 (COL4A1)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     128057793 (COL4A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:btax04147]     128057793 (COL4A1)    00536 Glycosaminoglycan binding proteins [BR:btax00536]     128057793 (COL4A1) Exosome [BR:btax04147]  Exosomal proteins   Exosomal proteins of other cancer cells    128057793 (COL4A1) Glycosaminoglycan binding proteins [BR:btax00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    128057793 (COL4A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  128057793 NCBI-ProteinID:  XP_052506254 LinkDB All DBs Position 12:complement(85083859..85211399) Genome browser AA seq 1669 aa AA seqDB search MGPRLGVWLLLGLAALLLHEESSRAAAKGGCAGSGCGKCDCHGVKGQKGERGLPGLQGVI GFPGMQGPEGPQGPPGQKGDTGEPGLPGTKGTRGPSGVPGYPGNPGLPGIPGQDGPPGPP GIPGCNGTKGERGPAGPPGLPGYAGNPGPPGLPGMKGDPGEILGHIPGTLLKGERGYPGQ PGAPGSPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGLSFQGPKGEKGDQGVSGPP GLPGQAQVITKGDTAMRGEKGQKGEPGFPGLQGFGEKGEPGKPGPRGKPGKDGEKGEKGS QGFPGDSGYPGQPGREGLKGEKGEAGPPGLPGTVIGTGPLGEKGEPGYPGGPGAKGETGP KGFPGIPGQPGPPGFPTPGLIGAPGFPGDRGEKGEPGLPGASLPGPSGRDGLPGPPGPPG PPGQPGHTNGLVECQPGPPGDQGPPGIPGQPGLTGEVGEKGQKGDSCLVCDTTELRGPPG PQGPPGEIGFPGQPGAKGDRGLPGRDGLEGTPGPQGAPGLMGQPGAKGEPGEIYFDIRLK GDKGDPGLPGQPGMPGRAGSPGRDGQPGLPGPRGSPGSVGLKGERGPPGGVGFPGSRGDI GPPGPPGFGPIGPIGDKGQMGFPGNPGAPGQPGPKGEAGKVVPLPGPPGAEGLPGSPGFQ GPQGDRGFPGSPGRPGLPGEKGAIGQPGIGFPGPPGPKGVDGLPGDAGPPGNPGRQGFNG LPGNPGPPGQKGEPGVGLPGLKGLPGIPGIPGTPGEKGNVGGPGVPGEHGAIGPPGLQGL RGDPGPPGLQGPKGAPGVPGIGPPGAMGPPGGQGPPGSSGPPGVKGEKGFPGFPGLDMPG PKGDKGSQGLPGLTGQSGLPGLPGQQGSPGQPGIPGPKGEMGVMGTPGQPGSPGPAGVPG LPGAKGDHGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMDKVDMGSMKGEKGDQGERGQTG PAGDKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGVSGIPGAPGLPGPKGSTGGMGLPG MPGPKGVAGIPGPQGIPGLPGDKGAKGEKGQAGLPGIGIPGRPGEKGDQGLAGFPGSPGE KGEKGSTGIPGMPGAPGPKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGIKGEAGLPGK PGPTGPAGQKGEPGSDGIPGSVGEKGEAGLPGRGFPGFPGSKGEKGSKGDVGFPGLAGSP GIPGSKGEQGFMGPPGPQGQPGLPGTPGHAVEGPKGDRGPQGQPGLPGHPGPMGPPGLPG LDGLKGDKGNPGWPGTPGAPGPKGDPGFQGMPGIGGSPGITGAKGDMGPPGVPGFHGQKG APGLQGVKGDQGDQGFPGTKGLPGPPGPPGPFNIIKGEPGLPGPEGPAGLKGLQGPPGPK GQQGVTGSAGLPGPPGEPGFDGAPGQKGETGPFGPPGPRGFPGPPGPDGLPGSMGPPGTP SVDHGFLVTRHSQTTDDPQCPPGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTM PFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPITGENIRPFISRCAVCEAPAMVMAV HSQTIQIPQCPAGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRG TCNYYANAYSFWLATIERSEMFKKPTPSTLKAGELRTHVSRCQVCMRRT NT seq 5010 nt NT seq  +upstreamnt  +downstreamnt