Budorcas taxicolor (takin): 128062807
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Entry
128062807 CDS
T08909
Symbol
SMG9
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG9 isoform X1
KO
K18735
protein SMG9
Organism
btax
Budorcas taxicolor (takin)
Brite
KEGG Orthology (KO) [BR:
btax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btax03019
]
128062807 (SMG9)
Messenger RNA biogenesis [BR:
btax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
128062807 (SMG9)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg8_Smg9
DUF6079_1st
AAA_30
Motif
Other DBs
NCBI-GeneID:
128062807
NCBI-ProteinID:
XP_052511195
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Position
18:complement(53237362..53257728)
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AA seq
520 aa
AA seq
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MSESGHSQPGLYGIERRRRWKEPGPGGPQNLSGPGGRERDYIAPWERERRDGSEETSTAV
MQKTPIILSKPPAERSKQPPPPAAPAAPPAPAPLEKPIVLMKPREEGKGPAATTSASTPE
GTAPPPPAAPVPPKGEKEGQRPTQPVYQIQNRGMGTAAPAAMDPVVGQAKLLPPERMKHS
IKLVDDQMNWCDSAIEYLLDQTDVLVVGVLGLQGTGKSMVMSLLSANTPEEDQRAYVFRA
QSAEMKERGGNQTSGIDFFITQERIVFLDTQPILSPSILDHLINNDRKLPPEYNLPHTYV
EMQSLQIAAFLFTVCHVVIVVQDWFTDLSLYRFLQTAEMVKPSTPSPSHESSSSSGSDEG
AEYYPHLVFLQNKARREDFCPRKLRQMHLMIDQLMAHSHLRYKGTLSMLQCNVFPGLPPD
FLDSEVNLFLMPFMDSETESETPPRAGPGSSPLFSLLPGYRGHPSFQSLVSKLRSQVMSM
ARPQLSHTILTEKNWFHYAARIWDGVKKSSALAEYSRLLA
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagtctgggcacagtcagccagggctctatgggatagagaggcggcggcgctgg
aaggagccaggccctggcggcccccagaatctctccgggcccggaggtcgggagagggac
tacatcgcaccctgggaaagagagagacgggatggcagcgaagagactagcacggcggtc
atgcagaaaacccccatcatcctctcaaagcctccagcagagcggtcaaagcagcccccg
cctccagcagcccctgccgccccacctgccccggcccctctggagaagcccattgtgctc
atgaagccccgggaggaggggaaagggccggcggccacaacgagcgcctcaacccccgag
ggcactgccccaccacccccggcagcccctgtgccacccaagggggagaaggagggccag
agacccacacagcccgtgtaccagatccagaaccggggcatgggcactgccgctccagca
gccatggaccctgtcgtgggccaggccaaactgctgcccccagagcgcatgaagcacagc
atcaagctggtggacgaccagatgaattggtgcgacagtgccattgagtacctgttggat
cagactgatgtcctggtggttggtgtcctgggcctccaggggacgggcaagtccatggtc
atgtcgttgttgtcagccaacactccggaggaggaccagagggcgtatgttttccgggcc
cagagcgccgaaatgaaggagcgagggggcaaccagaccagtggcatcgacttctttatt
acccaagagcggattgttttcctggacacacagcccatcctgagcccttccatcttggac
catctcatcaacaacgaccgcaagctgcctccagagtacaacctgccccacacctacgtt
gagatgcagtcactccagattgctgccttccttttcacggtctgccacgtggtgatagtc
gtccaggactggttcacggacctcagtctgtacaggttcctccagacagcagagatggtg
aaaccctccaccccatctcccagccacgagtccagcagctcgtcaggatccgacgaaggc
gctgagtactaccctcacctggtcttcctgcagaataaagctcgccgggaggacttctgt
ccccgcaagctacggcagatgcacctgatgatcgaccagctcatggcccactcccacctg
cggtacaagggtactctatccatgttgcagtgcaatgtcttccctgggctcccgcctgac
ttcctggactctgaggtcaacctgttcctaatgcccttcatggacagtgagacagagagt
gaaaccccacctcgcgcaggacctggttccagccccctcttctccctgctccccgggtac
cgaggccaccccagcttccagtccttggtgagcaagcttcggagccaggtgatgtccatg
gcccggccgcagctgtcacacacgatcctcaccgagaagaactggttccactatgccgcc
cggatctgggacggggtgaagaagtcctccgccctggcagagtacagccgcctgctggcc
tga
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