Budorcas taxicolor (takin): 128059199
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Entry
128059199 CDS
T08909
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG5-like
KO
K11125
protein SMG5
Organism
btax
Budorcas taxicolor (takin)
Pathway
btax03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
btax00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128059199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btax03019
]
128059199
03032 DNA replication proteins [BR:
btax03032
]
128059199
Messenger RNA biogenesis [BR:
btax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
128059199
mRNA cycle factors
Common to processing body (P body) and stress granule
128059199
DNA replication proteins [BR:
btax03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
128059199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Pox_Ag35
Motif
Other DBs
NCBI-GeneID:
128059199
NCBI-ProteinID:
XP_052507541
LinkDB
All DBs
Position
14:complement(67756139..67759090)
Genome browser
AA seq
983 aa
AA seq
DB search
MESSQVEALKARLLYQDVCRAAQRLDHFLLKGNAHEELFKPHVLALRDMVQQVCIKLMFL
HPVDYGRKAEELLWRKTYSDVALLLLKPDRKNTDSSEEQWEGPLRAHLKGGLRFYEHLFL
FLQEHYQLGLWSYIDWPHSAIRFIGCKRAGPASEEEVDWARMACHRCLLYLGDLFRFQNE
FLALHTTDLAERCYYGALSVAPHMGMPFNQLGALTGSKYYGVEATYFYQRCLHSEVPFKG
ASWNLKRLYHHAGKRYSRLKRYQGKKLSPSQRQCWDNKRLLVSFLYLQSLLQPKRKFRAT
RLMALCQLVLEDFRLCLSYRPCPSDQSQASRERKPARGYQFLPDLLIFHMVVLCLMSVHS
LRTVGSKQHRTAVTFTLTLFSHLIQHVTTRLQAELQKGNIFPEVDVPRDKENQQKMEAGA
GQQDALAPSPGPHRSKSQKTHRSSHVSSEGDNPEASFHCCCDWDETDEDENTSLCSQVSS
ELSSETTYSDTTDDEESGSLNPQAMQEGGAKSKDRISPPRDKLKTCQPPSHLLGLLKTTS
SASLSAPSSHKLPGKHGFHLAPVFSHSFLMPPSPASSKASVTEDGVSSCLETEPPADCNL
GQNTPISQPCSNLQTIQKKLQVLSAEGLLPTVKVILGWLRANCSLLTTHWWSLFGLWDHL
SMLLNLLPSVRDLQEPGLGLSHHLHELLQSCKGPHLPQFLQLPEDIVLGQHWLQQASQER
AGLEQDPPPLSSQDEAAVRVCFLRSFGHFATTLPGQFLKYDSHSGVFVSTGFEGPDNPSQ
QLLEKTSRIRFFKDIVQLWLQREVVLLEKTLRHIQIQSALTPYLFPDPRALCEHLPVIRQ
LATSGQFLLIIPNIVVDILYILRREDKRASAAITFLEGELKRGNQYLLCQSCVSVTLMRP
RMTRPDSDAWDLYNMLDFCRGLLDSSWLGAPDHRTMMTILTGICLDNPRNLSYPLQLVLG
MATEAGVEVKNVLRFYRKWKMVS
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atggagagcagccaggtagaagccctgaaggccagactcctctaccaggatgtttgcagg
gcagctcagcgtctcgaccatttccttctaaaaggaaatgcccacgaagagcttttcaag
cctcatgtcctggccctcagggatatggtccagcaagtctgcattaaactcatgttcctg
cacccagtggattatgggaggaaagcagaagagctgctctggaggaaaacgtactccgac
gtggctctgctgctgctgaagcccgacagaaaaaacacggactcctccgaggaacagtgg
gaaggccccctgcgggcgcatctgaagggtggcctcaggttctatgaacaccttttcctg
ttcctgcaggagcactaccagctgggcttgtggagctacatcgactggcctcacagtgcc
atccgcttcatcggctgcaaaagagcggggcctgcgtcagaggaagaggtggactgggcg