atggggccccggctcggcgtgtggctgctgctggggctcgccgcgctcctgctccacgag gagagcagccgggccgccgcgaagggtgggtgtgctggctctggctgcgggaagtgtgac tgccatggcgtgaaaggacagaagggagaaagaggcctcccggggttacaaggggtcatc ggctttcccggaatgcaaggacccgaggggccgcagggaccaccgggacagaagggtgac accggcgagcccggactgccaggcactaaagggacgagaggaccctcaggagtgcctggt taccctggaaacccaggacttcctggtattcctggccaggacggtcctccgggtccccca ggtattccaggatgtaacgggacaaagggtgagagagggcccgcgggacctcccggtttg cctggatatgccggaaatcccggaccaccagggttaccgggaatgaagggagatccaggt gagattctgggccatataccagggaccctactgaaaggcgaaagaggatatcctggacag ccgggagcgcctggttcaccaggtctgccaggtctgcaaggccccgtcgggcccccagga ttcaccgggccaccaggccctccaggccctcctggccctccaggcgaaaaggggcaaatg ggcttgagctttcaagggccgaaaggtgaaaagggtgatcaaggggtcagcgggcccccg ggattaccaggacaggctcaagtcatcacgaaaggggacacagccatgcgcggcgagaag ggtcaaaaaggtgaacccggatttccggggctgcaagggtttggagagaaaggagaacct ggaaaaccagggccccgcggaaaaccaggaaaagatggtgaaaaaggagaaaaagggagt caagggtttccgggcgattcagggtacccaggacagccaggccgagaaggtttaaaggga gagaaaggtgaagcaggtcctcccgggctgcctggaactgttattggcacaggacccttg ggagagaaaggagagcccgggtacccagggggcccaggggcgaaaggggagacaggtccc aaaggtttcccaggaataccaggccagccaggccctccaggcttcccaactccagggctg attggtgcccccggcttccccggcgacagaggagagaagggtgaaccgggcttgccgggc gcgtcgctgccgggacccagcggaagggacgggcttcccggcccccccgggccccccggg ccccctgggcagccgggccacacaaatggactcgtggaatgccagcctgggccgccaggg gaccagggtcctcccggaattccagggcagccagggttgacgggcgaagttggagaaaaa ggtcaaaaaggagacagctgcctcgtctgtgacacaacagagcttcgtgggcccccaggg ccacagggaccccccggagaaataggtttcccaggacaaccaggggccaagggagacaga ggcttacccggcagggatggtctggaaggaacgcctggtcctcaaggtgcgccagggctc atgggccagccgggagccaagggcgagcccggcgagatctacttcgacatacggctcaag ggagacaaaggagaccccggcttaccaggccagcccggcatgccaggcagagcgggctcc cctggaagagacggccaaccgggccttcccggccccagaggctccccgggttccgtagga ttgaaaggggagcgtggccccccgggaggcgtcggattccccgggagccgtggcgacatc ggccctccggggcctccaggcttcggcccgattggccccattggtgacaaaggacaaatg ggcttcccaggaaaccctggggccccaggccagccaggtcccaagggagaggcgggaaaa gtcgtgcccttgcccggcccccctggagcagaaggacttcccgggtcccccggcttccag gggccacaaggtgaccgaggttttcctggaagccccggaaggccaggcctccccggagag aagggcgccatcggccagcctgggattggatttcctgggcctcccggccccaaaggcgtt gatggtttacctggagacgctggacctcctgggaatccgggtcgtcaaggcttcaacggc ttacctggcaaccccggtccacctggccagaagggcgagcctggagtcggtctgccggga ctcaaaggcctgcctgggatacctggcatccctggcacccccggggagaagggaaacgtc ggaggaccgggcgttcctggagagcacggcgccatcggccccccaggcctccaggggctc agaggtgacccaggacctcctggattgcaaggccccaagggagctccgggagtccctgga atcggcccccctggagcaatgggcccccccggaggacagggacccccagggtcatcaggc ccccctggagtgaaaggagagaaaggcttccccggcttcccaggtctggacatgccgggc