Budorcas taxicolor (takin): 128061397
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Entry
128061397 CDS
T08909
Symbol
RC3H1
Name
(RefSeq) roquin-1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
btax
Budorcas taxicolor (takin)
Brite
KEGG Orthology (KO) [BR:
btax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
btax03000
]
128061397 (RC3H1)
04121 Ubiquitin system [BR:
btax04121
]
128061397 (RC3H1)
Transcription factors [BR:
btax03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
128061397 (RC3H1)
Ubiquitin system [BR:
btax04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128061397 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
FYVE
zf_CCCH_4
zf-CCCH_4
Vesi_VP2
PaaA_PaaC
Baculo_IE-1
zf-RING_4
zf-RING_6
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
128061397
NCBI-ProteinID:
XP_052509665
LinkDB
All DBs
Position
16:complement(56164815..56231855)
Genome browser
AA seq
1133 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQQPITLCSGVEDTKHYEEAKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGTDQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSTAILPEE
GAVDLPSRKTPALPNGIVSSGNTVTQLIPRGTDPSYESSLKPGKIDHLSSSAPGSPPDLL
ESVPKSISALPVNPHPVPPRGPTELPPMPVTKPLQMVARGSQLYPAQQADVYYQDPRGAA
PPFEPAPYQQGMYYPPPPQCVSRFVRPPPSAPEPGAPYLDHYPPYLQDRVVNSQYGTQPQ
QYPPMYPPHYDGRRVYPAQSYAREEIFRESPIPIEIPPAAVPPYVPEPRERYQQMEGYYP
VAPHPTQIRPSYNRELPYSRLPPPPQPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSP
TLPPTFHQEEFLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAAGSVEM
MNVESKGMRDQRLDLQRRAAETSDDDLIPFGDRPTVSRFGAISRTSKTIYQGAGPMQAMA
PQGAPTKSINISDYGPYGTHGGWGGSPYSPHQNIPSQGHFSERERISISEVASHGKPLPS
AEREQLRLELQQLNHQISQQTQLRGLEAVSNRLVLQREANTLAGQSQPPPPPPPKWPGMI
SSEQLSLELHQVEREIGKRTRELSMENQCSLDMKSKLNTSKQAENGQPEPQNKVPAEDLT
LTFSDVPNGSALTQENISLLSNKTSSLNLSEDPEGGGDNNDSQRSGVTSSSTP
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacagtggacggatttcctctcctgcccaatttgcactcagact
tttgacgaaacaattagaaagcccatcagtttgggttgtggccatactgtctgcaagatg
tgcctgaacaaactccaccgcaaggcttgcccatttgaccagaccactatcaatacagac
attgaactcctcccagtgaactcagcattgttgcagctagtgggtgctcaggttcctgag
cagcagcccattactttgtgtagtggcgttgaagatacaaagcattatgaggaagccaag
aaatgtgtagaagaattagcactgtacctgaaaccactcagcagtgctagaggagtgggt
ctgaatagtactactcagagtgttctgagtcgcccaatgcagaggaagctagtgacgctg
gtccactgccaactagtggaagaagaaggcaggattcgtgccatgagggcagctcgatct
ttaggtgaacgaacagttacagagctcattctccaacaccagaatcctcagcaactctct
tctaatctttgggcagcagtcagagctagaggctgccagttcctcggaccagccatgcag
gaggaagccctaaagctggttctcctggccttagaagatggttctgctttgtctagaaaa
gtattggttctctttgtggtgcaaagattggaaccacggtttcctcaagcctctaaaact
agcattgggcatgttgtccagctcctttatagagcctcctgcttcaaggtcaccaaacgt
gatgaagactcttctttgatgcagctgaaagaagaatttagaacctatgaagctctgcgg