cggatggcctgtcaccgctgcctgctgtacctgggagacttgttccgctttcagaatgag
ttcttggccctgcacaccacggacctggcagagaggtgttattacggagccctgtcagtg
gcaccacacatgggcatgcccttcaaccagctgggagctctcacagggagcaagtactat
ggtgtggaagccacatacttctaccagcgctgcctccactcggaagtgccttttaaaggg
gcgtcttggaacctcaaacgactctaccatcatgcgggaaaaagatacagccggctgaag
aggtaccaggggaagaagctctctcccagccagaggcagtgttgggataacaaaaggtta
ctggttagcttcctctaccttcagagtctcttgcagcctaagaggaaattcagagccacc
aggctcatggccttgtgtcagctggttctggaagacttccgtctctgtctttcctatcgg
ccctgcccatctgaccagagccaggcctccagagagagaaagcccgcaagaggctaccag
ttcctccctgacctcctcatcttccacatggtggtcctctgcctcatgagtgtgcacagc
ctgaggacagtgggctccaagcagcacaggacagcggtcaccttcaccttgacccttttc
tcccatttaattcaacacgtgacaactcgcctccaggctgaactccagaaagggaacatc
ttcccagaggtggacgttcccagggacaaggaaaaccaacagaagatggaggctggggcg
gggcaacaagatgctctagccccctcccctgggccccaccgcagcaaatctcagaaaacc
cacaggtcatctcacgtttccagtgagggtgacaacccagaagccagttttcattgttgc
tgtgactgggatgagacagatgaagatgaaaacacatccttatgctcacaggtcagctca
gaactcagcagtgaaaccacttattcagacacaactgatgatgaggaaagtggctccctg
aatccacaagcaatgcaggagggtggagccaaatccaaagatagaatttcccctcccagg
gataagctgaagacgtgtcaacctcccagtcatctcctaggtctcttaaaaacaaccagt
tccgctagcctgtcagccccatcgagccacaagcttccaggcaaacatggctttcacttg
gctcctgtcttcagccacagtttcctgatgcctcctagtcctgcctccagcaaagcatct
gtcacagaggatggcgtgagcagctgtcttgagacagagcctcctgctgactgcaacttg
gggcagaacacccccatcagccaaccctgcagcaatctccagaccattcagaagaaactg
caggtcctctctgcagaggggctgctgcccacggtcaaggtgatactgggctggctccgc
gccaactgcagtctcctcaccacacattggtggagcctgtttggcctgtgggaccacctg
tccatgctgctgaacctgctgccctctgtgcgagaccttcaggagccaggcctaggcctg
tcccaccatctccatgagctactgcagagctgcaagggcccacaccttccccagttcctg
cagctcccagaggacattgtcctgggccagcactggctgcagcaggcttcccaggagaga
gcaggcttggagcaggacccacctccactcagctcccaagatgaagctgctgtgcgcgtc
tgtttcctcagaagctttggccacttcgccacgacactccctggacagtttctgaagtat
gactctcattcaggggtctttgtgagcactgggtttgaaggaccagacaacccatctcag
cagttgctagagaaaacttccaggatcagatttttcaaagacatagtacaactgtggctt
caacgtgaagtggtactgctggagaagactctcaggcacattcagattcagtcagctttg
accccttacctgttccctgacccccgggccctctgtgagcacctgccagtcatccggcag
cttgccaccagtggtcagtttctcctcatcatacccaacattgtggtggacatattgtat
atcctgagaagggaggacaagcgggcttcagcagccatcaccttcctagagggggagctg
aagagagggaaccagtaccttctctgccagtcctgtgtgtctgtgacgttgatgagaccc
agaatgaccaggccagactctgatgcctgggacctctataacatgcttgacttctgcaga
ggtctgctggactcatcctggctgggggcccctgaccacaggactatgatgaccatcctc
acgggcatctgtttagacaaccctaggaatctctcataccccctgcagctggtgctgggg
atggcaactgaagctggtgtggaagtcaagaatgtcctgcgcttctacaggaagtggaag
atggtcagctga
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