cccaaaggagacaaagggtcccaggggctccccggcctgacggggcagtcggggctgcct ggccttcctggacagcagggctcccccggccagcctggcattccaggtcccaagggagag atgggagtcatggggactccggggcagcccggctcgccaggaccagcgggcgtgccagga ttgccgggtgccaaaggggaccacggcttcccaggctcttcaggacccaggggagaccct ggcttcaagggtgacaaaggcgacgtggggctccccggcaagccaggctccatggataag gtggacatgggcagcatgaagggcgagaagggggaccaaggcgagagaggacagactggt ccggctggcgataaaggatcccgcggagacccgggaaccccaggcgtaccgggcaaggac ggtcaggcaggacaccccgggcagccaggacctaaaggtgatccaggtgtgagcgggatc cctggtgctccgggacttcctggtcccaaaggatccactggtggaatgggcctcccagga atgccaggaccaaaaggtgtggctggcatccccggcccgcagggcattcctggcttacct ggagacaagggggcaaaaggagagaaagggcaggcaggtctgcctggcattgggattcca ggacggcctggggagaagggagaccagggccttgcaggatttcccggaagccccggcgag aagggagagaaaggaagcacggggatcccagggatgcccggggctccgggccccaaaggc tccccgggcagtgttggctatccgggaagccctgggttgcctggggagaaaggtgacaag ggcctcccgggactggatggcattcctggtatcaaaggagaagcaggtcttcctgggaag cctggccccacgggcccagccggccagaaaggggagcccggcagcgatggaatcccaggg tcggtgggagagaagggcgaggcaggtctacctggcagaggattcccagggtttccaggg agcaaaggagagaaaggttcaaagggcgatgtgggcttcccaggattagccgggagccca ggaattcctggatccaagggagaacaaggattcatgggtcccccgggaccacagggacag ccgggattgccagggaccccaggccacgcggtagaggggcccaaaggagaccgcggcccg caaggacaacccggcctgccagggcatccgggacccatggggcctccaggcctccccggg ctcgatgggctgaaaggtgacaaggggaacccaggctggccgggcactccgggagctcca gggcccaagggagacccaggattccagggcatgccgggcattggcggctctccaggaatc acaggagctaagggagatatgggacccccaggagttccagggtttcacggtcagaaaggc gcccccggcctgcagggagtcaaaggtgaccaaggagaccaaggcttcccgggaacgaaa ggtcttcccggccccccgggccccccaggtccgttcaacatcatcaagggggaaccaggg ctccctggtcccgagggccccgcgggtctgaaagggcttcagggacctccaggcccaaaa ggacagcaaggtgtgacgggatccgcgggcttgcctgggcccccaggtgagcctggcttt gacggcgcccccggccagaaaggagagacggggcccttcggccctccaggtccacgaggc ttcccgggtcctcccggccctgacgggctgccggggtccatgggtcccccgggcaccccg tcagtcgatcacggtttccttgtgacccggcacagtcagacgacagacgacccccagtgc cctcctgggaccaaaatcctctaccacggctactctttgctctacgtgcaaggcaacgag cgggcacacggccaggacttgggcacggcgggcagctgcctgcggaagttcagcaccatg cccttcctcttctgcaacatcaacaacgtctgcaacttcgcctcccgcaacgactactcg tactggctgtccacgccggagcccatgcccatgtccatggcgcccatcaccggggagaac atccggcccttcatcagcaggtgtgctgtgtgtgaggccccagcgatggtgatggccgtg cacagccagaccatccagattccgcagtgccccgccggctggtcctcgctctggatcggc tactcctttgtgatgcacaccagcgccggggctgaaggctctggccaagccctcgcctcc cccggctcgtgtctggaggagttcagaagcgcccccttcatcgagtgccacggccgagga acttgcaattactacgcaaacgcttacagcttttggcttgccacgatagagcggagcgag atgttcaagaagcccacgccgtccacgctgaaggccggggagctgcgcacgcacgtcagc cggtgccaggtgtgcatgcggaggacatga

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