cgagaacatgactcccagatagtgcagattgctatggaagcaggcttgcgaattgcacca
gaccagtggtcctctttgctgtatggggaccaatctcacaaatctcatatgcagtccatt
attgacaagttgcagaccccagcctcttttgcacaaagtgttcaggaactaacaattgct
ctccagcggactggagatccagcaaacttgaatcgactaagaccccatttggagctatta
gcaaacattgaccctagtccagatgctcctcctcctacttgggaacagctagaaaatggg
ttggttgctgtgcgtacagtggtacatgggctggttgattatatccagaatcacagcaaa
aaaggaacagatcaacagcagcctccacagcatagcaaatataaaacatacatgtgtcga
gacatgaagcagagaggaggatgccctcggggggccagctgtacatttgcacactcacag
gaggaactggaaaaatttcgtaaaatgaacaaacgcctggttcccagaagacccctgagt
gcctctttgggtcaacttaatgaggtgggcctgccttcaacagctatccttccggaagaa
ggggcagtggatctgcctagcagaaaaacccctgctctgccaaatgggattgtatcatca
gggaatacagtaacacaactgattccacgagggacagaccccagctacgagtccagtctg
aaaccaggaaagatcgatcacctgagcagtagtgcccctgggtcccctcctgacctgcta
gaatcagtccctaagagtatttctgccttgcctgttaatccacatcctgtacctccaaga
ggaccaacagagctgccccctatgcctgtcactaaacctcttcagatggtggcgcgaggt
tctcagctctatccagcacagcaggctgatgtttattaccaggatcctcgaggagccgct
ccgccgtttgaaccagcaccttatcagcagggtatgtactatccaccaccaccacagtgt
gtgtcccgttttgtccgacctccaccatctgctcctgaacctggtgctccctacttggat
cattatccgccatacctccaagatcgtgtagtaaactcacagtatggcacacagccacaa
cagtacccacctatgtacccaccacactatgatggccgtcgagtataccctgctcagtct
tatgcaagagaggagattttccgagaaagtcctatacccattgagattccacctgcagca
gtgccaccctatgtaccagaacccagagaaagatatcaacaaatggaaggttactatcca
gtggctccacacccaactcagatcagaccttcatacaacagagagcttccgtacagtcgg
cttccgcctcctccccagccccatcctagtctagatgagctacatcgaagacgaaaggaa
ataatggcacagctagaagaaaggaaggttatctctccacctccctttgcaccttcacca
acattgcctcctaccttccatcaggaggagtttttggatgaagacttgaaggtagctggg
aaatacaaaggaaatgattatagccagtattcaccctggtcatgtgacactattggctcc
tacattggaaccaaagatgcaaaacctaaagatgttgtggcagcagggagtgtggaaatg
atgaatgtggagagtaaaggaatgagagaccagcgattggaccttcagagaagagcagca
gaaaccagtgatgatgatctcatcccatttggagaccgaccaacagtatctcggtttggt
gccatttctcgaacttccaaaacgatatatcagggtgctggcccaatgcaggccatggca
cctcagggagctccgacaaaatctattaacatttcagattatggtccatatggaacccat
ggtggctggggaggttctccatattctcctcatcaaaacataccttctcagggacacttc
agtgagagggagagaatatctatatcagaagtggctagtcatggaaaaccccttccgtct
gctgagagggaacagctacgactagaattacagcaactaaaccatcaaattagccaacag
acccagctacgtggactagaggctgttagtaacagactggtgttgcagagggaggcgaac
accttggcaggccagtcacagcccccaccaccaccacctccaaaatggcctggaatgatc
tcaagtgagcagttgagcttggaactgcaccaggtggaaagggaaattgggaagagaacc
cgggaactgagtatggagaaccagtgttctctggacatgaaaagcaaattgaatacaagt
aagcaagcagaaaatggacaaccagaaccacaaaataaggttccagctgaggaccttacg
ttgacattcagtgacgtgcctaatggatcagcattgacacaagagaatatcagcctcctg
tccaacaagaccagctctctgaacctgtcagaggaccctgagggaggaggggacaataat
gactcccagagatcaggagttacatccagttctactccctaa
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integrated database retrieval system
